Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC112693.2-201ENST00000556538 232 ntBASIC0□□□□□ -2.41
USP47Q96K76 AC133485.4-201ENST00000561835 220 ntBASIC0□□□□□ -2.41
USP47Q96K76 AC092794.1-201ENST00000612734 582 ntBASIC0□□□□□ -2.41
USP47Q96K76 AC084781.2-201ENST00000615568 161 ntBASIC0□□□□□ -2.41
USP47Q96K76 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 RNA5SP214-201ENST00000363378 118 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 SNORA1.1-201ENST00000364671 133 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 SNORD114-15-201ENST00000364687 72 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 SNORA8.3-201ENST00000384679 139 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 SNORD12C-201ENST00000386307 89 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 RNY4P36-201ENST00000391116 96 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 RNU2-59P-201ENST00000410482 191 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 RNU6-938P-201ENST00000411285 103 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 RNU6-191P-201ENST00000516295 94 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 SNORD113-5-201ENST00000607261 78 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 AC104985.2-201ENST00000620598 500 ntBASIC-0.01□□□□□ -2.41
USP47Q96K76 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.02□□□□□ -2.41
USP47Q96K76 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.02□□□□□ -2.41
USP47Q96K76 SNORA36.1-201ENST00000363424 132 ntBASIC-0.02□□□□□ -2.41
USP47Q96K76 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.02□□□□□ -2.41
USP47Q96K76 RNU6-763P-201ENST00000390865 106 ntBASIC-0.02□□□□□ -2.41
USP47Q96K76 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.02□□□□□ -2.41
USP47Q96K76 RNU6-693P-201ENST00000516134 107 ntBASIC-0.02□□□□□ -2.41
USP47Q96K76 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.02□□□□□ -2.41
USP47Q96K76 AC122108.2-201ENST00000611946 526 ntBASIC-0.02□□□□□ -2.41
USP47Q96K76 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.02□□□□□ -2.41
USP47Q96K76 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.03□□□□□ -2.41
USP47Q96K76 SNORD114-31-201ENST00000363219 75 ntBASIC-0.03□□□□□ -2.41
USP47Q96K76 SNORD114-9-201ENST00000364370 72 ntBASIC-0.03□□□□□ -2.41
USP47Q96K76 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.03□□□□□ -2.41
USP47Q96K76 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.03□□□□□ -2.41
USP47Q96K76 RNA5SP496-201ENST00000391240 109 ntBASIC-0.03□□□□□ -2.41
USP47Q96K76 RPS29P24-201ENST00000486345 171 ntBASIC-0.03□□□□□ -2.41
USP47Q96K76 SNORA40.14-201ENST00000516543 86 ntBASIC-0.03□□□□□ -2.41
USP47Q96K76 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.03□□□□□ -2.41
USP47Q96K76 MIR4493-201ENST00000584016 73 ntBASIC-0.03□□□□□ -2.41
USP47Q96K76 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.03□□□□□ -2.41
USP47Q96K76 MIR30D-201ENST00000362283 70 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 RNA5SP368-201ENST00000364298 116 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 MIR644A-201ENST00000385262 94 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 SEPT7P4-201ENST00000437076 306 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 RNU6-764P-201ENST00000516396 105 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 AP001180.6-201ENST00000584918 159 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 AC096720.1-201ENST00000604441 183 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 AL138825.1-201ENST00000618587 192 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 AL606534.2-204ENST00000635008 178 ntBASIC-0.04□□□□□ -2.42
USP47Q96K76 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.05□□□□□ -2.42
USP47Q96K76 MIR563-201ENST00000385080 79 ntBASIC-0.05□□□□□ -2.42
USP47Q96K76 MT-TF-201ENST00000387314 71 ntBASIC-0.05□□□□□ -2.42
USP47Q96K76 SNORD93-201ENST00000408813 74 ntBASIC-0.05□□□□□ -2.42
USP47Q96K76 AL138752.1-201ENST00000452964 351 ntBASIC-0.05□□□□□ -2.42
USP47Q96K76 RNU6-277P-201ENST00000516272 106 ntBASIC-0.05□□□□□ -2.42
USP47Q96K76 SNORD36C-201ENST00000516733 66 ntBASIC-0.05□□□□□ -2.42
USP47Q96K76 SNORD58B-201ENST00000607313 66 ntBASIC-0.05□□□□□ -2.42
USP47Q96K76 AL021707.8-201ENST00000609428 183 ntBASIC-0.05□□□□□ -2.42
USP47Q96K76 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.05□□□□□ -2.42
USP47Q96K76 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 AC069271.1-201ENST00000445577 156 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 RNU6-469P-201ENST00000516253 101 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 RNA5SP268-201ENST00000516828 124 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 RNU4-73P-201ENST00000363164 141 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 RNU6-740P-201ENST00000364734 105 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 RNA5SP331-201ENST00000364986 107 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 SNORD77.3-201ENST00000391113 65 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 AC098614.3-201ENST00000438957 440 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 RNU2-11P-201ENST00000459191 187 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 MRPS35P2-201ENST00000508242 191 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.06□□□□□ -2.42
USP47Q96K76 AC104408.1-201ENST00000605241 170 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 U6atac.1-201ENST00000616025 117 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 AC013791.1-201ENST00000616619 62 ntBASIC-0.06□□□□□ -2.42
USP47Q96K76 SNORA72.1-201ENST00000363485 129 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 SNORD61-201ENST00000384252 73 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 RNU4-83P-201ENST00000410863 133 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 RNU6-130P-201ENST00000411112 103 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 AL512326.2-201ENST00000426359 151 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.07□□□□□ -2.42
USP47Q96K76 SNORD77.4-201ENST00000516158 81 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 RNA5SP227-201ENST00000516184 113 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 SNORA20.3-201ENST00000516880 132 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 AC100767.1-201ENST00000528178 123 ntBASIC-0.07□□□□□ -2.42
USP47Q96K76 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms