Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 MIR1302-3-201ENST00000408128 138 ntBASIC1.23□□□□□ -2.21
CCDC136Q96JN2 RNU6-613P-201ENST00000410412 108 ntBASIC1.23□□□□□ -2.21
CCDC136Q96JN2 RNU2-55P-201ENST00000411146 174 ntBASIC1.23□□□□□ -2.21
CCDC136Q96JN2 AF228730.3-201ENST00000436691 102 ntBASIC1.23□□□□□ -2.21
CCDC136Q96JN2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC136Q96JN2 Y_RNA.668-201ENST00000516233 93 ntBASIC1.23□□□□□ -2.21
CCDC136Q96JN2 AC134878.1-201ENST00000619901 243 ntBASIC1.23□□□□□ -2.21
CCDC136Q96JN2 RNU6-1335P-201ENST00000365426 107 ntBASIC1.22□□□□□ -2.21
CCDC136Q96JN2 RNU6-125P-201ENST00000384505 107 ntBASIC1.22□□□□□ -2.21
CCDC136Q96JN2 RNU2-64P-201ENST00000411315 191 ntBASIC1.22□□□□□ -2.21
CCDC136Q96JN2 RPS3AP1-201ENST00000413190 320 ntBASIC1.22□□□□□ -2.21
CCDC136Q96JN2 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
CCDC136Q96JN2 MTND1P19-201ENST00000511780 315 ntBASIC1.22□□□□□ -2.21
CCDC136Q96JN2 ACA64.5-201ENST00000516207 127 ntBASIC1.22□□□□□ -2.21
CCDC136Q96JN2 Y_RNA.673-201ENST00000516306 88 ntBASIC1.22□□□□□ -2.21
CCDC136Q96JN2 AC211469.2-201ENST00000605461 205 ntBASIC1.22□□□□□ -2.21
CCDC136Q96JN2 SNORD113.3-201ENST00000364630 78 ntBASIC1.21□□□□□ -2.22
CCDC136Q96JN2 SNORA27-201ENST00000384323 126 ntBASIC1.21□□□□□ -2.22
CCDC136Q96JN2 MIR146A-201ENST00000385201 99 ntBASIC1.21□□□□□ -2.22
CCDC136Q96JN2 RNU6-205P-201ENST00000390858 107 ntBASIC1.21□□□□□ -2.22
CCDC136Q96JN2 SNORA26-201ENST00000391286 122 ntBASIC1.21□□□□□ -2.22
CCDC136Q96JN2 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
CCDC136Q96JN2 RNA5SP255-201ENST00000516370 107 ntBASIC1.21□□□□□ -2.22
CCDC136Q96JN2 Y_RNA.23-201ENST00000362496 106 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 Y_RNA.65-201ENST00000362846 100 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 Y_RNA.308-201ENST00000365043 101 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 Y_RNA.539-201ENST00000384635 107 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 Y_RNA.556-201ENST00000384677 113 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 RNU6-913P-201ENST00000390913 95 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 SNORA40.5-201ENST00000391061 128 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 FABP5P4-201ENST00000437203 171 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 AL138752.1-201ENST00000452964 351 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 snoU13.16-201ENST00000459350 104 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 RNA5SP153-201ENST00000516498 76 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 AC097639.2-201ENST00000603159 172 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 AL353621.2-201ENST00000605340 133 ntBASIC1.2□□□□□ -2.22
CCDC136Q96JN2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC136Q96JN2 Y_RNA.269-201ENST00000364685 89 ntBASIC1.19□□□□□ -2.22
CCDC136Q96JN2 SNORA1-201ENST00000384107 130 ntBASIC1.19□□□□□ -2.22
CCDC136Q96JN2 SNORD89-201ENST00000390981 114 ntBASIC1.19□□□□□ -2.22
CCDC136Q96JN2 RNU6-493P-201ENST00000391321 108 ntBASIC1.19□□□□□ -2.22
CCDC136Q96JN2 SNORD111-201ENST00000408139 94 ntBASIC1.19□□□□□ -2.22
CCDC136Q96JN2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC136Q96JN2 MTND3P2-201ENST00000438452 342 ntBASIC1.19□□□□□ -2.22
CCDC136Q96JN2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.19□□□□□ -2.22
CCDC136Q96JN2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC136Q96JN2 RPS29P24-201ENST00000486345 171 ntBASIC1.19□□□□□ -2.22
CCDC136Q96JN2 Y_RNA.238-201ENST00000364441 102 ntBASIC1.18□□□□□ -2.22
CCDC136Q96JN2 MIR605-201ENST00000385078 83 ntBASIC1.18□□□□□ -2.22
CCDC136Q96JN2 Y_RNA.680-201ENST00000516441 93 ntBASIC1.18□□□□□ -2.22
CCDC136Q96JN2 RNU6-197P-201ENST00000516680 100 ntBASIC1.18□□□□□ -2.22
CCDC136Q96JN2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC136Q96JN2 MIR8070-201ENST00000616510 88 ntBASIC1.18□□□□□ -2.22
CCDC136Q96JN2 7SK.10-201ENST00000621414 298 ntBASIC1.18□□□□□ -2.22
CCDC136Q96JN2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC136Q96JN2 SNORD114-27-201ENST00000363766 70 ntBASIC1.17□□□□□ -2.22
CCDC136Q96JN2 Y_RNA.350-201ENST00000365409 98 ntBASIC1.17□□□□□ -2.22
CCDC136Q96JN2 RNU6-574P-201ENST00000384265 107 ntBASIC1.17□□□□□ -2.22
CCDC136Q96JN2 AL035398.1-201ENST00000430869 322 ntBASIC1.17□□□□□ -2.22
CCDC136Q96JN2 HMGN1P33-201ENST00000432945 451 ntBASIC1.17□□□□□ -2.22
CCDC136Q96JN2 snoU13.21-201ENST00000459368 105 ntBASIC1.17□□□□□ -2.22
CCDC136Q96JN2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC136Q96JN2 MIR3128-201ENST00000581957 66 ntBASIC1.17□□□□□ -2.22
CCDC136Q96JN2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.16□□□□□ -2.22
CCDC136Q96JN2 RNU6-923P-201ENST00000364753 107 ntBASIC1.16□□□□□ -2.22
CCDC136Q96JN2 SNORA25.9-201ENST00000365087 128 ntBASIC1.16□□□□□ -2.22
CCDC136Q96JN2 RNY4P28-201ENST00000365281 93 ntBASIC1.16□□□□□ -2.22
CCDC136Q96JN2 AL078595.1-201ENST00000404458 226 ntBASIC1.16□□□□□ -2.22
CCDC136Q96JN2 RNA5SP102-201ENST00000516865 106 ntBASIC1.16□□□□□ -2.22
CCDC136Q96JN2 AC062037.2-201ENST00000610137 73 ntBASIC1.16□□□□□ -2.22
CCDC136Q96JN2 MIR376A2-201ENST00000636782 80 ntBASIC1.16□□□□□ -2.22
CCDC136Q96JN2 AC023934.1-201ENST00000574529 2389 ntBASIC1.16□□□□□ -2.22
CCDC136Q96JN2 MIR342-201ENST00000362212 99 ntBASIC1.15□□□□□ -2.23
CCDC136Q96JN2 Y_RNA.60-201ENST00000362831 98 ntBASIC1.15□□□□□ -2.23
CCDC136Q96JN2 RNU6-728P-201ENST00000365375 104 ntBASIC1.15□□□□□ -2.23
CCDC136Q96JN2 RNU6-1190P-201ENST00000410811 104 ntBASIC1.15□□□□□ -2.23
CCDC136Q96JN2 RNU7-73P-201ENST00000458743 63 ntBASIC1.15□□□□□ -2.23
CCDC136Q96JN2 MIR4503-201ENST00000582187 83 ntBASIC1.15□□□□□ -2.23
CCDC136Q96JN2 AP000753.3-201ENST00000604083 169 ntBASIC1.15□□□□□ -2.23
CCDC136Q96JN2 RNU2-4P-201ENST00000606190 192 ntBASIC1.15□□□□□ -2.23
CCDC136Q96JN2 U4.1-201ENST00000620349 87 ntBASIC1.15□□□□□ -2.23
CCDC136Q96JN2 Y_RNA.7-201ENST00000362352 102 ntBASIC1.14□□□□□ -2.23
CCDC136Q96JN2 RNU6-103P-201ENST00000363686 107 ntBASIC1.14□□□□□ -2.23
CCDC136Q96JN2 RNU6-1189P-201ENST00000383958 107 ntBASIC1.14□□□□□ -2.23
CCDC136Q96JN2 MT-TN-201ENST00000387400 73 ntBASIC1.14□□□□□ -2.23
CCDC136Q96JN2 SNORD77.3-201ENST00000391113 65 ntBASIC1.14□□□□□ -2.23
CCDC136Q96JN2 AC067940.1-201ENST00000458411 300 ntBASIC1.14□□□□□ -2.23
CCDC136Q96JN2 MIR3129-201ENST00000581095 76 ntBASIC1.14□□□□□ -2.23
CCDC136Q96JN2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC136Q96JN2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC136Q96JN2 MIR96-201ENST00000362288 78 ntBASIC1.13□□□□□ -2.23
CCDC136Q96JN2 Y_RNA.20-201ENST00000362479 113 ntBASIC1.13□□□□□ -2.23
CCDC136Q96JN2 Y_RNA.440-201ENST00000384120 114 ntBASIC1.13□□□□□ -2.23
CCDC136Q96JN2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.13□□□□□ -2.23
CCDC136Q96JN2 AC244023.1-201ENST00000426884 112 ntBASIC1.13□□□□□ -2.23
CCDC136Q96JN2 AC015818.7-201ENST00000428754 109 ntBASIC1.13□□□□□ -2.23
CCDC136Q96JN2 AC087499.7-201ENST00000441958 109 ntBASIC1.13□□□□□ -2.23
CCDC136Q96JN2 AL121914.1-201ENST00000450188 156 ntBASIC1.13□□□□□ -2.23
CCDC136Q96JN2 RNU2-11P-201ENST00000459191 187 ntBASIC1.13□□□□□ -2.23
CCDC136Q96JN2 RNU7-53P-201ENST00000516705 60 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms