Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 RNY1P16-201ENST00000363063 111 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 RNU6-636P-201ENST00000384598 107 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 RNU6-455P-201ENST00000384681 107 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 MIR518F-201ENST00000384973 87 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 MIRLET7B-201ENST00000385140 83 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 POLR3GP1-201ENST00000594073 261 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 AC132825.6-201ENST00000638861 357 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 AC091304.10-201ENST00000641554 121 ntBASIC-0.42□□□□□ -2.48
TTC28Q96AY4 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNU4-24P-201ENST00000364565 139 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 MIR215-201ENST00000384858 110 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 MIR147A-201ENST00000385079 72 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNU2-51P-201ENST00000410708 197 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNU6-329P-201ENST00000459618 107 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNU6-469P-201ENST00000516253 101 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNA5SP47-201ENST00000517230 109 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNU6-324P-201ENST00000363957 106 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 Y_RNA.266-201ENST00000364678 96 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 MIR617-201ENST00000385030 97 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 FCF1P9-201ENST00000412546 282 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 EIF1P2-201ENST00000428233 350 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.43□□□□□ -2.48
TTC28Q96AY4 MTND2P22-201ENST00000444325 1033 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.43□□□□□ -2.48
TTC28Q96AY4 U8.19-201ENST00000459095 133 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 U8.22-201ENST00000459141 133 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNU2-11P-201ENST00000459191 187 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 RNU2-13P-201ENST00000515909 113 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 MIR4280-201ENST00000582178 76 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 Z97988.1-201ENST00000637697 135 ntBASIC-0.43□□□□□ -2.48
TTC28Q96AY4 SNORD50.1-201ENST00000362987 71 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 RNU6-767P-201ENST00000384132 107 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 RNU6-456P-201ENST00000384493 107 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 MTCYBP8-201ENST00000422855 651 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 snoU109.3-201ENST00000459477 145 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 RNU6-436P-201ENST00000516171 114 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 MIR4509-3-201ENST00000578671 94 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 MIR4509-2-201ENST00000583920 94 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 MIR4509-1-201ENST00000618224 94 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 AC007494.3-201ENST00000624660 743 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 AC099654.12-201ENST00000639868 649 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 SNORD14E-201ENST00000364009 85 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 SNORD114-29-201ENST00000364819 70 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 SNORA75.4-201ENST00000391278 119 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 snoU13.10-201ENST00000459301 103 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 SNORA40.9-201ENST00000515895 93 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 SNORA25.10-201ENST00000515926 124 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 AP000676.1-201ENST00000533307 52 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.44□□□□□ -2.48
TTC28Q96AY4 MIR5696-201ENST00000578474 85 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 MIR4752-201ENST00000579672 72 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 MIR4491-201ENST00000581087 68 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 AC007671.2-201ENST00000637344 619 ntBASIC-0.44□□□□□ -2.48
TTC28Q96AY4 MIR655-201ENST00000362159 97 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 SNORA1-201ENST00000384107 130 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
TTC28Q96AY4 AC022137.1-201ENST00000483735 151 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.45□□□□□ -2.48
TTC28Q96AY4 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 AC005609.4-201ENST00000625071 447 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 MT-TF-201ENST00000387314 71 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 AL356010.1-201ENST00000456364 102 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.45□□□□□ -2.48
TTC28Q96AY4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.45□□□□□ -2.48
TTC28Q96AY4 AP001506.1-201ENST00000615444 211 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.45□□□□□ -2.48
TTC28Q96AY4 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 SNORA26.5-201ENST00000391215 123 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 SNORD110-201ENST00000408189 75 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 AL354751.2-201ENST00000415471 210 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 BX295541.1-201ENST00000417774 250 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 MTND3P21-201ENST00000433774 331 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 MTCO1P29-201ENST00000496868 288 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.46□□□□□ -2.48
TTC28Q96AY4 MIR548AM-201ENST00000584298 74 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 AC125232.2-201ENST00000592457 143 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 DISC2.1-201ENST00000612827 205 ntBASIC-0.46□□□□□ -2.48
TTC28Q96AY4 AL391262.2-201ENST00000622466 494 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms