Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 Y_RNA.306-201ENST00000365015 102 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.312-201ENST00000365089 102 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.322-201ENST00000365151 102 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 RNU6-484P-201ENST00000384016 107 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 RNU6-713P-201ENST00000384761 107 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 MIR520H-201ENST00000385126 88 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 RNU6-1109P-201ENST00000391187 107 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 RNU2-70P-201ENST00000410718 179 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.650-201ENST00000459002 102 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.777-201ENST00000516982 102 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 RNU6-570P-201ENST00000517051 105 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.771-201ENST00000598668 102 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 U2.14-201ENST00000615943 113 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 AP001282.2-201ENST00000616149 309 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.789-201ENST00000622480 102 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
VPS33AQ96AX1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
VPS33AQ96AX1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VPS33AQ96AX1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VPS33AQ96AX1 SNORA1.1-201ENST00000364671 133 ntBASIC0.57□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.634-201ENST00000364811 113 ntBASIC0.57□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.432-201ENST00000384087 111 ntBASIC0.57□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.572-201ENST00000384757 98 ntBASIC0.57□□□□□ -2.32
VPS33AQ96AX1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS33AQ96AX1 RNU6-998P-201ENST00000515894 101 ntBASIC0.57□□□□□ -2.32
VPS33AQ96AX1 MIR4804-201ENST00000581683 73 ntBASIC0.57□□□□□ -2.32
VPS33AQ96AX1 MIR4676-201ENST00000583078 72 ntBASIC0.57□□□□□ -2.32
VPS33AQ96AX1 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
VPS33AQ96AX1 MIR335-201ENST00000362173 94 ntBASIC0.56□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.117-201ENST00000363294 101 ntBASIC0.56□□□□□ -2.32
VPS33AQ96AX1 RNU6-1227P-201ENST00000383981 107 ntBASIC0.56□□□□□ -2.32
VPS33AQ96AX1 SNORA36.2-201ENST00000384004 127 ntBASIC0.56□□□□□ -2.32
VPS33AQ96AX1 SNORD77.3-201ENST00000391113 65 ntBASIC0.56□□□□□ -2.32
VPS33AQ96AX1 MIR548I3-201ENST00000408378 149 ntBASIC0.56□□□□□ -2.32
VPS33AQ96AX1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.56□□□□□ -2.32
VPS33AQ96AX1 RN7SKP12-201ENST00000516275 143 ntBASIC0.56□□□□□ -2.32
VPS33AQ96AX1 RNU6-740P-201ENST00000364734 105 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 MIR140-201ENST00000385282 100 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 MIR616-201ENST00000385293 97 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 RNU6-1228P-201ENST00000391014 107 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 AF228730.3-201ENST00000436691 102 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS33AQ96AX1 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 MIR6740-201ENST00000618268 113 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 U6.104-201ENST00000637979 90 ntBASIC0.55□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.11-201ENST00000362375 109 ntBASIC0.54□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.91-201ENST00000363042 107 ntBASIC0.54□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.237-201ENST00000364439 102 ntBASIC0.54□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.422-201ENST00000384054 114 ntBASIC0.54□□□□□ -2.32
VPS33AQ96AX1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.54□□□□□ -2.32
VPS33AQ96AX1 RNU6-602P-201ENST00000411155 105 ntBASIC0.54□□□□□ -2.32
VPS33AQ96AX1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS33AQ96AX1 snoU13.2-201ENST00000459201 104 ntBASIC0.54□□□□□ -2.32
VPS33AQ96AX1 AC020891.4-201ENST00000605745 93 ntBASIC0.54□□□□□ -2.32
VPS33AQ96AX1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.53□□□□□ -2.32
VPS33AQ96AX1 MIR588-201ENST00000384900 83 ntBASIC0.53□□□□□ -2.32
VPS33AQ96AX1 MIR938-201ENST00000401216 83 ntBASIC0.53□□□□□ -2.32
VPS33AQ96AX1 RNU6-1165P-201ENST00000410119 107 ntBASIC0.53□□□□□ -2.32
VPS33AQ96AX1 HMGN1P33-201ENST00000432945 451 ntBASIC0.53□□□□□ -2.32
VPS33AQ96AX1 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
VPS33AQ96AX1 RNU7-56P-201ENST00000458744 62 ntBASIC0.53□□□□□ -2.32
VPS33AQ96AX1 RNU2-11P-201ENST00000459191 187 ntBASIC0.53□□□□□ -2.32
VPS33AQ96AX1 AC010332.2-201ENST00000613083 1904 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 Y_RNA.304-201ENST00000365011 112 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 AL606845.1-201ENST00000404881 255 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 Y_RNA.590-201ENST00000410140 107 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 AC015818.7-201ENST00000428754 109 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 AC087499.7-201ENST00000441958 109 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 SNRPGP8-201ENST00000454064 226 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 CYP3A137P-201ENST00000562436 69 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS33AQ96AX1 MIR3612-201ENST00000579753 87 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 MIR4282-201ENST00000583613 67 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 uc_338.6-201ENST00000613544 171 ntBASIC0.52□□□□□ -2.33
VPS33AQ96AX1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
VPS33AQ96AX1 MIR18A-201ENST00000362310 71 ntBASIC0.51□□□□□ -2.33
VPS33AQ96AX1 MIR563-201ENST00000385080 79 ntBASIC0.51□□□□□ -2.33
VPS33AQ96AX1 MT-TF-201ENST00000387314 71 ntBASIC0.51□□□□□ -2.33
VPS33AQ96AX1 MT-TT-201ENST00000387460 66 ntBASIC0.51□□□□□ -2.33
VPS33AQ96AX1 RNA5SP261-201ENST00000410536 106 ntBASIC0.51□□□□□ -2.33
VPS33AQ96AX1 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
VPS33AQ96AX1 snoU2_19.4-201ENST00000364329 80 ntBASIC0.5□□□□□ -2.33
VPS33AQ96AX1 Y_RNA.354-201ENST00000365448 111 ntBASIC0.5□□□□□ -2.33
VPS33AQ96AX1 RNY1P8-201ENST00000383970 114 ntBASIC0.5□□□□□ -2.33
VPS33AQ96AX1 Y_RNA.518-201ENST00000384552 113 ntBASIC0.5□□□□□ -2.33
VPS33AQ96AX1 Y_RNA.542-201ENST00000384641 111 ntBASIC0.5□□□□□ -2.33
VPS33AQ96AX1 MIR1257-201ENST00000408490 117 ntBASIC0.5□□□□□ -2.33
VPS33AQ96AX1 Y_RNA.622-201ENST00000411091 108 ntBASIC0.5□□□□□ -2.33
VPS33AQ96AX1 AL138752.1-201ENST00000452964 351 ntBASIC0.5□□□□□ -2.33
VPS33AQ96AX1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
VPS33AQ96AX1 RNU6-1309P-201ENST00000363305 108 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 412.8 ms