Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 Y_RNA.537-201ENST00000384626 109 ntBASIC1.63□□□□□ -2.15
HPS3Q969F9 Y_RNA.555-201ENST00000384673 110 ntBASIC1.63□□□□□ -2.15
HPS3Q969F9 SNORD28B-201ENST00000390993 75 ntBASIC1.63□□□□□ -2.15
HPS3Q969F9 AC009474.2-201ENST00000451383 136 ntBASIC1.63□□□□□ -2.15
HPS3Q969F9 AC023790.1-201ENST00000482174 347 ntBASIC1.63□□□□□ -2.15
HPS3Q969F9 CYP3A52P-201ENST00000563326 91 ntBASIC1.63□□□□□ -2.15
HPS3Q969F9 AC008133.2-201ENST00000624540 351 ntBASIC1.63□□□□□ -2.15
HPS3Q969F9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.63□□□□□ -2.15
HPS3Q969F9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HPS3Q969F9 RNA5SP48-201ENST00000363969 126 ntBASIC1.62□□□□□ -2.15
HPS3Q969F9 SNORD77.3-201ENST00000391113 65 ntBASIC1.62□□□□□ -2.15
HPS3Q969F9 RNA5SP127-201ENST00000411051 133 ntBASIC1.62□□□□□ -2.15
HPS3Q969F9 RNU5E-9P-201ENST00000411164 104 ntBASIC1.62□□□□□ -2.15
HPS3Q969F9 AC074198.2-201ENST00000508153 258 ntBASIC1.62□□□□□ -2.15
HPS3Q969F9 RNA5SP61-201ENST00000516453 100 ntBASIC1.62□□□□□ -2.15
HPS3Q969F9 SNORD36C-201ENST00000516733 66 ntBASIC1.62□□□□□ -2.15
HPS3Q969F9 AC090821.2-201ENST00000523552 176 ntBASIC1.62□□□□□ -2.15
HPS3Q969F9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.62□□□□□ -2.15
HPS3Q969F9 Y_RNA.272-201ENST00000364696 102 ntBASIC1.61□□□□□ -2.15
HPS3Q969F9 SNORA27-201ENST00000384323 126 ntBASIC1.61□□□□□ -2.15
HPS3Q969F9 SNORA51.10-201ENST00000384418 136 ntBASIC1.61□□□□□ -2.15
HPS3Q969F9 SNORA67.6-201ENST00000391093 99 ntBASIC1.61□□□□□ -2.15
HPS3Q969F9 RNU6-938P-201ENST00000411285 103 ntBASIC1.61□□□□□ -2.15
HPS3Q969F9 RNU7-95P-201ENST00000459222 64 ntBASIC1.61□□□□□ -2.15
HPS3Q969F9 RPS26P48-201ENST00000491713 339 ntBASIC1.61□□□□□ -2.15
HPS3Q969F9 MIR3646-201ENST00000578301 84 ntBASIC1.61□□□□□ -2.15
HPS3Q969F9 AL096861.1-201ENST00000610899 123 ntBASIC1.61□□□□□ -2.15
HPS3Q969F9 MIR6844-201ENST00000637122 62 ntBASIC1.61□□□□□ -2.15
HPS3Q969F9 Y_RNA.118-201ENST00000363300 101 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 RNU6-768P-201ENST00000384683 107 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 MIR624-201ENST00000385217 97 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 SNORD37.2-201ENST00000391075 66 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 RNU7-67P-201ENST00000459003 62 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 AL133373.1-201ENST00000497098 94 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 RNU7-121P-201ENST00000516604 62 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 RNU6-165P-201ENST00000517170 99 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 DNAJC19P2-201ENST00000593340 302 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 MIR4791-201ENST00000607666 84 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 AC243994.1-201ENST00000618627 109 ntBASIC1.6□□□□□ -2.15
HPS3Q969F9 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
HPS3Q969F9 MIR570-201ENST00000384917 97 ntBASIC1.59□□□□□ -2.15
HPS3Q969F9 MIR518E-201ENST00000385252 88 ntBASIC1.59□□□□□ -2.15
HPS3Q969F9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.59□□□□□ -2.15
HPS3Q969F9 RPS29P23-201ENST00000458635 123 ntBASIC1.59□□□□□ -2.15
HPS3Q969F9 RNU7-41P-201ENST00000515917 61 ntBASIC1.59□□□□□ -2.15
HPS3Q969F9 MIR5197-201ENST00000583721 112 ntBASIC1.59□□□□□ -2.15
HPS3Q969F9 MIR3192-201ENST00000584920 77 ntBASIC1.59□□□□□ -2.15
HPS3Q969F9 MIR4251-201ENST00000635819 61 ntBASIC1.59□□□□□ -2.15
HPS3Q969F9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HPS3Q969F9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
HPS3Q969F9 SNORA75.5-201ENST00000391291 81 ntBASIC1.58□□□□□ -2.16
HPS3Q969F9 RPS29P29-201ENST00000456396 171 ntBASIC1.58□□□□□ -2.16
HPS3Q969F9 RNU1-98P-201ENST00000458992 160 ntBASIC1.58□□□□□ -2.16
HPS3Q969F9 RPS29P24-201ENST00000486345 171 ntBASIC1.58□□□□□ -2.16
HPS3Q969F9 RNU2-13P-201ENST00000515909 113 ntBASIC1.58□□□□□ -2.16
HPS3Q969F9 SNORA31.24-201ENST00000517232 57 ntBASIC1.58□□□□□ -2.16
HPS3Q969F9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
HPS3Q969F9 Y_RNA.180-201ENST00000363867 113 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 RNU6-449P-201ENST00000383914 107 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 Y_RNA.440-201ENST00000384120 114 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 RNU7-96P-201ENST00000459535 64 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 RNU7-80P-201ENST00000459562 61 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 RNU7-53P-201ENST00000516705 60 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 RNU7-70P-201ENST00000516941 66 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 AC104465.1-201ENST00000611365 139 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.57□□□□□ -2.16
HPS3Q969F9 RNU6-818P-201ENST00000364837 108 ntBASIC1.56□□□□□ -2.16
HPS3Q969F9 Y_RNA.454-201ENST00000384224 113 ntBASIC1.56□□□□□ -2.16
HPS3Q969F9 Y_RNA.494-201ENST00000384432 111 ntBASIC1.56□□□□□ -2.16
HPS3Q969F9 PCNPP3-201ENST00000393579 471 ntBASIC1.56□□□□□ -2.16
HPS3Q969F9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.56□□□□□ -2.16
HPS3Q969F9 RNU6-394P-201ENST00000410735 107 ntBASIC1.56□□□□□ -2.16
HPS3Q969F9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.56□□□□□ -2.16
HPS3Q969F9 SNORA31.4-201ENST00000516049 129 ntBASIC1.56□□□□□ -2.16
HPS3Q969F9 Y_RNA.116-201ENST00000363292 103 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 RNU6-392P-201ENST00000364926 101 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 SNORA24-201ENST00000384096 131 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 Y_RNA.580-201ENST00000391004 95 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 AL035398.1-201ENST00000430869 322 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 AC245047.7-201ENST00000440265 293 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 snoU13.16-201ENST00000459350 104 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 SNORA31.2-201ENST00000516019 134 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 RNU6-958P-201ENST00000516995 106 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.55□□□□□ -2.16
HPS3Q969F9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.55□□□□□ -2.16
HPS3Q969F9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
HPS3Q969F9 MIR302B-201ENST00000362188 73 ntBASIC1.54□□□□□ -2.16
HPS3Q969F9 Y_RNA.355-201ENST00000365462 98 ntBASIC1.54□□□□□ -2.16
HPS3Q969F9 MIR3144-201ENST00000579460 79 ntBASIC1.54□□□□□ -2.16
HPS3Q969F9 MTND1P7-201ENST00000632801 297 ntBASIC1.54□□□□□ -2.16
HPS3Q969F9 MIR342-201ENST00000362212 99 ntBASIC1.53□□□□□ -2.16
HPS3Q969F9 Y_RNA.8-201ENST00000362353 102 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 198.5 ms