Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 SNORD42.2-201ENST00000365570 69 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 RNU6-514P-201ENST00000384208 107 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 MT-TD-201ENST00000387419 68 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 SNORA40.8-201ENST00000411034 126 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 SNORD71-201ENST00000411292 86 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 RNA5SP94-201ENST00000516917 108 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 RNU6-365P-201ENST00000517113 106 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 RNU6-1270P-201ENST00000517128 108 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 AC100767.1-201ENST00000528178 123 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.21□□□□□ -2.38
UFD1Q92890 SNORD92-201ENST00000585078 85 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 AC037487.3-201ENST00000606668 112 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 Y_RNA.804-201ENST00000615262 101 ntBASIC0.21□□□□□ -2.38
UFD1Q92890 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.21□□□□□ -2.38
UFD1Q92890 Y_RNA.31-201ENST00000362574 102 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 RNU6-888P-201ENST00000363010 101 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 RNU1-133P-201ENST00000364867 167 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 Y_RNA.394-201ENST00000383942 103 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 RNU6-662P-201ENST00000384253 104 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 MIR563-201ENST00000385080 79 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 SNORA53-201ENST00000391141 249 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 RNU6-101P-201ENST00000410323 104 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.2□□□□□ -2.38
UFD1Q92890 RNU7-156P-201ENST00000517214 74 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 AC022523.2-201ENST00000561045 150 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 AL008718.3-201ENST00000610217 321 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 Y_RNA.802-201ENST00000614892 130 ntBASIC0.2□□□□□ -2.38
UFD1Q92890 Y_RNA.217-201ENST00000364214 105 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 Y_RNA.389-201ENST00000383924 113 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 Y_RNA.541-201ENST00000384640 113 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 MT-TF-201ENST00000387314 71 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 MIR548I3-201ENST00000408378 149 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 RNU6-1190P-201ENST00000410811 104 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 SNRPGP12-201ENST00000449481 213 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 AL138752.1-201ENST00000452964 351 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 Y_RNA.641-201ENST00000459414 105 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 RNU7-96P-201ENST00000459535 64 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 Y_RNA.631-201ENST00000459607 101 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 MIR5688-201ENST00000580619 83 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 MIR4801-201ENST00000582704 82 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 uc_338.16-201ENST00000621804 95 ntBASIC0.19□□□□□ -2.38
UFD1Q92890 snoU2_19.2-201ENST00000363024 80 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 RNU4-10P-201ENST00000364383 140 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 Y_RNA.431-201ENST00000384086 102 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 RNY3P14-201ENST00000384309 102 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 SNORD77.3-201ENST00000391113 65 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 MIR936-201ENST00000401264 98 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 MIR1287-201ENST00000408492 90 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 RNU2-11P-201ENST00000459191 187 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 RNU6-998P-201ENST00000515894 101 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 RNU6-504P-201ENST00000516568 104 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 SNORA27.4-201ENST00000516650 95 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 SNORA40.15-201ENST00000516884 107 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 Y_RNA.721-201ENST00000517207 102 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 AP003733.2-201ENST00000529409 171 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.18□□□□□ -2.38
UFD1Q92890 AC006006.1-201ENST00000603082 144 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 snoU18.1-201ENST00000629629 71 ntBASIC0.18□□□□□ -2.38
UFD1Q92890 MIR30D-201ENST00000362283 70 ntBASIC0.17□□□□□ -2.38
UFD1Q92890 VTRNA1-3-201ENST00000365645 89 ntBASIC0.17□□□□□ -2.38
UFD1Q92890 Y_RNA.419-201ENST00000384041 102 ntBASIC0.17□□□□□ -2.38
UFD1Q92890 SNORD12C-201ENST00000386307 89 ntBASIC0.17□□□□□ -2.38
UFD1Q92890 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.17□□□□□ -2.38
UFD1Q92890 AF228730.3-201ENST00000436691 102 ntBASIC0.17□□□□□ -2.38
UFD1Q92890 RNU6-448P-201ENST00000517052 107 ntBASIC0.17□□□□□ -2.38
UFD1Q92890 SNORA25.18-201ENST00000607153 114 ntBASIC0.17□□□□□ -2.38
UFD1Q92890 Y_RNA.7-201ENST00000362352 102 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 Y_RNA.66-201ENST00000362862 102 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 SNORD118-201ENST00000363593 134 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 RNA5SP117-201ENST00000365294 118 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 Y_RNA.380-201ENST00000365663 111 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 SNORA8.2-201ENST00000384372 139 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 MIR215-201ENST00000384858 110 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 AL731563.1-201ENST00000442202 214 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.16□□□□□ -2.38
UFD1Q92890 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.16□□□□□ -2.38
UFD1Q92890 MIR4711-201ENST00000578274 70 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 MIR3678-201ENST00000578455 94 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
UFD1Q92890 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 Y_RNA.24-201ENST00000362508 103 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 Y_RNA.28-201ENST00000362554 111 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 RNA5SP62-201ENST00000363457 110 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 Y_RNA.229-201ENST00000364347 113 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 Y_RNA.238-201ENST00000364441 102 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 Y_RNA.410-201ENST00000383992 113 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 SNORA8.3-201ENST00000384679 139 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 SNORA26-201ENST00000391286 122 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 RPL21P38-201ENST00000418090 167 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 ELOCP20-201ENST00000422460 345 ntBASIC0.15□□□□□ -2.39
UFD1Q92890 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.15□□□□□ -2.39
UFD1Q92890 UBE2WP1-201ENST00000362030 340 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 Y_RNA.122-201ENST00000363331 96 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 RNU6-770P-201ENST00000363929 105 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 Y_RNA.226-201ENST00000364337 114 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 RNU6-1189P-201ENST00000383958 107 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 Y_RNA.440-201ENST00000384120 114 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 Y_RNA.567-201ENST00000384736 106 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms