Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.31□□□□□ -2.62
AP3S1Q92572 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.31□□□□□ -2.62
AP3S1Q92572 MTND2P9-201ENST00000422293 931 ntBASIC-1.31□□□□□ -2.62
AP3S1Q92572 MTATP6P23-201ENST00000440153 476 ntBASIC-1.31□□□□□ -2.62
AP3S1Q92572 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.31□□□□□ -2.62
AP3S1Q92572 RNU6-273P-201ENST00000516937 96 ntBASIC-1.31□□□□□ -2.62
AP3S1Q92572 AC073648.5-201ENST00000603502 305 ntBASIC-1.31□□□□□ -2.62
AP3S1Q92572 AC087752.4-201ENST00000605911 462 ntBASIC-1.31□□□□□ -2.62
AP3S1Q92572 U6.109-201ENST00000636749 87 ntBASIC-1.31□□□□□ -2.62
AP3S1Q92572 SNORD114-25-201ENST00000363742 72 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 SNORA18-201ENST00000384416 132 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 RNA5SP25-201ENST00000410815 110 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 RNU7-141P-201ENST00000459304 62 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 DEFB117-201ENST00000602356 141 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 MIR1244-1-201ENST00000612829 85 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 MIR1244-3-201ENST00000635744 85 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 MIR1244-2-201ENST00000636449 85 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 MIR1244-4-202ENST00000636813 85 ntBASIC-1.32□□□□□ -2.62
AP3S1Q92572 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 RNU4-36P-201ENST00000364294 144 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 MIR539-201ENST00000365690 78 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 MIR1265-201ENST00000408444 86 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 RNU2-14P-201ENST00000411053 191 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 AC023449.1-201ENST00000454464 154 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 RNU1-54P-201ENST00000517181 120 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.33□□□□□ -2.62
AP3S1Q92572 MIR4280-201ENST00000582178 76 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 MIR3942-201ENST00000585264 109 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 uc_338.10-201ENST00000621872 182 ntBASIC-1.33□□□□□ -2.62
AP3S1Q92572 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.34□□□□□ -2.62
AP3S1Q92572 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.34□□□□□ -2.62
AP3S1Q92572 MIR635-201ENST00000384830 98 ntBASIC-1.34□□□□□ -2.62
AP3S1Q92572 RNA5SP261-201ENST00000410536 106 ntBASIC-1.34□□□□□ -2.62
AP3S1Q92572 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.34□□□□□ -2.62
AP3S1Q92572 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.34□□□□□ -2.62
AP3S1Q92572 MIR6128-201ENST00000615528 109 ntBASIC-1.34□□□□□ -2.62
AP3S1Q92572 AC011476.5-201ENST00000615594 130 ntBASIC-1.34□□□□□ -2.62
AP3S1Q92572 AC022960.3-201ENST00000619794 441 ntBASIC-1.34□□□□□ -2.62
AP3S1Q92572 AC068137.3-201ENST00000639191 341 ntBASIC-1.34□□□□□ -2.62
AP3S1Q92572 SNORD114-29-201ENST00000364819 70 ntBASIC-1.35□□□□□ -2.63
AP3S1Q92572 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.35□□□□□ -2.63
AP3S1Q92572 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.35□□□□□ -2.63
AP3S1Q92572 SNORD61-201ENST00000384252 73 ntBASIC-1.35□□□□□ -2.63
AP3S1Q92572 SNORD5.1-201ENST00000458800 75 ntBASIC-1.35□□□□□ -2.63
AP3S1Q92572 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.35□□□□□ -2.63
AP3S1Q92572 AP000676.1-201ENST00000533307 52 ntBASIC-1.35□□□□□ -2.63
AP3S1Q92572 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.35□□□□□ -2.63
AP3S1Q92572 AL049861.1-201ENST00000603130 150 ntBASIC-1.35□□□□□ -2.63
AP3S1Q92572 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.35□□□□□ -2.63
AP3S1Q92572 RNU1-141P-201ENST00000364623 158 ntBASIC-1.36□□□□□ -2.63
AP3S1Q92572 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.36□□□□□ -2.63
AP3S1Q92572 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
AP3S1Q92572 RNU6-721P-201ENST00000410155 105 ntBASIC-1.36□□□□□ -2.63
AP3S1Q92572 AF228730.3-201ENST00000436691 102 ntBASIC-1.36□□□□□ -2.63
AP3S1Q92572 SNORD11.1-201ENST00000459482 85 ntBASIC-1.36□□□□□ -2.63
AP3S1Q92572 MIR548AE1-201ENST00000583292 70 ntBASIC-1.36□□□□□ -2.63
AP3S1Q92572 MIR6851-201ENST00000617060 67 ntBASIC-1.36□□□□□ -2.63
AP3S1Q92572 SNORD114-15-201ENST00000364687 72 ntBASIC-1.37□□□□□ -2.63
AP3S1Q92572 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.37□□□□□ -2.63
AP3S1Q92572 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.37□□□□□ -2.63
AP3S1Q92572 AC009094.1-201ENST00000564443 426 ntBASIC-1.37□□□□□ -2.63
AP3S1Q92572 MIR3145-201ENST00000580727 82 ntBASIC-1.37□□□□□ -2.63
AP3S1Q92572 MIR3920-201ENST00000581751 86 ntBASIC-1.37□□□□□ -2.63
AP3S1Q92572 RNY1P2-201ENST00000364820 117 ntBASIC-1.38□□□□□ -2.63
AP3S1Q92572 MIR599-201ENST00000385069 95 ntBASIC-1.38□□□□□ -2.63
AP3S1Q92572 AL603914.1-201ENST00000401964 204 ntBASIC-1.38□□□□□ -2.63
AP3S1Q92572 MTND4P28-201ENST00000426217 387 ntBASIC-1.38□□□□□ -2.63
AP3S1Q92572 MTND1P2-201ENST00000430604 821 ntBASIC-1.38□□□□□ -2.63
AP3S1Q92572 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.38□□□□□ -2.63
AP3S1Q92572 YWHAEP2-201ENST00000580066 112 ntBASIC-1.38□□□□□ -2.63
AP3S1Q92572 MIR548AX-201ENST00000580117 73 ntBASIC-1.38□□□□□ -2.63
AP3S1Q92572 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 RNU6-900P-201ENST00000384498 102 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 MTND2P22-201ENST00000444325 1033 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 MIR2355-201ENST00000517199 87 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 RN7SKP295-201ENST00000517264 153 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.39□□□□□ -2.63
AP3S1Q92572 MIR548H5-201ENST00000580314 60 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 MIR6841-201ENST00000637129 72 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 MTND5P18-201ENST00000445624 1801 ntBASIC-1.39□□□□□ -2.63
AP3S1Q92572 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.4□□□□□ -2.63
AP3S1Q92572 RNU6-154P-201ENST00000384306 106 ntBASIC-1.4□□□□□ -2.63
AP3S1Q92572 RNU6-383P-201ENST00000410864 94 ntBASIC-1.4□□□□□ -2.63
AP3S1Q92572 MTND3P12-201ENST00000559068 328 ntBASIC-1.4□□□□□ -2.63
AP3S1Q92572 AL021707.8-201ENST00000609428 183 ntBASIC-1.4□□□□□ -2.63
AP3S1Q92572 DISC2.1-201ENST00000612827 205 ntBASIC-1.4□□□□□ -2.63
AP3S1Q92572 AC092794.2-201ENST00000620933 563 ntBASIC-1.4□□□□□ -2.63
AP3S1Q92572 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.4□□□□□ -2.63
AP3S1Q92572 SNORA22.1-201ENST00000362701 134 ntBASIC-1.41□□□□□ -2.64
AP3S1Q92572 SNORD81.1-201ENST00000363064 77 ntBASIC-1.41□□□□□ -2.64
AP3S1Q92572 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.41□□□□□ -2.64
AP3S1Q92572 SNORD115-44-201ENST00000365391 82 ntBASIC-1.41□□□□□ -2.64
AP3S1Q92572 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms