Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MIR4264-201ENST00000583520 66 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-40-201ENST00000606510 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 MIR8055-201ENST00000610739 97 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.66-201ENST00000362862 102 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.152-201ENST00000363578 100 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.276-201ENST00000364732 109 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 MIR526A2-201ENST00000390198 65 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-177P-201ENST00000411257 104 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 SERF1AP1-201ENST00000514575 187 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-1153P-201ENST00000516760 105 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 AC018659.1-201ENST00000551083 169 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 AP001094.1-201ENST00000579805 193 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 AC008608.1-201ENST00000603910 127 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.802-201ENST00000614892 130 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 MIR6513-201ENST00000621188 64 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 MIR376A2-201ENST00000636782 80 ntBASIC0.34□□□□□ -2.36
RTN4IP1Q8WWV3 UBE2WP1-201ENST00000362030 340 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-1309P-201ENST00000363305 108 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 snoU2_19.4-201ENST00000364329 80 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.242-201ENST00000364473 110 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 SNORA27-201ENST00000384323 126 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-1228P-201ENST00000391014 107 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-1203P-201ENST00000410703 110 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 RNU7-56P-201ENST00000458744 62 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 AC100767.1-201ENST00000528178 123 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 MIR3612-201ENST00000579753 87 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 AC006006.1-201ENST00000603082 144 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 Z97988.1-201ENST00000637697 135 ntBASIC0.33□□□□□ -2.36
RTN4IP1Q8WWV3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-888P-201ENST00000363010 101 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.275-201ENST00000364726 110 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-484P-201ENST00000384016 107 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 MIR626-201ENST00000385032 94 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 SNORD12C-201ENST00000386307 89 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 SNORA40.5-201ENST00000391061 128 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.622-201ENST00000411091 108 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-602P-201ENST00000411155 105 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 AC087499.4-201ENST00000448505 178 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 RNU7-73P-201ENST00000458743 63 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 RNU7-45P-201ENST00000459460 63 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 AC107297.1-201ENST00000459991 176 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 RPS29P24-201ENST00000486345 171 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-453P-201ENST00000516819 85 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 AC037487.3-201ENST00000606668 112 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 AP001282.2-201ENST00000616149 309 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.32□□□□□ -2.36
RTN4IP1Q8WWV3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.7-201ENST00000362352 102 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.116-201ENST00000363292 103 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-740P-201ENST00000364734 105 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-597P-201ENST00000365620 102 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 SNORD24-201ENST00000383884 75 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 SNORA8.3-201ENST00000384679 139 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 MIR588-201ENST00000384900 83 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 AC113618.1-201ENST00000416747 285 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 MTCYBP6-201ENST00000441810 138 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 AL731563.1-201ENST00000442202 214 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-365P-201ENST00000517113 106 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 MIR4662B-201ENST00000579498 81 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 AL162730.1-201ENST00000605734 292 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 MIR6734-201ENST00000621166 68 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 AC243829.3-201ENST00000622177 108 ntBASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.31□□□□□ -2.36
RTN4IP1Q8WWV3 MIR342-201ENST00000362212 99 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.237-201ENST00000364439 102 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.634-201ENST00000364811 113 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 SNORA1-201ENST00000384107 130 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 SNORD38B-201ENST00000384690 67 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-985P-201ENST00000410182 104 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 SNRPGP8-201ENST00000454064 226 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 RNU2-11P-201ENST00000459191 187 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-561P-201ENST00000516222 102 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 AL356055.1-201ENST00000602528 446 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 SNORD38B-202ENST00000625943 69 ntBASIC0.3□□□□□ -2.36
RTN4IP1Q8WWV3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.23-201ENST00000362496 106 ntBASIC0.29□□□□□ -2.36
RTN4IP1Q8WWV3 SNORA1.1-201ENST00000364671 133 ntBASIC0.29□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.304-201ENST00000365011 112 ntBASIC0.29□□□□□ -2.36
RTN4IP1Q8WWV3 SNORA33.2-201ENST00000365413 134 ntBASIC0.29□□□□□ -2.36
RTN4IP1Q8WWV3 Y_RNA.440-201ENST00000384120 114 ntBASIC0.29□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-42P-201ENST00000384165 107 ntBASIC0.29□□□□□ -2.36
RTN4IP1Q8WWV3 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
RTN4IP1Q8WWV3 SNORD77.3-201ENST00000391113 65 ntBASIC0.29□□□□□ -2.36
RTN4IP1Q8WWV3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.29□□□□□ -2.36
RTN4IP1Q8WWV3 MTND4LP30-201ENST00000454092 297 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms