Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC023790.1-201ENST00000482174 347 ntBASIC1.54□□□□□ -2.16
LMO3Q8TAP4 RPS26P48-201ENST00000491713 339 ntBASIC1.54□□□□□ -2.16
LMO3Q8TAP4 RN7SKP19-201ENST00000516016 252 ntBASIC1.54□□□□□ -2.16
LMO3Q8TAP4 RNU6-772P-201ENST00000516042 105 ntBASIC1.54□□□□□ -2.16
LMO3Q8TAP4 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
LMO3Q8TAP4 IGKV1-22-201ENST00000524313 326 ntBASIC1.54□□□□□ -2.16
LMO3Q8TAP4 MIR4529-201ENST00000578110 78 ntBASIC1.54□□□□□ -2.16
LMO3Q8TAP4 AC108081.1-201ENST00000604358 221 ntBASIC1.54□□□□□ -2.16
LMO3Q8TAP4 SNORA2.2-201ENST00000365473 135 ntBASIC1.53□□□□□ -2.16
LMO3Q8TAP4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
LMO3Q8TAP4 SNORD38C-201ENST00000384381 69 ntBASIC1.53□□□□□ -2.16
LMO3Q8TAP4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
LMO3Q8TAP4 RNU7-12P-201ENST00000516030 62 ntBASIC1.53□□□□□ -2.16
LMO3Q8TAP4 RNU6-781P-201ENST00000516377 101 ntBASIC1.53□□□□□ -2.16
LMO3Q8TAP4 RNU2-19P-201ENST00000517288 84 ntBASIC1.53□□□□□ -2.16
LMO3Q8TAP4 AP003484.1-201ENST00000530974 250 ntBASIC1.53□□□□□ -2.16
LMO3Q8TAP4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.53□□□□□ -2.16
LMO3Q8TAP4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.53□□□□□ -2.16
LMO3Q8TAP4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LMO3Q8TAP4 MIR337-201ENST00000362281 93 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 RNU6-1325P-201ENST00000364905 105 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 SNORD58C-201ENST00000365223 64 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 RNU6-429P-201ENST00000384582 108 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 RNU2-7P-201ENST00000410794 178 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 snoU13.27-201ENST00000459278 104 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 AC133485.4-201ENST00000561835 220 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 AC138907.4-201ENST00000570107 226 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 MIR4498-201ENST00000577599 66 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.52□□□□□ -2.17
LMO3Q8TAP4 AL513423.1-201ENST00000621695 132 ntBASIC1.52□□□□□ -2.17
LMO3Q8TAP4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
LMO3Q8TAP4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.51□□□□□ -2.17
LMO3Q8TAP4 RNU6-349P-201ENST00000362402 107 ntBASIC1.51□□□□□ -2.17
LMO3Q8TAP4 RNU6-1056P-201ENST00000383996 107 ntBASIC1.51□□□□□ -2.17
LMO3Q8TAP4 RNU6-1144P-201ENST00000384247 104 ntBASIC1.51□□□□□ -2.17
LMO3Q8TAP4 RNU6-1064P-201ENST00000410626 104 ntBASIC1.51□□□□□ -2.17
LMO3Q8TAP4 RNU5E-3P-201ENST00000515913 68 ntBASIC1.51□□□□□ -2.17
LMO3Q8TAP4 RNU6-919P-201ENST00000516731 104 ntBASIC1.51□□□□□ -2.17
LMO3Q8TAP4 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
LMO3Q8TAP4 AC015726.2-201ENST00000620112 122 ntBASIC1.51□□□□□ -2.17
LMO3Q8TAP4 U6.95-201ENST00000636931 70 ntBASIC1.51□□□□□ -2.17
LMO3Q8TAP4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.51□□□□□ -2.17
LMO3Q8TAP4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
LMO3Q8TAP4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.51□□□□□ -2.17
LMO3Q8TAP4 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
LMO3Q8TAP4 MIR424-201ENST00000362227 98 ntBASIC1.5□□□□□ -2.17
LMO3Q8TAP4 MIR194-1-201ENST00000384892 85 ntBASIC1.5□□□□□ -2.17
LMO3Q8TAP4 MIR660-201ENST00000385235 97 ntBASIC1.5□□□□□ -2.17
LMO3Q8TAP4 RNA5SP212-201ENST00000391223 107 ntBASIC1.5□□□□□ -2.17
LMO3Q8TAP4 U8.17-201ENST00000391292 132 ntBASIC1.5□□□□□ -2.17
LMO3Q8TAP4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.5□□□□□ -2.17
LMO3Q8TAP4 AC093850.1-201ENST00000454121 251 ntBASIC1.5□□□□□ -2.17
LMO3Q8TAP4 RNU6-1061P-201ENST00000516530 99 ntBASIC1.5□□□□□ -2.17
LMO3Q8TAP4 SNORA31.17-201ENST00000516953 127 ntBASIC1.5□□□□□ -2.17
LMO3Q8TAP4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.5□□□□□ -2.17
LMO3Q8TAP4 AL627230.6-201ENST00000611129 280 ntBASIC1.5□□□□□ -2.17
LMO3Q8TAP4 RNU6-661P-201ENST00000362409 107 ntBASIC1.49□□□□□ -2.17
LMO3Q8TAP4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.49□□□□□ -2.17
LMO3Q8TAP4 RNU6-476P-201ENST00000384726 107 ntBASIC1.49□□□□□ -2.17
LMO3Q8TAP4 AL035461.1-201ENST00000421490 332 ntBASIC1.49□□□□□ -2.17
LMO3Q8TAP4 PGBD4P5-201ENST00000445958 426 ntBASIC1.49□□□□□ -2.17
LMO3Q8TAP4 SNORA31.4-201ENST00000516049 129 ntBASIC1.49□□□□□ -2.17
LMO3Q8TAP4 AC025166.1-201ENST00000612411 163 ntBASIC1.49□□□□□ -2.17
LMO3Q8TAP4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.49□□□□□ -2.17
LMO3Q8TAP4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LMO3Q8TAP4 MIR378A-201ENST00000362177 66 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-34-201ENST00000362441 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-12-201ENST00000362583 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-29-201ENST00000362834 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-9-201ENST00000362912 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-21-201ENST00000362963 81 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-14-201ENST00000363090 81 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-13-201ENST00000363358 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-41-201ENST00000363608 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-11-201ENST00000363616 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-5-201ENST00000363633 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-39-201ENST00000363694 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-4-201ENST00000363810 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-16-201ENST00000363887 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-6-201ENST00000363942 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-42-201ENST00000364273 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-15-201ENST00000364809 81 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-1-201ENST00000364961 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-26-201ENST00000365067 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-10-201ENST00000365073 81 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-43-201ENST00000365503 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 Y_RNA.366-201ENST00000365540 102 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-36-201ENST00000365629 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORA27-201ENST00000384323 126 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 MIR452-201ENST00000385020 85 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 RNU7-80P-201ENST00000459562 61 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.48□□□□□ -2.17
LMO3Q8TAP4 RNU2-13P-201ENST00000515909 113 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 SNORD115-40-201ENST00000606510 82 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 AL137067.1-201ENST00000615933 120 ntBASIC1.48□□□□□ -2.17
LMO3Q8TAP4 MTND5P18-201ENST00000445624 1801 ntBASIC1.47□□□□□ -2.17
LMO3Q8TAP4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LMO3Q8TAP4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms