Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 SNORD36C-201ENST00000516733 66 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 RNU6-264P-201ENST00000517134 104 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 MIR4491-201ENST00000581087 68 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 AC122108.2-201ENST00000611946 526 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 AL662814.1-201ENST00000617364 121 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 AC022079.1-201ENST00000621546 602 ntBASIC-0.44□□□□□ -2.48
CCDC112Q8NEF3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 RNU4-73P-201ENST00000363164 141 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 MIR215-201ENST00000384858 110 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 MIR604-201ENST00000384880 94 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 SNORA26.6-201ENST00000391256 115 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 RNA5SP163-201ENST00000410304 99 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 RNU2-11P-201ENST00000459191 187 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 RNU2-31P-201ENST00000516954 155 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 AC103591.3-201ENST00000608684 209 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 AC010205.1-201ENST00000616668 449 ntBASIC-0.45□□□□□ -2.48
CCDC112Q8NEF3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.46□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.46□□□□□ -2.48
CCDC112Q8NEF3 RNA5SP25-201ENST00000410815 110 ntBASIC-0.46□□□□□ -2.48
CCDC112Q8NEF3 RNU4-14P-201ENST00000410858 122 ntBASIC-0.46□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.46□□□□□ -2.48
CCDC112Q8NEF3 AC010655.3-201ENST00000478818 450 ntBASIC-0.46□□□□□ -2.48
CCDC112Q8NEF3 RNU6-998P-201ENST00000515894 101 ntBASIC-0.46□□□□□ -2.48
CCDC112Q8NEF3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.46□□□□□ -2.48
CCDC112Q8NEF3 MTND5P34-201ENST00000568888 325 ntBASIC-0.46□□□□□ -2.48
CCDC112Q8NEF3 MIR6717-201ENST00000622747 73 ntBASIC-0.46□□□□□ -2.48
CCDC112Q8NEF3 MIR101-1-201ENST00000362265 75 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 RNU6-46P-201ENST00000383860 107 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 MTATP6P17-201ENST00000431030 672 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 AL160004.2-201ENST00000432935 350 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 AC023449.1-201ENST00000454464 154 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 RNU7-96P-201ENST00000459535 64 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 MIR548AD-201ENST00000584780 82 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 AC099654.14-201ENST00000638599 341 ntBASIC-0.47□□□□□ -2.48
CCDC112Q8NEF3 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 SNORD114-12-201ENST00000365400 75 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 RNU6-597P-201ENST00000365620 102 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 RNU6-535P-201ENST00000384722 107 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 RNU6-308P-201ENST00000390957 107 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 RNU6-693P-201ENST00000516134 107 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 AL049861.1-201ENST00000603130 150 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 AL133255.1-201ENST00000606374 441 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 AC011373.1-201ENST00000607270 237 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 MIR8064-201ENST00000612863 90 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 MIR3688-2-201ENST00000636963 87 ntBASIC-0.48□□□□□ -2.49
CCDC112Q8NEF3 RNU6-144P-201ENST00000383951 107 ntBASIC-0.49□□□□□ -2.49
CCDC112Q8NEF3 RNU6-310P-201ENST00000384655 107 ntBASIC-0.49□□□□□ -2.49
CCDC112Q8NEF3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.49□□□□□ -2.49
CCDC112Q8NEF3 RPL39P25-201ENST00000449384 154 ntBASIC-0.49□□□□□ -2.49
CCDC112Q8NEF3 RNU7-110P-201ENST00000516891 62 ntBASIC-0.49□□□□□ -2.49
CCDC112Q8NEF3 AC048344.4-201ENST00000619744 527 ntBASIC-0.49□□□□□ -2.49
CCDC112Q8NEF3 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 RNU4-80P-201ENST00000363200 141 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 RNU6-899P-201ENST00000363947 107 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 SNORD24-201ENST00000383884 75 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 SNORD61-201ENST00000384252 73 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 MIR628-201ENST00000385229 95 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 RNU6-383P-201ENST00000410864 94 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 AL022718.1-201ENST00000412004 84 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 AC096644.2-201ENST00000429278 159 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 SNORD77.4-201ENST00000516158 81 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 AC024909.2-201ENST00000553035 286 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 MIR3925-201ENST00000584674 77 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 AL670379.3-201ENST00000605040 251 ntBASIC-0.5□□□□□ -2.49
CCDC112Q8NEF3 RNU6-653P-201ENST00000363074 106 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 RNU6-890P-201ENST00000384121 107 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 MIR106A-201ENST00000384870 81 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 RNU4-30P-201ENST00000410245 143 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 RNA5SP237-201ENST00000410414 113 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 AC141846.1-201ENST00000568348 142 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 AC108676.2-201ENST00000605225 163 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 SNORA70.25-201ENST00000612741 95 ntBASIC-0.51□□□□□ -2.49
CCDC112Q8NEF3 RNU6-888P-201ENST00000363010 101 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 RNA5SP245-201ENST00000364239 121 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 RNU6-726P-201ENST00000364680 107 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 SNORD63-201ENST00000384262 68 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 AF228730.3-201ENST00000436691 102 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 RNU7-45P-201ENST00000459460 63 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 MIR4662B-201ENST00000579498 81 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms