Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNY3P5-201ENST00000384127 102 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 SNORD61-201ENST00000384252 73 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 SNORA51.10-201ENST00000384418 136 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 SNORA79-201ENST00000408376 140 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 Y_RNA.626-201ENST00000411288 95 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 snoU13.25-201ENST00000458945 104 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 AC107297.1-201ENST00000459991 176 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 RNU6-504P-201ENST00000516568 104 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.28□□□□□ -2.2
USP38Q8NB14 AC109810.1-201ENST00000534066 224 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 MIR4295-201ENST00000585286 85 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 AL590095.2-201ENST00000604136 117 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 RNU2-4P-201ENST00000606190 192 ntBASIC1.28□□□□□ -2.2
USP38Q8NB14 RNA5SP264-201ENST00000363115 107 ntBASIC1.27□□□□□ -2.21
USP38Q8NB14 Y_RNA.634-201ENST00000364811 113 ntBASIC1.27□□□□□ -2.21
USP38Q8NB14 RNU6-728P-201ENST00000365375 104 ntBASIC1.27□□□□□ -2.21
USP38Q8NB14 Y_RNA.363-201ENST00000365529 113 ntBASIC1.27□□□□□ -2.21
USP38Q8NB14 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.27□□□□□ -2.21
USP38Q8NB14 RNU6-561P-201ENST00000516222 102 ntBASIC1.27□□□□□ -2.21
USP38Q8NB14 RNU4-71P-201ENST00000516258 113 ntBASIC1.27□□□□□ -2.21
USP38Q8NB14 RNA5SP330-201ENST00000517096 96 ntBASIC1.27□□□□□ -2.21
USP38Q8NB14 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
USP38Q8NB14 RNA5SP62-201ENST00000363457 110 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 Y_RNA.258-201ENST00000364613 105 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 SNORA80D-201ENST00000384488 135 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
USP38Q8NB14 RNU2-55P-201ENST00000411146 174 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.26□□□□□ -2.21
USP38Q8NB14 AL121914.1-201ENST00000450188 156 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 Y_RNA.797-201ENST00000515977 94 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 AC007751.1-201ENST00000529260 376 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 CYP3A137P-201ENST00000562436 69 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 AC211469.2-201ENST00000605461 205 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 MIR4791-201ENST00000607666 84 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 AL442644.1-201ENST00000454390 3105 ntBASIC1.26□□□□□ -2.21
USP38Q8NB14 RNA5SP257-201ENST00000363023 116 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 RNU6-103P-201ENST00000363686 107 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 RNU6-484P-201ENST00000384016 107 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 Y_RNA.489-201ENST00000384410 101 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 MIR518F-201ENST00000384973 87 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 SNORD58.1-201ENST00000391313 66 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 RNU6-847P-201ENST00000411115 108 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 RNU7-67P-201ENST00000459003 62 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 SNORD79.1-201ENST00000516069 84 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 MIR4744-201ENST00000581563 82 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 AC243994.1-201ENST00000618627 109 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 AL109933.3-201ENST00000619095 188 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 AC008163.1-202ENST00000636004 2889 ntBASIC1.25□□□□□ -2.21
USP38Q8NB14 Y_RNA.7-201ENST00000362352 102 ntBASIC1.24□□□□□ -2.21
USP38Q8NB14 SNORD24-201ENST00000383884 75 ntBASIC1.24□□□□□ -2.21
USP38Q8NB14 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
USP38Q8NB14 SNORA75.2-201ENST00000391138 150 ntBASIC1.24□□□□□ -2.21
USP38Q8NB14 SNORA75.3-201ENST00000391231 150 ntBASIC1.24□□□□□ -2.21
USP38Q8NB14 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
USP38Q8NB14 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.24□□□□□ -2.21
USP38Q8NB14 RNA5SP121-201ENST00000516537 101 ntBASIC1.24□□□□□ -2.21
USP38Q8NB14 RNU6-1271P-201ENST00000517049 105 ntBASIC1.24□□□□□ -2.21
USP38Q8NB14 PRELID3BP2-201ENST00000605362 201 ntBASIC1.24□□□□□ -2.21
USP38Q8NB14 AC027335.2-201ENST00000624030 375 ntBASIC1.24□□□□□ -2.21
USP38Q8NB14 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USP38Q8NB14 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.23□□□□□ -2.21
USP38Q8NB14 Y_RNA.37-201ENST00000362606 108 ntBASIC1.23□□□□□ -2.21
USP38Q8NB14 Y_RNA.182-201ENST00000363880 111 ntBASIC1.23□□□□□ -2.21
USP38Q8NB14 Y_RNA.188-201ENST00000363952 111 ntBASIC1.23□□□□□ -2.21
USP38Q8NB14 Y_RNA.401-201ENST00000383965 117 ntBASIC1.23□□□□□ -2.21
USP38Q8NB14 RNU4-70P-201ENST00000384579 139 ntBASIC1.23□□□□□ -2.21
USP38Q8NB14 Y_RNA.537-201ENST00000384626 109 ntBASIC1.23□□□□□ -2.21
USP38Q8NB14 AC063976.4-201ENST00000421971 163 ntBASIC1.23□□□□□ -2.21
USP38Q8NB14 RNA5SP153-201ENST00000516498 76 ntBASIC1.23□□□□□ -2.21
USP38Q8NB14 AP003484.1-201ENST00000530974 250 ntBASIC1.23□□□□□ -2.21
USP38Q8NB14 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.23□□□□□ -2.21
USP38Q8NB14 RNU6-888P-201ENST00000363010 101 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 Y_RNA.494-201ENST00000384432 111 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 MIR548A2-201ENST00000384956 97 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 Y_RNA.618-201ENST00000410949 107 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 AC087499.4-201ENST00000448505 178 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 RNU6-197P-201ENST00000516680 100 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 SNORD36C-201ENST00000516733 66 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 RNU6-958P-201ENST00000516995 106 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.22□□□□□ -2.21
USP38Q8NB14 AC134878.1-201ENST00000619901 243 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 MTND1P7-201ENST00000632801 297 ntBASIC1.22□□□□□ -2.21
USP38Q8NB14 Y_RNA.66-201ENST00000362862 102 ntBASIC1.21□□□□□ -2.22
USP38Q8NB14 Y_RNA.200-201ENST00000364018 102 ntBASIC1.21□□□□□ -2.22
USP38Q8NB14 RNU6-578P-201ENST00000390980 103 ntBASIC1.21□□□□□ -2.22
USP38Q8NB14 MIR1185-1-201ENST00000408598 86 ntBASIC1.21□□□□□ -2.22
USP38Q8NB14 AF228730.3-201ENST00000436691 102 ntBASIC1.21□□□□□ -2.22
USP38Q8NB14 AC002429.1-201ENST00000437672 148 ntBASIC1.21□□□□□ -2.22
USP38Q8NB14 RPS26P48-201ENST00000491713 339 ntBASIC1.21□□□□□ -2.22
USP38Q8NB14 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.21□□□□□ -2.22
USP38Q8NB14 MIR4308-201ENST00000580634 81 ntBASIC1.21□□□□□ -2.22
USP38Q8NB14 MIR342-201ENST00000362212 99 ntBASIC1.2□□□□□ -2.22
USP38Q8NB14 Y_RNA.83-201ENST00000363005 113 ntBASIC1.2□□□□□ -2.22
USP38Q8NB14 Y_RNA.571-201ENST00000384753 98 ntBASIC1.2□□□□□ -2.22
USP38Q8NB14 MRPL35P3-201ENST00000421557 364 ntBASIC1.2□□□□□ -2.22
USP38Q8NB14 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.2□□□□□ -2.22
USP38Q8NB14 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms