Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNA5SP395-201ENST00000516567 118 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.715-201ENST00000517082 110 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 UBE2V2P2-201ENST00000587677 504 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 Z84480.1-201ENST00000605131 311 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 AC098479.1-201ENST00000609225 154 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 HULC.1-201ENST00000612720 240 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 AC004467.1-201ENST00000615678 330 ntBASIC-2.76□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.77□□□□□ -2.85
LINC00643Q86TS7 RNY3P9-201ENST00000384727 106 ntBASIC-2.77□□□□□ -2.85
LINC00643Q86TS7 RNU6-903P-201ENST00000391270 109 ntBASIC-2.77□□□□□ -2.85
LINC00643Q86TS7 RNU6-1208P-201ENST00000459588 107 ntBASIC-2.77□□□□□ -2.85
LINC00643Q86TS7 AC107027.2-201ENST00000512197 115 ntBASIC-2.77□□□□□ -2.85
LINC00643Q86TS7 MIR409-201ENST00000362237 79 ntBASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 RNU4-50P-201ENST00000364361 141 ntBASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 RNU6-571P-201ENST00000384128 107 ntBASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 RNU6-524P-201ENST00000384270 107 ntBASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 MIR1285-2-201ENST00000408311 88 ntBASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 MIR2113-201ENST00000459007 91 ntBASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 Y_RNA.809-201ENST00000516058 95 ntBASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 RNU2-31P-201ENST00000516954 155 ntBASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 AC145350.1-201ENST00000567426 208 ntBASIC-2.78□□□□□ -2.85
LINC00643Q86TS7 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.79□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.433-201ENST00000384089 102 ntBASIC-2.79□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.436-201ENST00000384097 102 ntBASIC-2.79□□□□□ -2.86
LINC00643Q86TS7 SNORA51.5-201ENST00000384126 131 ntBASIC-2.79□□□□□ -2.86
LINC00643Q86TS7 UBE2V1P12-201ENST00000503954 474 ntBASIC-2.79□□□□□ -2.86
LINC00643Q86TS7 RNU6-189P-201ENST00000516120 101 ntBASIC-2.79□□□□□ -2.86
LINC00643Q86TS7 MIR6841-201ENST00000637129 72 ntBASIC-2.79□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.8□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.366-201ENST00000365540 102 ntBASIC-2.8□□□□□ -2.86
LINC00643Q86TS7 RNU4-70P-201ENST00000384579 139 ntBASIC-2.8□□□□□ -2.86
LINC00643Q86TS7 MIR519A1-201ENST00000385257 85 ntBASIC-2.8□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.587-201ENST00000391210 103 ntBASIC-2.8□□□□□ -2.86
LINC00643Q86TS7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-2.8□□□□□ -2.86
LINC00643Q86TS7 CCDC34P1-201ENST00000507441 517 ntBASIC-2.8□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.706-201ENST00000516933 99 ntBASIC-2.8□□□□□ -2.86
LINC00643Q86TS7 MIR5692C1-201ENST00000585309 91 ntBASIC-2.8□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.106-201ENST00000363189 100 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 SNORA62.4-201ENST00000365504 151 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 SNORD116-9-201ENST00000384000 95 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 SNORD116-3-201ENST00000384287 95 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 SNORD116-8-201ENST00000384365 95 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 SNORD116-7-201ENST00000384404 95 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 SNORD116-5-201ENST00000384462 95 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 RNU7-195P-201ENST00000458793 62 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 RNU7-180P-201ENST00000459240 63 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 RNU7-115P-201ENST00000516433 55 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 AC068339.1-201ENST00000526965 141 ntBASIC-2.81□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.18-201ENST00000362461 102 ntBASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 RNU6-931P-201ENST00000363850 107 ntBASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 SNORD115-23-201ENST00000364461 82 ntBASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 SNORA20-201ENST00000384662 132 ntBASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 AC009961.2-201ENST00000435771 251 ntBASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 MTND3P7-201ENST00000474435 343 ntBASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 MTND4P7-201ENST00000523876 130 ntBASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 AC022878.1-201ENST00000530684 149 ntBASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 MIR5696-201ENST00000578474 85 ntBASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 AC091912.2-201ENST00000624798 167 ntBASIC-2.82□□□□□ -2.86
LINC00643Q86TS7 SNORA22.1-201ENST00000362701 134 ntBASIC-2.83□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.214-201ENST00000364201 112 ntBASIC-2.83□□□□□ -2.86
LINC00643Q86TS7 RNU6-879P-201ENST00000364328 108 ntBASIC-2.83□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.410-201ENST00000383992 113 ntBASIC-2.83□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.440-201ENST00000384120 114 ntBASIC-2.83□□□□□ -2.86
LINC00643Q86TS7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-2.83□□□□□ -2.86
LINC00643Q86TS7 AL008718.3-201ENST00000610217 321 ntBASIC-2.83□□□□□ -2.86
LINC00643Q86TS7 AC103705.1-201ENST00000619013 241 ntBASIC-2.83□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.14-201ENST00000362415 103 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.167-201ENST00000363735 109 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 SNORD113-7-201ENST00000363762 77 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 Y_RNA.453-201ENST00000384223 109 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 RNU7-187P-201ENST00000458985 68 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 AC097510.1-201ENST00000510945 133 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 RNU6-693P-201ENST00000516134 107 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 RNU7-149P-201ENST00000516739 59 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 AL080274.1-201ENST00000605565 220 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 MIR548AY-201ENST00000617669 107 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 AC022140.2-201ENST00000623500 188 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 AC007494.3-201ENST00000624660 743 ntBASIC-2.84□□□□□ -2.86
LINC00643Q86TS7 RNU6-1260P-201ENST00000362944 107 ntBASIC-2.85□□□□□ -2.87
LINC00643Q86TS7 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.85□□□□□ -2.87
LINC00643Q86TS7 Y_RNA.310-201ENST00000365063 113 ntBASIC-2.85□□□□□ -2.87
LINC00643Q86TS7 Y_RNA.341-201ENST00000365341 102 ntBASIC-2.85□□□□□ -2.87
LINC00643Q86TS7 RNU2-51P-201ENST00000410708 197 ntBASIC-2.85□□□□□ -2.87
LINC00643Q86TS7 RNU6-436P-201ENST00000516171 114 ntBASIC-2.85□□□□□ -2.87
LINC00643Q86TS7 RNU6-759P-201ENST00000516740 103 ntBASIC-2.85□□□□□ -2.87
LINC00643Q86TS7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-2.85□□□□□ -2.87
LINC00643Q86TS7 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-2.85□□□□□ -2.87
LINC00643Q86TS7 RNU6-501P-201ENST00000364072 100 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 MIR582-201ENST00000365731 98 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 RNU6-517P-201ENST00000384362 110 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 AL606845.1-201ENST00000404881 255 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 MIR548E-201ENST00000408287 88 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 MIR548H1-201ENST00000408610 102 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 PCMTD1P1-201ENST00000455560 355 ntBASIC-2.86□□□□□ -2.87
LINC00643Q86TS7 AC021146.9-201ENST00000512503 156 ntBASIC-2.86□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 258.1 ms