Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 RNU6-938P-201ENST00000411285 103 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 SNRPGP10-201ENST00000432323 225 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 SNRPGP14-201ENST00000435400 219 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 HMGN1P7-201ENST00000491722 313 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 SNORA31.4-201ENST00000516049 129 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 AC022523.2-201ENST00000561045 150 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 AP000942.3-201ENST00000603702 160 ntBASIC1.71□□□□□ -2.14
USP43Q70EL4 RNA5SP276-201ENST00000362580 94 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 RNU6-1099P-201ENST00000363533 107 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 SNORA33-201ENST00000363664 130 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 RNU6-414P-201ENST00000363705 104 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 RNU6-1124P-201ENST00000384169 107 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 RNU6-813P-201ENST00000384691 107 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 MIR583-201ENST00000384846 75 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 MIR548D2-201ENST00000384955 97 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 SNRPGP13-201ENST00000442212 177 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 RPL23AP6-201ENST00000446637 472 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 RNU6-341P-201ENST00000516973 96 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 AL358944.1-201ENST00000528537 144 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 AC141557.1-201ENST00000540982 400 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.7□□□□□ -2.14
USP43Q70EL4 AL359075.3-201ENST00000613288 217 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 JPX_2.1-201ENST00000614161 69 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 AC015726.2-201ENST00000620112 122 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 MIR6079-201ENST00000635807 62 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 MIR2052-201ENST00000636055 55 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 AC018630.2-201ENST00000534866 2403 ntBASIC1.7□□□□□ -2.14
USP43Q70EL4 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 AL023284.1-201ENST00000403956 276 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 MIR1255A-201ENST00000408338 113 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.69□□□□□ -2.14
USP43Q70EL4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.69□□□□□ -2.14
USP43Q70EL4 AC108729.3-201ENST00000513484 108 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 RNU7-123P-201ENST00000515911 60 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 RNU2-35P-201ENST00000516446 142 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 SUMO2P16-201ENST00000519475 264 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 MIR4299-201ENST00000577899 72 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 SNRPGP19-201ENST00000603826 189 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.69□□□□□ -2.14
USP43Q70EL4 AL162726.3-218ENST00000636401 95 ntBASIC1.69□□□□□ -2.14
USP43Q70EL4 Y_RNA.213-201ENST00000364178 111 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 MIR522-201ENST00000385071 87 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 RNU11-5P-201ENST00000391216 129 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 FTH1P12-201ENST00000432137 551 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 AL353813.1-201ENST00000440700 253 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 ATP5J2P3-201ENST00000451550 258 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.68□□□□□ -2.14
USP43Q70EL4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 RNU6-521P-201ENST00000516663 105 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 HSPE1P19-201ENST00000603327 295 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 AC006441.5-201ENST00000612680 209 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 AC087741.2-201ENST00000619415 172 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.68□□□□□ -2.14
USP43Q70EL4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
USP43Q70EL4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 RNU6-690P-201ENST00000365242 106 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 SNORA2.2-201ENST00000365473 135 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 Y_RNA.410-201ENST00000383992 113 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 Y_RNA.440-201ENST00000384120 114 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 RNU6-160P-201ENST00000384591 107 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 MIR515-2-201ENST00000384883 83 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 MIR515-1-201ENST00000384884 83 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 HMGN2P39-201ENST00000398005 273 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 CST2P1-201ENST00000425770 87 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 SCARNA23-201ENST00000516060 130 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 RNU1-142P-201ENST00000516682 145 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 SNORD36C-201ENST00000516733 66 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 AC024995.1-201ENST00000523014 93 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 MIR3169-201ENST00000578032 83 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 MIR548Z-201ENST00000584743 97 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 AC021443.1-201ENST00000604478 211 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 AC022513.1-201ENST00000624512 117 ntBASIC1.67□□□□□ -2.14
USP43Q70EL4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.67□□□□□ -2.14
USP43Q70EL4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 Y_RNA.73-201ENST00000362910 113 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 RNY3P2-201ENST00000362918 102 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 RNA5SP493-201ENST00000364115 91 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 Y_RNA.221-201ENST00000364248 96 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 RNU6-1134P-201ENST00000365156 101 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 RNU6-675P-201ENST00000384236 104 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 AC096949.1-201ENST00000412047 152 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 AC099677.2-201ENST00000436385 175 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 RNU7-164P-201ENST00000459221 62 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 AC022137.1-201ENST00000483735 151 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 RNU7-25P-201ENST00000516544 62 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 MIR4419B-201ENST00000577260 68 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 AC026271.5-201ENST00000577873 130 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 MIR6845-201ENST00000613182 61 ntBASIC1.66□□□□□ -2.14
USP43Q70EL4 AC012531.4-201ENST00000616509 177 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms