Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.62□□□□□ -2.31
RPUSD3Q6P087 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.37-201ENST00000362606 108 ntBASIC0.61□□□□□ -2.31
RPUSD3Q6P087 RNY3P5-201ENST00000384127 102 ntBASIC0.61□□□□□ -2.31
RPUSD3Q6P087 MIR520F-201ENST00000384824 87 ntBASIC0.61□□□□□ -2.31
RPUSD3Q6P087 RPS29P24-201ENST00000486345 171 ntBASIC0.61□□□□□ -2.31
RPUSD3Q6P087 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
RPUSD3Q6P087 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
RPUSD3Q6P087 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
RPUSD3Q6P087 MIR215-201ENST00000384858 110 ntBASIC0.6□□□□□ -2.31
RPUSD3Q6P087 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.6□□□□□ -2.31
RPUSD3Q6P087 RPL21P38-201ENST00000418090 167 ntBASIC0.6□□□□□ -2.31
RPUSD3Q6P087 RNU6-1299P-201ENST00000516316 100 ntBASIC0.6□□□□□ -2.31
RPUSD3Q6P087 MIR4771-2-201ENST00000577758 74 ntBASIC0.6□□□□□ -2.31
RPUSD3Q6P087 MIR4771-1-201ENST00000582617 74 ntBASIC0.6□□□□□ -2.31
RPUSD3Q6P087 MIR3171-201ENST00000584270 74 ntBASIC0.6□□□□□ -2.31
RPUSD3Q6P087 AL008718.3-201ENST00000610217 321 ntBASIC0.6□□□□□ -2.31
RPUSD3Q6P087 AL589743.1-201ENST00000551932 2712 ntBASIC0.59□□□□□ -2.31
RPUSD3Q6P087 RNU6-888P-201ENST00000363010 101 ntBASIC0.59□□□□□ -2.31
RPUSD3Q6P087 SNORD45.3-201ENST00000363836 72 ntBASIC0.59□□□□□ -2.31
RPUSD3Q6P087 Y_RNA.410-201ENST00000383992 113 ntBASIC0.59□□□□□ -2.31
RPUSD3Q6P087 MIR573-201ENST00000384964 99 ntBASIC0.59□□□□□ -2.31
RPUSD3Q6P087 MIR18B-201ENST00000454574 71 ntBASIC0.59□□□□□ -2.31
RPUSD3Q6P087 RNU6-1338P-201ENST00000516328 91 ntBASIC0.59□□□□□ -2.31
RPUSD3Q6P087 SNORA18.4-201ENST00000516440 124 ntBASIC0.59□□□□□ -2.31
RPUSD3Q6P087 MIR4680-201ENST00000580906 66 ntBASIC0.59□□□□□ -2.31
RPUSD3Q6P087 AC010487.4-201ENST00000637027 61 ntBASIC0.59□□□□□ -2.31
RPUSD3Q6P087 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.84-201ENST00000363011 104 ntBASIC0.58□□□□□ -2.32
RPUSD3Q6P087 SNORA1.1-201ENST00000364671 133 ntBASIC0.58□□□□□ -2.32
RPUSD3Q6P087 RNU6-211P-201ENST00000384047 107 ntBASIC0.58□□□□□ -2.32
RPUSD3Q6P087 MIR520H-201ENST00000385126 88 ntBASIC0.58□□□□□ -2.32
RPUSD3Q6P087 RNU2-70P-201ENST00000410718 179 ntBASIC0.58□□□□□ -2.32
RPUSD3Q6P087 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
RPUSD3Q6P087 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.58□□□□□ -2.32
RPUSD3Q6P087 RNU7-96P-201ENST00000459535 64 ntBASIC0.58□□□□□ -2.32
RPUSD3Q6P087 MIR4711-201ENST00000578274 70 ntBASIC0.58□□□□□ -2.32
RPUSD3Q6P087 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.58□□□□□ -2.32
RPUSD3Q6P087 Z97988.1-201ENST00000637697 135 ntBASIC0.58□□□□□ -2.32
RPUSD3Q6P087 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.24-201ENST00000362508 103 ntBASIC0.57□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.64-201ENST00000362845 102 ntBASIC0.57□□□□□ -2.32
RPUSD3Q6P087 SNORD114-23-201ENST00000363536 72 ntBASIC0.57□□□□□ -2.32
RPUSD3Q6P087 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
RPUSD3Q6P087 MIR193B-201ENST00000384907 83 ntBASIC0.57□□□□□ -2.32
RPUSD3Q6P087 MIR518F-201ENST00000384973 87 ntBASIC0.57□□□□□ -2.32
RPUSD3Q6P087 RNU6-177P-201ENST00000411257 104 ntBASIC0.57□□□□□ -2.32
RPUSD3Q6P087 SNORD83.1-201ENST00000411362 77 ntBASIC0.57□□□□□ -2.32
RPUSD3Q6P087 AC007751.1-201ENST00000529260 376 ntBASIC0.57□□□□□ -2.32
RPUSD3Q6P087 U6.104-201ENST00000637979 90 ntBASIC0.57□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.138-201ENST00000363462 102 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.275-201ENST00000364726 110 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 RNU6-639P-201ENST00000384074 107 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 RNU6-1289P-201ENST00000384431 106 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 RNU6-1237P-201ENST00000384777 107 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 MIR626-201ENST00000385032 94 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 SNORD77.3-201ENST00000391113 65 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 RNA5SP261-201ENST00000410536 106 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 RN7SKP12-201ENST00000516275 143 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 RNA5SP153-201ENST00000516498 76 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.56□□□□□ -2.32
RPUSD3Q6P087 MIR8055-201ENST00000610739 97 ntBASIC0.56□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.44-201ENST00000362676 108 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 RNU6-797P-201ENST00000363101 109 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 RNA5SP325-201ENST00000363756 130 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.229-201ENST00000364347 113 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 SNORD61-201ENST00000384252 73 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.494-201ENST00000384432 111 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 RNU6-713P-201ENST00000384761 107 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 MIR140-201ENST00000385282 100 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 MIR938-201ENST00000401216 83 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 AC244023.1-201ENST00000426884 112 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 SCARNA24.2-201ENST00000516968 130 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 RNU6-1270P-201ENST00000517128 108 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 AC004817.2-201ENST00000561794 651 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 MIR1273G-201ENST00000577677 100 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 MIR4804-201ENST00000581683 73 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 AC242498.1-201ENST00000604134 111 ntBASIC0.55□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.16-201ENST00000362421 102 ntBASIC0.54□□□□□ -2.32
RPUSD3Q6P087 RNU6-806P-201ENST00000365147 105 ntBASIC0.54□□□□□ -2.32
RPUSD3Q6P087 RNU6-1189P-201ENST00000383958 107 ntBASIC0.54□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.432-201ENST00000384087 111 ntBASIC0.54□□□□□ -2.32
RPUSD3Q6P087 RNU6-985P-201ENST00000410182 104 ntBASIC0.54□□□□□ -2.32
RPUSD3Q6P087 RNU6-1203P-201ENST00000410703 110 ntBASIC0.54□□□□□ -2.32
RPUSD3Q6P087 AC020661.2-201ENST00000560114 134 ntBASIC0.54□□□□□ -2.32
RPUSD3Q6P087 MIR4676-201ENST00000583078 72 ntBASIC0.54□□□□□ -2.32
RPUSD3Q6P087 AC044792.1-201ENST00000593294 196 ntBASIC0.54□□□□□ -2.32
RPUSD3Q6P087 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
RPUSD3Q6P087 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
RPUSD3Q6P087 RNU6-369P-201ENST00000362515 102 ntBASIC0.53□□□□□ -2.32
RPUSD3Q6P087 Y_RNA.153-201ENST00000363615 91 ntBASIC0.53□□□□□ -2.32
RPUSD3Q6P087 RNU6-938P-201ENST00000411285 103 ntBASIC0.53□□□□□ -2.32
RPUSD3Q6P087 AL356055.1-201ENST00000602528 446 ntBASIC0.53□□□□□ -2.32
RPUSD3Q6P087 RNU4-10P-201ENST00000364383 140 ntBASIC0.52□□□□□ -2.33
RPUSD3Q6P087 RNU6-364P-201ENST00000384387 107 ntBASIC0.52□□□□□ -2.33
RPUSD3Q6P087 MIR548A2-201ENST00000384956 97 ntBASIC0.52□□□□□ -2.33
RPUSD3Q6P087 AC090844.1-201ENST00000422019 156 ntBASIC0.52□□□□□ -2.33
RPUSD3Q6P087 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 224.4 ms