Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNU6-153P-201ENST00000364422 104 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 RNU6-1056P-201ENST00000383996 107 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 MIR194-1-201ENST00000384892 85 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 MIR9-3-201ENST00000385084 90 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 MIR548O-201ENST00000408583 114 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 SNRPGP14-201ENST00000435400 219 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 JTBP1-201ENST00000441314 247 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 RNU7-12P-201ENST00000516030 62 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 RNU7-25P-201ENST00000516544 62 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 RNU6-919P-201ENST00000516731 104 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 RNU6-1149P-201ENST00000516810 97 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 SUMO2P16-201ENST00000519475 264 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 AC108081.1-201ENST00000604358 221 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 SNORD3E-202ENST00000627253 216 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 MIR3914-2-201ENST00000637339 95 ntBASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.9□□□□□ -2.11
SLC44A4Q53GD3 SNORD14E-201ENST00000364009 85 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 RNU6-1292P-201ENST00000383856 107 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 RNU6-442P-201ENST00000383968 104 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 MIR1267-201ENST00000408723 78 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 RNU6-1064P-201ENST00000410626 104 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 AL161935.2-201ENST00000414627 60 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 RNA5SP236-201ENST00000516169 116 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 IGKV1-22-201ENST00000524313 326 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 MTND5P34-201ENST00000568888 325 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 AL359821.1-201ENST00000605519 182 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 AC006441.5-201ENST00000612680 209 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 AL513423.1-201ENST00000621695 132 ntBASIC1.89□□□□□ -2.11
SLC44A4Q53GD3 MIR424-201ENST00000362227 98 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 RNU6-1298P-201ENST00000362456 101 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 SNORA63.4-201ENST00000362763 126 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 RNY1P10-201ENST00000363268 113 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 MIR660-201ENST00000385235 97 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 SNORA67.5-201ENST00000391036 107 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 Y_RNA.617-201ENST00000410920 90 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 CYCTP-201ENST00000504253 315 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 SCARNA15-202ENST00000516881 127 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 SNORA77B-201ENST00000578179 125 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 MIR8074-201ENST00000615081 81 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 AC106754.2-201ENST00000623006 233 ntBASIC1.88□□□□□ -2.11
SLC44A4Q53GD3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SLC44A4Q53GD3 SNORD58C-201ENST00000365223 64 ntBASIC1.87□□□□□ -2.11
SLC44A4Q53GD3 RNU6-1144P-201ENST00000384247 104 ntBASIC1.87□□□□□ -2.11
SLC44A4Q53GD3 RNU6-476P-201ENST00000384726 107 ntBASIC1.87□□□□□ -2.11
SLC44A4Q53GD3 MIR499A-201ENST00000384903 122 ntBASIC1.87□□□□□ -2.11
SLC44A4Q53GD3 AC004965.1-201ENST00000413033 213 ntBASIC1.87□□□□□ -2.11
SLC44A4Q53GD3 SNORD33.1-201ENST00000516213 88 ntBASIC1.87□□□□□ -2.11
SLC44A4Q53GD3 MIR8070-201ENST00000616510 88 ntBASIC1.87□□□□□ -2.11
SLC44A4Q53GD3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SLC44A4Q53GD3 RNU6-834P-201ENST00000362367 110 ntBASIC1.86□□□□□ -2.11
SLC44A4Q53GD3 RNU6-647P-201ENST00000364243 107 ntBASIC1.86□□□□□ -2.11
SLC44A4Q53GD3 Y_RNA.242-201ENST00000364473 110 ntBASIC1.86□□□□□ -2.11
SLC44A4Q53GD3 MTATP6P21-201ENST00000440681 189 ntBASIC1.86□□□□□ -2.11
SLC44A4Q53GD3 RPS29P11-201ENST00000496507 171 ntBASIC1.86□□□□□ -2.11
SLC44A4Q53GD3 RN7SKP19-201ENST00000516016 252 ntBASIC1.86□□□□□ -2.11
SLC44A4Q53GD3 SNORD36C-201ENST00000516733 66 ntBASIC1.86□□□□□ -2.11
SLC44A4Q53GD3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
SLC44A4Q53GD3 WWP1P1-201ENST00000466609 2769 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 SNORD115-28-201ENST00000363931 81 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 MIR1263-201ENST00000408324 86 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 RNU6-938P-201ENST00000411285 103 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 MIR4303-201ENST00000581299 66 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 MIR5197-201ENST00000583721 112 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 MIR502-201ENST00000606349 86 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 AC134878.1-201ENST00000619901 243 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 AC015726.2-201ENST00000620112 122 ntBASIC1.85□□□□□ -2.11
SLC44A4Q53GD3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 SNORA2.2-201ENST00000365473 135 ntBASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 RNA5SP259-201ENST00000365541 109 ntBASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 MIR513A1-201ENST00000385138 129 ntBASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 RNY4P18-201ENST00000391107 89 ntBASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 MIR8063-201ENST00000621930 81 ntBASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 AC027279.3-201ENST00000625055 122 ntBASIC1.84□□□□□ -2.11
SLC44A4Q53GD3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SLC44A4Q53GD3 RNU6-833P-201ENST00000363486 107 ntBASIC1.83□□□□□ -2.12
SLC44A4Q53GD3 SNORA25.9-201ENST00000365087 128 ntBASIC1.83□□□□□ -2.12
SLC44A4Q53GD3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.83□□□□□ -2.12
SLC44A4Q53GD3 MIR526A1-201ENST00000384897 85 ntBASIC1.83□□□□□ -2.12
SLC44A4Q53GD3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.83□□□□□ -2.12
SLC44A4Q53GD3 AC025166.1-201ENST00000612411 163 ntBASIC1.83□□□□□ -2.12
SLC44A4Q53GD3 U6.95-201ENST00000636931 70 ntBASIC1.83□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.366-201ENST00000365540 102 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 MIR548A1-201ENST00000385041 97 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 MIR30A-201ENST00000385092 71 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 MIR516B2-201ENST00000385190 85 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 MIRLET7F2-201ENST00000385277 83 ntBASIC1.82□□□□□ -2.12
SLC44A4Q53GD3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms