Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RNU6-111P-201ENST00000517179 105 ntBASIC1.24□□□□□ -2.21
CCDC38Q502W7 AP003484.1-201ENST00000530974 250 ntBASIC1.24□□□□□ -2.21
CCDC38Q502W7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC38Q502W7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC38Q502W7 Y_RNA.7-201ENST00000362352 102 ntBASIC1.23□□□□□ -2.21
CCDC38Q502W7 Y_RNA.121-201ENST00000363309 113 ntBASIC1.23□□□□□ -2.21
CCDC38Q502W7 RNY1-201ENST00000364228 113 ntBASIC1.23□□□□□ -2.21
CCDC38Q502W7 RNU6-561P-201ENST00000516222 102 ntBASIC1.23□□□□□ -2.21
CCDC38Q502W7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC38Q502W7 AP000942.4-201ENST00000604811 241 ntBASIC1.23□□□□□ -2.21
CCDC38Q502W7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
CCDC38Q502W7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.22□□□□□ -2.21
CCDC38Q502W7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 MIR200A-201ENST00000384875 90 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 MIR499A-201ENST00000384903 122 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 RNU6-493P-201ENST00000391321 108 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 AF228730.3-201ENST00000436691 102 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 RNU7-67P-201ENST00000459003 62 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 snoU13.16-201ENST00000459350 104 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 OR2A41P-201ENST00000473586 105 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 SNORA18.4-201ENST00000516440 124 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CCDC38Q502W7 MIR548AO-201ENST00000579992 96 ntBASIC1.22□□□□□ -2.21
CCDC38Q502W7 RNU6-396P-201ENST00000365369 105 ntBASIC1.21□□□□□ -2.22
CCDC38Q502W7 SNORA27-201ENST00000384323 126 ntBASIC1.21□□□□□ -2.22
CCDC38Q502W7 RNU6-578P-201ENST00000390980 103 ntBASIC1.21□□□□□ -2.22
CCDC38Q502W7 MIR2115-201ENST00000516657 100 ntBASIC1.21□□□□□ -2.22
CCDC38Q502W7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC38Q502W7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC38Q502W7 RNU6-392P-201ENST00000364926 101 ntBASIC1.2□□□□□ -2.22
CCDC38Q502W7 SNORD114-24-201ENST00000365029 72 ntBASIC1.2□□□□□ -2.22
CCDC38Q502W7 SNORA22-201ENST00000383907 134 ntBASIC1.2□□□□□ -2.22
CCDC38Q502W7 SNORA22C-201ENST00000384614 134 ntBASIC1.2□□□□□ -2.22
CCDC38Q502W7 AL121914.1-201ENST00000450188 156 ntBASIC1.2□□□□□ -2.22
CCDC38Q502W7 Y_RNA.797-201ENST00000515977 94 ntBASIC1.2□□□□□ -2.22
CCDC38Q502W7 SNORD36C-201ENST00000516733 66 ntBASIC1.2□□□□□ -2.22
CCDC38Q502W7 RNU2-4P-201ENST00000606190 192 ntBASIC1.2□□□□□ -2.22
CCDC38Q502W7 AC108706.1-201ENST00000611053 297 ntBASIC1.2□□□□□ -2.22
CCDC38Q502W7 MIR6516-201ENST00000630554 81 ntBASIC1.2□□□□□ -2.22
CCDC38Q502W7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC38Q502W7 Y_RNA.23-201ENST00000362496 106 ntBASIC1.19□□□□□ -2.22
CCDC38Q502W7 RNU6-923P-201ENST00000364753 107 ntBASIC1.19□□□□□ -2.22
CCDC38Q502W7 RNU6-1189P-201ENST00000383958 107 ntBASIC1.19□□□□□ -2.22
CCDC38Q502W7 Y_RNA.489-201ENST00000384410 101 ntBASIC1.19□□□□□ -2.22
CCDC38Q502W7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CCDC38Q502W7 RNU6-613P-201ENST00000410412 108 ntBASIC1.19□□□□□ -2.22
CCDC38Q502W7 Y_RNA.618-201ENST00000410949 107 ntBASIC1.19□□□□□ -2.22
CCDC38Q502W7 SNORD124-201ENST00000459577 104 ntBASIC1.19□□□□□ -2.22
CCDC38Q502W7 RPS29P24-201ENST00000486345 171 ntBASIC1.19□□□□□ -2.22
CCDC38Q502W7 MIR4308-201ENST00000580634 81 ntBASIC1.19□□□□□ -2.22
CCDC38Q502W7 AL391516.1-201ENST00000554380 2449 ntBASIC1.19□□□□□ -2.22
CCDC38Q502W7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.18□□□□□ -2.22
CCDC38Q502W7 Y_RNA.542-201ENST00000384641 111 ntBASIC1.18□□□□□ -2.22
CCDC38Q502W7 Y_RNA.571-201ENST00000384753 98 ntBASIC1.18□□□□□ -2.22
CCDC38Q502W7 snosnR66.1-201ENST00000391095 99 ntBASIC1.18□□□□□ -2.22
CCDC38Q502W7 RNU7-53P-201ENST00000516705 60 ntBASIC1.18□□□□□ -2.22
CCDC38Q502W7 RNU6-958P-201ENST00000516995 106 ntBASIC1.18□□□□□ -2.22
CCDC38Q502W7 AC131055.1-201ENST00000584626 316 ntBASIC1.18□□□□□ -2.22
CCDC38Q502W7 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
CCDC38Q502W7 AC012676.2-201ENST00000619258 186 ntBASIC1.18□□□□□ -2.22
CCDC38Q502W7 Y_RNA.200-201ENST00000364018 102 ntBASIC1.17□□□□□ -2.22
CCDC38Q502W7 Y_RNA.401-201ENST00000383965 117 ntBASIC1.17□□□□□ -2.22
CCDC38Q502W7 RNU4-70P-201ENST00000384579 139 ntBASIC1.17□□□□□ -2.22
CCDC38Q502W7 RNU7-73P-201ENST00000458743 63 ntBASIC1.17□□□□□ -2.22
CCDC38Q502W7 AC023827.1-201ENST00000569247 97 ntBASIC1.17□□□□□ -2.22
CCDC38Q502W7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC38Q502W7 AC103810.9-201ENST00000606688 112 ntBASIC1.17□□□□□ -2.22
CCDC38Q502W7 AC106800.4-201ENST00000614905 153 ntBASIC1.17□□□□□ -2.22
CCDC38Q502W7 RNU6-654P-201ENST00000364373 107 ntBASIC1.16□□□□□ -2.22
CCDC38Q502W7 SNORA1-201ENST00000384107 130 ntBASIC1.16□□□□□ -2.22
CCDC38Q502W7 SNORD77.3-201ENST00000391113 65 ntBASIC1.16□□□□□ -2.22
CCDC38Q502W7 SNORD111-201ENST00000408139 94 ntBASIC1.16□□□□□ -2.22
CCDC38Q502W7 RNU7-96P-201ENST00000459535 64 ntBASIC1.16□□□□□ -2.22
CCDC38Q502W7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.16□□□□□ -2.22
CCDC38Q502W7 AC036111.3-201ENST00000526389 112 ntBASIC1.16□□□□□ -2.22
CCDC38Q502W7 Y_RNA.182-201ENST00000363880 111 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 SNORD113.3-201ENST00000364630 78 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 Y_RNA.440-201ENST00000384120 114 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 MT-TN-201ENST00000387400 73 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 MIR942-201ENST00000401111 86 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC38Q502W7 AL035398.1-201ENST00000430869 322 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 FABP5P4-201ENST00000437203 171 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 SNORD116-25-201ENST00000516517 92 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 MIR378D2-201ENST00000580636 98 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 MIR4661-201ENST00000582720 75 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 Z83818.1-201ENST00000603584 150 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 AC009779.6-201ENST00000603972 165 ntBASIC1.15□□□□□ -2.23
CCDC38Q502W7 MIR411-201ENST00000362239 96 ntBASIC1.14□□□□□ -2.23
CCDC38Q502W7 Y_RNA.83-201ENST00000363005 113 ntBASIC1.14□□□□□ -2.23
CCDC38Q502W7 Y_RNA.188-201ENST00000363952 111 ntBASIC1.14□□□□□ -2.23
CCDC38Q502W7 RNU6-275P-201ENST00000364910 107 ntBASIC1.14□□□□□ -2.23
CCDC38Q502W7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.14□□□□□ -2.23
CCDC38Q502W7 UBL5P1-201ENST00000507979 193 ntBASIC1.14□□□□□ -2.23
CCDC38Q502W7 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
CCDC38Q502W7 AL365205.2-201ENST00000594586 68 ntBASIC1.14□□□□□ -2.23
CCDC38Q502W7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC38Q502W7 MIR377-201ENST00000362145 69 ntBASIC1.13□□□□□ -2.23
CCDC38Q502W7 RNU6-53P-201ENST00000365367 106 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 206.7 ms