Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 Y_RNA.651-201ENST00000459380 103 ntBASIC1.93□□□□□ -2.1
SF3B3Q15393 RN7SKP179-201ENST00000516126 217 ntBASIC1.93□□□□□ -2.1
SF3B3Q15393 RNA5SP481-201ENST00000516814 122 ntBASIC1.93□□□□□ -2.1
SF3B3Q15393 Y_RNA.712-201ENST00000517011 92 ntBASIC1.93□□□□□ -2.1
SF3B3Q15393 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.93□□□□□ -2.1
SF3B3Q15393 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.93□□□□□ -2.1
SF3B3Q15393 RNU6-235P-201ENST00000362644 107 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 Y_RNA.525-201ENST00000384570 113 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 SNORA67.6-201ENST00000391093 99 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 MIR1323-201ENST00000408090 73 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 RNU2-7P-201ENST00000410794 178 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 RNU6-938P-201ENST00000411285 103 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 MTATP6P21-201ENST00000440681 189 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 AC099513.1-201ENST00000490423 301 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 RNU6-1149P-201ENST00000516810 97 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 AC024614.2-201ENST00000577584 372 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 AL359881.1-201ENST00000602916 267 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 AL022345.2-201ENST00000606307 135 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 BX248123.2-201ENST00000606318 124 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 AC103810.8-201ENST00000607347 118 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 AC021506.2-201ENST00000612354 169 ntBASIC1.92□□□□□ -2.1
SF3B3Q15393 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.92□□□□□ -2.1
SF3B3Q15393 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
SF3B3Q15393 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SF3B3Q15393 Y_RNA.273-201ENST00000364703 102 ntBASIC1.91□□□□□ -2.1
SF3B3Q15393 RNU6-1189P-201ENST00000383958 107 ntBASIC1.91□□□□□ -2.1
SF3B3Q15393 snoU13.27-201ENST00000459278 104 ntBASIC1.91□□□□□ -2.1
SF3B3Q15393 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.91□□□□□ -2.1
SF3B3Q15393 AC008834.1-201ENST00000511612 175 ntBASIC1.91□□□□□ -2.1
SF3B3Q15393 RNU6-830P-201ENST00000516353 107 ntBASIC1.91□□□□□ -2.1
SF3B3Q15393 MIR8070-201ENST00000616510 88 ntBASIC1.91□□□□□ -2.1
SF3B3Q15393 AC015726.2-201ENST00000620112 122 ntBASIC1.91□□□□□ -2.1
SF3B3Q15393 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SF3B3Q15393 MIR337-201ENST00000362281 93 ntBASIC1.9□□□□□ -2.11
SF3B3Q15393 RNU6-647P-201ENST00000364243 107 ntBASIC1.9□□□□□ -2.11
SF3B3Q15393 SNORD38C-201ENST00000384381 69 ntBASIC1.9□□□□□ -2.11
SF3B3Q15393 Y_RNA.617-201ENST00000410920 90 ntBASIC1.9□□□□□ -2.11
SF3B3Q15393 SNORD36C-201ENST00000516733 66 ntBASIC1.9□□□□□ -2.11
SF3B3Q15393 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.9□□□□□ -2.11
SF3B3Q15393 MIR4709-201ENST00000577272 72 ntBASIC1.9□□□□□ -2.11
SF3B3Q15393 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.9□□□□□ -2.11
SF3B3Q15393 ICE2P2-201ENST00000483823 2787 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 AC004965.1-201ENST00000413033 213 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 AC015922.2-201ENST00000435593 184 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 AC087499.4-201ENST00000448505 178 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 RNU7-34P-201ENST00000459394 64 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 RNU7-12P-201ENST00000516030 62 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 RNU6-772P-201ENST00000516042 105 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 MIR4285-201ENST00000581001 85 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 AL513423.1-201ENST00000621695 132 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 MIR3914-2-201ENST00000637339 95 ntBASIC1.89□□□□□ -2.11
SF3B3Q15393 RNU6-834P-201ENST00000362367 110 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 Y_RNA.353-201ENST00000365440 108 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 Y_RNA.440-201ENST00000384120 114 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 MIR1287-201ENST00000408492 90 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 AC009474.2-201ENST00000451383 136 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 RNU5E-3P-201ENST00000515913 68 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 SNORA31.17-201ENST00000516953 127 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 SNORA31.24-201ENST00000517232 57 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 AP003484.1-201ENST00000530974 250 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 AC108081.1-201ENST00000604358 221 ntBASIC1.88□□□□□ -2.11
SF3B3Q15393 RNU6-392P-201ENST00000364926 101 ntBASIC1.87□□□□□ -2.11
SF3B3Q15393 SNORA2.2-201ENST00000365473 135 ntBASIC1.87□□□□□ -2.11
SF3B3Q15393 MIR934-201ENST00000401241 83 ntBASIC1.87□□□□□ -2.11
SF3B3Q15393 RNU6-113P-201ENST00000516653 101 ntBASIC1.87□□□□□ -2.11
SF3B3Q15393 MIR4421-201ENST00000578133 69 ntBASIC1.87□□□□□ -2.11
SF3B3Q15393 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.87□□□□□ -2.11
SF3B3Q15393 ZNF209P-201ENST00000593450 2304 ntBASIC1.87□□□□□ -2.11
SF3B3Q15393 SNORA7.1-201ENST00000363750 139 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 MIR660-201ENST00000385235 97 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 MIRLET7F2-201ENST00000385277 83 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 RNU6-360P-201ENST00000390944 104 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 SNORA40.5-201ENST00000391061 128 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 PGBD4P5-201ENST00000445958 426 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 AC093850.1-201ENST00000454121 251 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 RN7SKP19-201ENST00000516016 252 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 IGKV1-22-201ENST00000524313 326 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 AC133485.4-201ENST00000561835 220 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 AC138907.4-201ENST00000570107 226 ntBASIC1.86□□□□□ -2.11
SF3B3Q15393 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.86□□□□□ -2.11
SF3B3Q15393 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 RNU6-215P-201ENST00000365169 102 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 Y_RNA.327-201ENST00000365201 102 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 SNORD58C-201ENST00000365223 64 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 SNORD20-201ENST00000384550 80 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 MIR452-201ENST00000385020 85 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 Y_RNA.630-201ENST00000411370 108 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 RPS26P48-201ENST00000491713 339 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 RNU6-781P-201ENST00000516377 101 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 RNU6-1061P-201ENST00000516530 99 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 MIR3198-2-201ENST00000577868 80 ntBASIC1.85□□□□□ -2.11
SF3B3Q15393 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.84□□□□□ -2.11
SF3B3Q15393 SNORA44.1-201ENST00000517031 108 ntBASIC1.84□□□□□ -2.11
SF3B3Q15393 SNORD3E-202ENST00000627253 216 ntBASIC1.84□□□□□ -2.11
SF3B3Q15393 U6.95-201ENST00000636931 70 ntBASIC1.84□□□□□ -2.11
SF3B3Q15393 MIR516B2-201ENST00000385190 85 ntBASIC1.83□□□□□ -2.12
SF3B3Q15393 MTATP6P29-201ENST00000415057 132 ntBASIC1.83□□□□□ -2.12
SF3B3Q15393 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms