Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXC1Q12948 RNU6-23P-201ENST00000363283 107 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 RNU6-132P-201ENST00000383863 107 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 RNU6-1067P-201ENST00000384752 107 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 RNU6-1031P-201ENST00000384773 107 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 RNU6-220P-201ENST00000390919 107 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 RNU6-75P-201ENST00000515944 104 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 RN7SKP132-201ENST00000516001 208 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 RNU6-711P-201ENST00000517255 106 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 MIR4474-201ENST00000579189 78 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 MIR3064-201ENST00000581130 66 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 AC005786.1-201ENST00000588553 154 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 AC069114.2-201ENST00000604699 304 ntBASIC3.07□□□□□ -1.92
FOXC1Q12948 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
FOXC1Q12948 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXC1Q12948 RNU6-208P-201ENST00000362431 107 ntBASIC3.06□□□□□ -1.92
FOXC1Q12948 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXC1Q12948 WWP1P1-201ENST00000466609 2769 ntBASIC3.06□□□□□ -1.92
FOXC1Q12948 AC133485.1-201ENST00000567176 124 ntBASIC3.06□□□□□ -1.92
FOXC1Q12948 AC141846.1-201ENST00000568348 142 ntBASIC3.06□□□□□ -1.92
FOXC1Q12948 AC104996.3-201ENST00000590718 94 ntBASIC3.06□□□□□ -1.92
FOXC1Q12948 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
FOXC1Q12948 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXC1Q12948 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXC1Q12948 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
FOXC1Q12948 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
FOXC1Q12948 MIR423-201ENST00000362201 94 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 RNA5SP139-201ENST00000364340 117 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 RNU1-89P-201ENST00000384592 164 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 RNU6-950P-201ENST00000384651 107 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 MIR887-201ENST00000401258 79 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 AC105272.1-201ENST00000438604 198 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 AC093423.1-201ENST00000440817 142 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 HSPE1P24-201ENST00000450782 238 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 AC023790.1-201ENST00000482174 347 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 MIR4425-201ENST00000580572 84 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 MIR4536-1-201ENST00000583537 88 ntBASIC3.05□□□□□ -1.92
FOXC1Q12948 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXC1Q12948 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXC1Q12948 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
FOXC1Q12948 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
FOXC1Q12948 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.04□□□□□ -1.92
FOXC1Q12948 AC062016.1-201ENST00000355719 319 ntBASIC3.04□□□□□ -1.92
FOXC1Q12948 RNA5SP42-201ENST00000364278 115 ntBASIC3.04□□□□□ -1.92
FOXC1Q12948 RNU6-571P-201ENST00000384128 107 ntBASIC3.04□□□□□ -1.92
FOXC1Q12948 SNORA7.4-201ENST00000384249 137 ntBASIC3.04□□□□□ -1.92
FOXC1Q12948 AL139132.1-201ENST00000431587 344 ntBASIC3.04□□□□□ -1.92
FOXC1Q12948 AC108938.1-201ENST00000451204 136 ntBASIC3.04□□□□□ -1.92
FOXC1Q12948 SCARNA16.3-201ENST00000516595 184 ntBASIC3.04□□□□□ -1.92
FOXC1Q12948 AC026333.2-201ENST00000542164 106 ntBASIC3.04□□□□□ -1.92
FOXC1Q12948 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
FOXC1Q12948 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
FOXC1Q12948 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXC1Q12948 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.03□□□□□ -1.92
FOXC1Q12948 SNORD36A-201ENST00000362874 73 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 SNORA72.6-201ENST00000384520 129 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 RNU6-1237P-201ENST00000384777 107 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 MIR154-201ENST00000385243 84 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 Z98941.1-201ENST00000407764 100 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 SNORD59.2-201ENST00000516873 68 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 SNORA74.3-201ENST00000517108 154 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 AC104027.1-201ENST00000521887 300 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 YWHAEP2-201ENST00000580066 112 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 YWHAEP3-201ENST00000582767 121 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.03□□□□□ -1.92
FOXC1Q12948 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.03□□□□□ -1.92
FOXC1Q12948 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXC1Q12948 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.93
FOXC1Q12948 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXC1Q12948 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXC1Q12948 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
FOXC1Q12948 Y_RNA.36-201ENST00000362602 112 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 RNU1-70P-201ENST00000362618 164 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 SNORA70B-201ENST00000384210 135 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 Y_RNA.491-201ENST00000384417 107 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 MIR504-201ENST00000385065 83 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 RNU6-205P-201ENST00000390858 107 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 RHEBP3-201ENST00000411920 351 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 AC244636.1-201ENST00000421152 228 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 AC015818.7-201ENST00000428754 109 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 Y_RNA.676-201ENST00000516393 96 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 CYP3A52P-201ENST00000563326 91 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 AC138749.4-201ENST00000563970 127 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 MIR5047-201ENST00000579212 100 ntBASIC3.02□□□□□ -1.93
FOXC1Q12948 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXC1Q12948 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXC1Q12948 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXC1Q12948 Y_RNA.12-201ENST00000362393 112 ntBASIC3.01□□□□□ -1.93
FOXC1Q12948 SNORD90-201ENST00000391145 111 ntBASIC3.01□□□□□ -1.93
FOXC1Q12948 MIR942-201ENST00000401111 86 ntBASIC3.01□□□□□ -1.93
FOXC1Q12948 AC006989.1-201ENST00000427212 131 ntBASIC3.01□□□□□ -1.93
FOXC1Q12948 AC008413.1-201ENST00000511864 177 ntBASIC3.01□□□□□ -1.93
FOXC1Q12948 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.01□□□□□ -1.93
FOXC1Q12948 AL357312.1-201ENST00000603879 298 ntBASIC3.01□□□□□ -1.93
FOXC1Q12948 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXC1Q12948 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
FOXC1Q12948 RNU6-330P-201ENST00000363015 107 ntBASIC3□□□□□ -1.93
FOXC1Q12948 RNU6-283P-201ENST00000364788 107 ntBASIC3□□□□□ -1.93
FOXC1Q12948 Y_RNA.283-201ENST00000364798 112 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms