Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL442128.1-201ENST00000615151 90 ntBASIC2.51□□□□□ -2.01
PCDH1Q08174 MIR6717-201ENST00000622747 73 ntBASIC2.51□□□□□ -2.01
PCDH1Q08174 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.51□□□□□ -2.01
PCDH1Q08174 Y_RNA.10-201ENST00000362371 110 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 Y_RNA.360-201ENST00000365512 102 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 Y_RNA.430-201ENST00000384081 110 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 RNY1P7-201ENST00000384743 110 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 RNU6-913P-201ENST00000390913 95 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 SNORD77B-201ENST00000391112 67 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 Y_RNA.601-201ENST00000410500 113 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 RN7SL429P-201ENST00000479090 223 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 RN7SL489P-201ENST00000486185 223 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 RN7SL327P-201ENST00000488659 223 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 RNA5SP33-201ENST00000516687 98 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 RNU6-844P-201ENST00000517175 102 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 MIR548AE2-201ENST00000583456 67 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 AL020996.3-201ENST00000606617 222 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 RN7SL853P-201ENST00000617250 223 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 MALAT1.1-201ENST00000618249 95 ntBASIC2.5□□□□□ -2.01
PCDH1Q08174 AP000648.3-201ENST00000623539 4507 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PCDH1Q08174 RNA5SP126-201ENST00000365092 109 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 Y_RNA.466-201ENST00000384294 113 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 Y_RNA.537-201ENST00000384626 109 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 RNU6-1067P-201ENST00000384752 107 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 RNA5SP100-201ENST00000410903 110 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 RNA5SP59-201ENST00000410922 110 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 RNU6-762P-201ENST00000517107 102 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDH1Q08174 FAM106DP-201ENST00000586416 501 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.49□□□□□ -2.01
PCDH1Q08174 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.49□□□□□ -2.01
PCDH1Q08174 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDH1Q08174 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDH1Q08174 RNU6-859P-201ENST00000362728 107 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 RNU6-832P-201ENST00000363319 107 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 Y_RNA.342-201ENST00000365352 113 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 MIR605-201ENST00000385078 83 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 MIR577-201ENST00000385196 96 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 SNORA26.2-201ENST00000390922 122 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 RNY4P29-201ENST00000410801 97 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 RNA5SP450-201ENST00000411206 102 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 RPS12P2-201ENST00000439728 269 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 RPL23AP6-201ENST00000446637 472 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 SNORA74.3-201ENST00000517108 154 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 MIR4435-1-201ENST00000582552 80 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 MIR5194-201ENST00000582634 120 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 MIR4672-201ENST00000583126 81 ntBASIC2.48□□□□□ -2.01
PCDH1Q08174 RNU6-457P-201ENST00000363999 107 ntBASIC2.47□□□□□ -2.01
PCDH1Q08174 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
PCDH1Q08174 SNORD109B-201ENST00000458961 67 ntBASIC2.47□□□□□ -2.01
PCDH1Q08174 SNORD109A-201ENST00000459128 67 ntBASIC2.47□□□□□ -2.01
PCDH1Q08174 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDH1Q08174 SNORA31.25-201ENST00000517242 134 ntBASIC2.47□□□□□ -2.01
PCDH1Q08174 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.47□□□□□ -2.01
PCDH1Q08174 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDH1Q08174 SNORA3A-201ENST00000364113 130 ntBASIC2.46□□□□□ -2.02
PCDH1Q08174 RNU6-616P-201ENST00000384353 107 ntBASIC2.46□□□□□ -2.02
PCDH1Q08174 SNORA7.5-201ENST00000410672 110 ntBASIC2.46□□□□□ -2.02
PCDH1Q08174 MIR1270-201ENST00000459320 83 ntBASIC2.46□□□□□ -2.02
PCDH1Q08174 snoU13.16-201ENST00000459350 104 ntBASIC2.46□□□□□ -2.02
PCDH1Q08174 RNA5SP57-201ENST00000459463 123 ntBASIC2.46□□□□□ -2.02
PCDH1Q08174 AC024614.2-201ENST00000577584 372 ntBASIC2.46□□□□□ -2.02
PCDH1Q08174 MIR4529-201ENST00000578110 78 ntBASIC2.46□□□□□ -2.02
PCDH1Q08174 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.46□□□□□ -2.02
PCDH1Q08174 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDH1Q08174 AC016717.2-201ENST00000609089 5141 ntBASIC2.46□□□□□ -2.02
PCDH1Q08174 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
PCDH1Q08174 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.45□□□□□ -2.02
PCDH1Q08174 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PCDH1Q08174 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PCDH1Q08174 MIR196B-201ENST00000384852 84 ntBASIC2.45□□□□□ -2.02
PCDH1Q08174 MIR27B-201ENST00000385129 97 ntBASIC2.45□□□□□ -2.02
PCDH1Q08174 RNU6-360P-201ENST00000390944 104 ntBASIC2.45□□□□□ -2.02
PCDH1Q08174 RNU6-679P-201ENST00000391003 106 ntBASIC2.45□□□□□ -2.02
PCDH1Q08174 RNA5SP210-201ENST00000391034 120 ntBASIC2.45□□□□□ -2.02
PCDH1Q08174 AL353813.1-201ENST00000440700 253 ntBASIC2.45□□□□□ -2.02
PCDH1Q08174 SNORA31.17-201ENST00000516953 127 ntBASIC2.45□□□□□ -2.02
PCDH1Q08174 MIR4319-201ENST00000577285 85 ntBASIC2.45□□□□□ -2.02
PCDH1Q08174 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.45□□□□□ -2.02
PCDH1Q08174 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCDH1Q08174 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCDH1Q08174 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
PCDH1Q08174 Y_RNA.388-201ENST00000383919 113 ntBASIC2.44□□□□□ -2.02
PCDH1Q08174 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
PCDH1Q08174 HMGN1P33-201ENST00000432945 451 ntBASIC2.44□□□□□ -2.02
PCDH1Q08174 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.44□□□□□ -2.02
PCDH1Q08174 SNORA31.11-201ENST00000516528 139 ntBASIC2.44□□□□□ -2.02
PCDH1Q08174 MIR6715A-201ENST00000615929 79 ntBASIC2.44□□□□□ -2.02
PCDH1Q08174 AC062016.1-201ENST00000355719 319 ntBASIC2.43□□□□□ -2.02
PCDH1Q08174 RNU6-1123P-201ENST00000362347 106 ntBASIC2.43□□□□□ -2.02
PCDH1Q08174 SNORA32-201ENST00000384072 121 ntBASIC2.43□□□□□ -2.02
PCDH1Q08174 RNU7-43P-201ENST00000516554 64 ntBASIC2.43□□□□□ -2.02
PCDH1Q08174 RNA5SP82-201ENST00000516707 92 ntBASIC2.43□□□□□ -2.02
PCDH1Q08174 RNU7-193P-201ENST00000516723 65 ntBASIC2.43□□□□□ -2.02
PCDH1Q08174 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms