Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RNY1-201ENST00000364228 113 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 MIR520H-201ENST00000385126 88 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 MIR526A2-201ENST00000390198 65 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 MTCO2P12-201ENST00000427426 682 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 HMGN1P33-201ENST00000432945 451 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 RNU6-977P-201ENST00000516411 103 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 AC100767.1-201ENST00000528178 123 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 AC020661.2-201ENST00000560114 134 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 MIR4711-201ENST00000578274 70 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 AC006006.1-201ENST00000603082 144 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 AP000942.4-201ENST00000604811 241 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 MIR8055-201ENST00000610739 97 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 Y_RNA.802-201ENST00000614892 130 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 AC243829.3-201ENST00000622177 108 ntBASIC0.4□□□□□ -2.35
HMGCS1Q01581 Y_RNA.153-201ENST00000363615 91 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 Y_RNA.276-201ENST00000364732 109 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 RNU6-211P-201ENST00000384047 107 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 MIR573-201ENST00000384964 99 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 SNORA40.5-201ENST00000391061 128 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 RNA5SP193-201ENST00000410353 107 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 AC087499.4-201ENST00000448505 178 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 MTND4LP30-201ENST00000454092 297 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 RNU7-62P-201ENST00000458856 62 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 RNU6-1270P-201ENST00000517128 108 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 MIR4662B-201ENST00000579498 81 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 MIR4676-201ENST00000583078 72 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 MIR6740-201ENST00000618268 113 ntBASIC0.39□□□□□ -2.35
HMGCS1Q01581 UBE2WP1-201ENST00000362030 340 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 Y_RNA.117-201ENST00000363294 101 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 Y_RNA.229-201ENST00000364347 113 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 SNORA27-201ENST00000384323 126 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 RNU6-1289P-201ENST00000384431 106 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 RNU6-1237P-201ENST00000384777 107 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 MIR598-201ENST00000384868 97 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 RNU6-177P-201ENST00000411257 104 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 RNU7-73P-201ENST00000458743 63 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 SERF1AP1-201ENST00000514575 187 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 MIR4804-201ENST00000581683 73 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 Z83818.1-201ENST00000603584 150 ntBASIC0.38□□□□□ -2.35
HMGCS1Q01581 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
HMGCS1Q01581 SNORD24-201ENST00000383884 75 ntBASIC0.37□□□□□ -2.35
HMGCS1Q01581 SNORD38B-201ENST00000384690 67 ntBASIC0.37□□□□□ -2.35
HMGCS1Q01581 AF228730.3-201ENST00000436691 102 ntBASIC0.37□□□□□ -2.35
HMGCS1Q01581 AL731563.1-201ENST00000442202 214 ntBASIC0.37□□□□□ -2.35
HMGCS1Q01581 AL138752.1-201ENST00000452964 351 ntBASIC0.37□□□□□ -2.35
HMGCS1Q01581 RNU7-56P-201ENST00000458744 62 ntBASIC0.37□□□□□ -2.35
HMGCS1Q01581 RNU6-1338P-201ENST00000516328 91 ntBASIC0.37□□□□□ -2.35
HMGCS1Q01581 RNU6-365P-201ENST00000517113 106 ntBASIC0.37□□□□□ -2.35
HMGCS1Q01581 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.37□□□□□ -2.35
HMGCS1Q01581 SNORD38B-202ENST00000625943 69 ntBASIC0.37□□□□□ -2.35
HMGCS1Q01581 Z97988.1-201ENST00000637697 135 ntBASIC0.37□□□□□ -2.35
HMGCS1Q01581 AC010332.2-201ENST00000613083 1904 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.36□□□□□ -2.35
HMGCS1Q01581 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.36□□□□□ -2.35
HMGCS1Q01581 MIR18A-201ENST00000362310 71 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 Y_RNA.66-201ENST00000362862 102 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 RNU6-888P-201ENST00000363010 101 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 Y_RNA.91-201ENST00000363042 107 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 RNU6-1309P-201ENST00000363305 108 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 SNORA8.3-201ENST00000384679 139 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 MIR489-201ENST00000384923 84 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 MIR626-201ENST00000385032 94 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 MT-TT-201ENST00000387460 66 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 RNU6-1203P-201ENST00000410703 110 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 RNU6-1190P-201ENST00000410811 104 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 RNU6-651P-201ENST00000411040 105 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 RNU6-602P-201ENST00000411155 105 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 RPS29P24-201ENST00000486345 171 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 RNU6-1143P-201ENST00000516125 104 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 RNU6-570P-201ENST00000517051 105 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 MIR3612-201ENST00000579753 87 ntBASIC0.36□□□□□ -2.35
HMGCS1Q01581 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
HMGCS1Q01581 Y_RNA.152-201ENST00000363578 100 ntBASIC0.35□□□□□ -2.35
HMGCS1Q01581 Y_RNA.275-201ENST00000364726 110 ntBASIC0.35□□□□□ -2.35
HMGCS1Q01581 MIR588-201ENST00000384900 83 ntBASIC0.35□□□□□ -2.35
HMGCS1Q01581 MIR140-201ENST00000385282 100 ntBASIC0.35□□□□□ -2.35
HMGCS1Q01581 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.35□□□□□ -2.35
HMGCS1Q01581 RNU6-504P-201ENST00000516568 104 ntBASIC0.35□□□□□ -2.35
HMGCS1Q01581 MIR5688-201ENST00000580619 83 ntBASIC0.35□□□□□ -2.35
HMGCS1Q01581 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
HMGCS1Q01581 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.35□□□□□ -2.35
HMGCS1Q01581 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.34□□□□□ -2.36
HMGCS1Q01581 Y_RNA.7-201ENST00000362352 102 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 Y_RNA.634-201ENST00000364811 113 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
HMGCS1Q01581 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 SNORD12C-201ENST00000386307 89 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 RNU6-985P-201ENST00000410182 104 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 Y_RNA.622-201ENST00000411091 108 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.34□□□□□ -2.36
HMGCS1Q01581 SNRPGP8-201ENST00000454064 226 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 RNU2-11P-201ENST00000459191 187 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 RNU6-1299P-201ENST00000516316 100 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 RNU7-53P-201ENST00000516705 60 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 AC008608.1-201ENST00000603910 127 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 AL162730.1-201ENST00000605734 292 ntBASIC0.34□□□□□ -2.36
HMGCS1Q01581 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.33□□□□□ -2.36
HMGCS1Q01581 MIR342-201ENST00000362212 99 ntBASIC0.33□□□□□ -2.36
HMGCS1Q01581 Y_RNA.202-201ENST00000364083 110 ntBASIC0.33□□□□□ -2.36
HMGCS1Q01581 SNORA1.1-201ENST00000364671 133 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms