Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC011373.1-201ENST00000607270 237 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.05□□□□□ -2.58
H3F3AP84243 MIR1244-1-201ENST00000612829 85 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 MIR1244-3-201ENST00000635744 85 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 MIR1244-2-201ENST00000636449 85 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 MIR1244-4-202ENST00000636813 85 ntBASIC-1.05□□□□□ -2.58
H3F3AP84243 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.06□□□□□ -2.58
H3F3AP84243 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.06□□□□□ -2.58
H3F3AP84243 AC091951.2-201ENST00000500762 203 ntBASIC-1.06□□□□□ -2.58
H3F3AP84243 RNU6-998P-201ENST00000515894 101 ntBASIC-1.06□□□□□ -2.58
H3F3AP84243 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.06□□□□□ -2.58
H3F3AP84243 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.06□□□□□ -2.58
H3F3AP84243 AC073114.1-201ENST00000612027 490 ntBASIC-1.06□□□□□ -2.58
H3F3AP84243 MIR3662-201ENST00000637030 95 ntBASIC-1.06□□□□□ -2.58
H3F3AP84243 RNU6-653P-201ENST00000363074 106 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 RNA5SP368-201ENST00000364298 116 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
H3F3AP84243 RNU6-332P-201ENST00000391193 108 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 AC023449.1-201ENST00000454464 154 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 RNU6-956P-201ENST00000458868 103 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 RNU7-96P-201ENST00000459535 64 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 RNU7-149P-201ENST00000516739 59 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 AC022441.3-201ENST00000605737 136 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 RNU6-86P-201ENST00000606534 107 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 AL050303.3-201ENST00000613704 284 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 AC022140.2-201ENST00000623500 188 ntBASIC-1.07□□□□□ -2.58
H3F3AP84243 RNU6-509P-201ENST00000363519 107 ntBASIC-1.08□□□□□ -2.58
H3F3AP84243 SNORD114-15-201ENST00000364687 72 ntBASIC-1.08□□□□□ -2.58
H3F3AP84243 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.08□□□□□ -2.58
H3F3AP84243 MTND4P28-201ENST00000426217 387 ntBASIC-1.08□□□□□ -2.58
H3F3AP84243 SPINT5P-201ENST00000448174 155 ntBASIC-1.08□□□□□ -2.58
H3F3AP84243 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.08□□□□□ -2.58
H3F3AP84243 RNU6-693P-201ENST00000516134 107 ntBASIC-1.08□□□□□ -2.58
H3F3AP84243 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.08□□□□□ -2.58
H3F3AP84243 SNORD38.3-201ENST00000516599 73 ntBASIC-1.08□□□□□ -2.58
H3F3AP84243 AL162413.1-201ENST00000603198 110 ntBASIC-1.08□□□□□ -2.58
H3F3AP84243 AC005014.3-201ENST00000605985 190 ntBASIC-1.08□□□□□ -2.58
H3F3AP84243 RNU4-58P-201ENST00000363192 141 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 RNA5SP133-201ENST00000363368 119 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 SNORD114-25-201ENST00000363742 72 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 MIR9-2-201ENST00000384838 87 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 SNORD115-47-201ENST00000391226 86 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.09□□□□□ -2.58
H3F3AP84243 AC024067.1-201ENST00000426199 223 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 MIR2053-201ENST00000459295 91 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 AC021146.6-201ENST00000514659 117 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.09□□□□□ -2.58
H3F3AP84243 MTND3P12-201ENST00000559068 328 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 MIR3681-201ENST00000580089 72 ntBASIC-1.09□□□□□ -2.58
H3F3AP84243 MTND5P32-201ENST00000560711 1802 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 RNY1P13-201ENST00000365030 105 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 RNU6-901P-201ENST00000384593 106 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 SNORD56B-201ENST00000384713 71 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 MIR181B2-201ENST00000385004 89 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 SNORD83B-201ENST00000386745 93 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 RNU6-864P-201ENST00000516256 108 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 RNU6-881P-201ENST00000516813 102 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 RNU6-175P-201ENST00000516896 107 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 RNU2-31P-201ENST00000516954 155 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 DEFB117-201ENST00000602356 141 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 AC011476.5-201ENST00000615594 130 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 AC087588.2-201ENST00000617667 426 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 MIR6086-201ENST00000638065 55 ntBASIC-1.1□□□□□ -2.59
H3F3AP84243 MIR302B-201ENST00000362188 73 ntBASIC-1.11□□□□□ -2.59
H3F3AP84243 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.11□□□□□ -2.59
H3F3AP84243 MIR548A2-201ENST00000384956 97 ntBASIC-1.11□□□□□ -2.59
H3F3AP84243 RNU2-14P-201ENST00000411053 191 ntBASIC-1.11□□□□□ -2.59
H3F3AP84243 MTND2P9-201ENST00000422293 931 ntBASIC-1.11□□□□□ -2.59
H3F3AP84243 MTND1P2-201ENST00000430604 821 ntBASIC-1.11□□□□□ -2.59
H3F3AP84243 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.11□□□□□ -2.59
H3F3AP84243 AC005357.1-201ENST00000588399 301 ntBASIC-1.11□□□□□ -2.59
H3F3AP84243 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.11□□□□□ -2.59
H3F3AP84243 U6.109-201ENST00000636749 87 ntBASIC-1.11□□□□□ -2.59
H3F3AP84243 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.12□□□□□ -2.59
H3F3AP84243 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.12□□□□□ -2.59
H3F3AP84243 SNORA18-201ENST00000384416 132 ntBASIC-1.12□□□□□ -2.59
H3F3AP84243 RNU7-141P-201ENST00000459304 62 ntBASIC-1.12□□□□□ -2.59
H3F3AP84243 RNU6-566P-201ENST00000516790 107 ntBASIC-1.12□□□□□ -2.59
H3F3AP84243 RN7SKP295-201ENST00000517264 153 ntBASIC-1.12□□□□□ -2.59
H3F3AP84243 MIR4280-201ENST00000582178 76 ntBASIC-1.12□□□□□ -2.59
H3F3AP84243 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.12□□□□□ -2.59
H3F3AP84243 NBR2-204ENST00000587322 63 ntBASIC-1.12□□□□□ -2.59
H3F3AP84243 uc_338.10-201ENST00000621872 182 ntBASIC-1.12□□□□□ -2.59
H3F3AP84243 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 RNY1P7-201ENST00000384743 110 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 RNA5SP261-201ENST00000410536 106 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.13□□□□□ -2.59
H3F3AP84243 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
H3F3AP84243 AP000676.1-201ENST00000533307 52 ntBASIC-1.13□□□□□ -2.59
H3F3AP84243 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms