Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNU6-1189P-201ENST00000383958 107 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 MIR570-201ENST00000384917 97 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 AC006461.1-201ENST00000412637 326 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 MTND5P15-201ENST00000434246 349 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 RPS29P29-201ENST00000456396 171 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 RNU6-1053P-201ENST00000515930 101 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 RN7SKP179-201ENST00000516126 217 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 SNORA18.4-201ENST00000516440 124 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 SNORD36C-201ENST00000516733 66 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 AC004792.1-201ENST00000614523 137 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 AC243994.1-201ENST00000618627 109 ntBASIC1.16□□□□□ -2.22
CLDN20P56880 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.22
CLDN20P56880 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CLDN20P56880 RNA5SP327-201ENST00000362494 101 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 RNA5SP264-201ENST00000363115 107 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 Y_RNA.240-201ENST00000364469 95 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 SNORA24-201ENST00000384096 131 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 SNORA27-201ENST00000384323 126 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 SNORD77.3-201ENST00000391113 65 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 SNORA40.6-201ENST00000391153 128 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 AC005840.1-201ENST00000498412 377 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 AC107027.2-201ENST00000512197 115 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 RNU6-182P-201ENST00000516970 105 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 AP003716.2-201ENST00000528260 108 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 MIR3129-201ENST00000581095 76 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 MIR3660-201ENST00000584845 100 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 PRELID3BP2-201ENST00000605362 201 ntBASIC1.15□□□□□ -2.23
CLDN20P56880 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CLDN20P56880 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
CLDN20P56880 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.14□□□□□ -2.23
CLDN20P56880 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CLDN20P56880 Y_RNA.327-201ENST00000365201 102 ntBASIC1.14□□□□□ -2.23
CLDN20P56880 Y_RNA.494-201ENST00000384432 111 ntBASIC1.14□□□□□ -2.23
CLDN20P56880 RNU6-321P-201ENST00000410912 106 ntBASIC1.14□□□□□ -2.23
CLDN20P56880 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.14□□□□□ -2.23
CLDN20P56880 AC108059.2-201ENST00000434626 151 ntBASIC1.14□□□□□ -2.23
CLDN20P56880 SEPT7P4-201ENST00000437076 306 ntBASIC1.14□□□□□ -2.23
CLDN20P56880 RNU6-861P-201ENST00000516745 106 ntBASIC1.14□□□□□ -2.23
CLDN20P56880 MIR103A2-201ENST00000362154 78 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 RNU6-682P-201ENST00000363843 106 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 SNORA25.7-201ENST00000364375 127 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 Y_RNA.357-201ENST00000365487 109 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 Y_RNA.440-201ENST00000384120 114 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 RNU6-910P-201ENST00000390844 107 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 RPS29P24-201ENST00000486345 171 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 Y_RNA.662-201ENST00000516028 97 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 SNORA70.22-201ENST00000517160 124 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.13□□□□□ -2.23
CLDN20P56880 MIR5197-201ENST00000583721 112 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 AL022345.2-201ENST00000606307 135 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 MTND1P7-201ENST00000632801 297 ntBASIC1.13□□□□□ -2.23
CLDN20P56880 RNU6-597P-201ENST00000365620 102 ntBASIC1.12□□□□□ -2.23
CLDN20P56880 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
CLDN20P56880 SNORA80D-201ENST00000384488 135 ntBASIC1.12□□□□□ -2.23
CLDN20P56880 Y_RNA.521-201ENST00000384560 114 ntBASIC1.12□□□□□ -2.23
CLDN20P56880 RNU7-67P-201ENST00000459003 62 ntBASIC1.12□□□□□ -2.23
CLDN20P56880 snoU13.16-201ENST00000459350 104 ntBASIC1.12□□□□□ -2.23
CLDN20P56880 RNU7-96P-201ENST00000459535 64 ntBASIC1.12□□□□□ -2.23
CLDN20P56880 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
CLDN20P56880 RNU11-2P-201ENST00000516898 142 ntBASIC1.12□□□□□ -2.23
CLDN20P56880 SNORA25.3-201ENST00000363205 127 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 RNU4-84P-201ENST00000364200 139 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 Y_RNA.337-201ENST00000365312 102 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 Y_RNA.363-201ENST00000365529 113 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 Y_RNA.393-201ENST00000383936 102 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 MIR624-201ENST00000385217 97 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CLDN20P56880 SNORD12-201ENST00000391002 90 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 RNA5SP127-201ENST00000411051 133 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 RNU7-53P-201ENST00000516705 60 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 AC019288.1-201ENST00000557918 224 ntBASIC1.11□□□□□ -2.23
CLDN20P56880 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 MIR222-201ENST00000384992 110 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 RNU6-239P-201ENST00000390990 99 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 MIR1185-1-201ENST00000408598 86 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 AL591704.2-201ENST00000421658 181 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 AL035398.1-201ENST00000430869 322 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 AL392103.1-201ENST00000447000 198 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 RNU7-73P-201ENST00000458743 63 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 RNU6-998P-201ENST00000515894 101 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 SNORD79.1-201ENST00000516069 84 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 RNU6-958P-201ENST00000516995 106 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 MIR548AO-201ENST00000579992 96 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 AC027335.2-201ENST00000624030 375 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 MIR376A2-201ENST00000636782 80 ntBASIC1.1□□□□□ -2.23
CLDN20P56880 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.1□□□□□ -2.23
CLDN20P56880 SNORA25.8-201ENST00000364831 128 ntBASIC1.09□□□□□ -2.23
CLDN20P56880 RNU6-53P-201ENST00000365367 106 ntBASIC1.09□□□□□ -2.23
CLDN20P56880 Y_RNA.441-201ENST00000384123 112 ntBASIC1.09□□□□□ -2.23
CLDN20P56880 RNU6-768P-201ENST00000384683 107 ntBASIC1.09□□□□□ -2.23
CLDN20P56880 SNORA75.2-201ENST00000391138 150 ntBASIC1.09□□□□□ -2.23
CLDN20P56880 SNORA75.3-201ENST00000391231 150 ntBASIC1.09□□□□□ -2.23
CLDN20P56880 MIR1302-7-201ENST00000408841 72 ntBASIC1.09□□□□□ -2.23
CLDN20P56880 RNU5E-9P-201ENST00000411164 104 ntBASIC1.09□□□□□ -2.23
CLDN20P56880 RNU2-64P-201ENST00000411315 191 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms