Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 NBR2-204ENST00000587322 63 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 AC096720.1-201ENST00000604441 183 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 AC124312.5-201ENST00000604451 268 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 AC093424.1-201ENST00000604999 338 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 AC087588.2-201ENST00000617667 426 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 AC124864.2-201ENST00000624736 186 ntBASIC-0.64□□□□□ -2.51
FOXA3P55318 RNU6-451P-201ENST00000362921 107 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 RNU6-865P-201ENST00000364772 107 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 MIR548A2-201ENST00000384956 97 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 SNORD41.1-201ENST00000391000 69 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 AC024067.1-201ENST00000426199 223 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 AC244505.6-201ENST00000452829 130 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 RNA5SP484-201ENST00000458857 111 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 RNA5SP66-201ENST00000517178 101 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 AL359880.1-201ENST00000621879 266 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 MTND5P26-201ENST00000426018 1752 ntBASIC-0.65□□□□□ -2.51
FOXA3P55318 SNORD81.1-201ENST00000363064 77 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 RNY1P13-201ENST00000365030 105 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 SNORD61-201ENST00000384252 73 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 MIR7-2-201ENST00000384970 110 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 SNORD78.2-201ENST00000391076 69 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 SNORD75.1-201ENST00000408373 60 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 MIR1912-201ENST00000410389 80 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 RNU6-383P-201ENST00000410864 94 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 AL022718.1-201ENST00000412004 84 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 AF228730.3-201ENST00000436691 102 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 RNU7-169P-201ENST00000459456 61 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 RNU2-31P-201ENST00000516954 155 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 RNA5SP169-201ENST00000517268 117 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 MIR5589-201ENST00000579442 60 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 AC011373.1-201ENST00000607270 237 ntBASIC-0.66□□□□□ -2.52
FOXA3P55318 RNU4-58P-201ENST00000363192 141 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 RNA5SP133-201ENST00000363368 119 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 RNA5SP403-201ENST00000363598 108 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 RNY3P3-201ENST00000363816 102 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 RNU6-801P-201ENST00000364087 105 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 RNY3P11-201ENST00000364153 102 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 AC010655.3-201ENST00000478818 450 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 MTND5P5-201ENST00000503764 376 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 AC019235.1-201ENST00000503847 207 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 RNU7-188P-201ENST00000517063 64 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 AC100767.1-201ENST00000528178 123 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 AC006362.1-201ENST00000567392 174 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 AL360085.1-201ENST00000604713 532 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 AC024614.3-201ENST00000637860 256 ntBASIC-0.67□□□□□ -2.52
FOXA3P55318 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 SNORA72.4-201ENST00000384174 132 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 SNORA18-201ENST00000384416 132 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 RNY3P4-201ENST00000384428 101 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 RNU6-308P-201ENST00000390957 107 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 RNA5SP261-201ENST00000410536 106 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.68□□□□□ -2.52
FOXA3P55318 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 RNU6-120P-201ENST00000516077 103 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.68□□□□□ -2.52
FOXA3P55318 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.68□□□□□ -2.52
FOXA3P55318 SNORD114-14-201ENST00000362723 75 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 RNA5SP98-201ENST00000363158 137 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 RNU6-509P-201ENST00000363519 107 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 RNU6-47P-201ENST00000383866 107 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 RNU6-455P-201ENST00000384681 107 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 DEFB108C-201ENST00000400154 252 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 AL445193.1-201ENST00000441183 141 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 MTND3P10-201ENST00000450967 341 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 MIR4423-201ENST00000580922 80 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 MIR4473-201ENST00000583731 91 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 U6.109-201ENST00000636749 87 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 TPTEP1-208ENST00000636884 213 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 AC093726.3-201ENST00000637588 150 ntBASIC-0.69□□□□□ -2.52
FOXA3P55318 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.69□□□□□ -2.52
FOXA3P55318 RNU4-73P-201ENST00000363164 141 ntBASIC-0.7□□□□□ -2.52
FOXA3P55318 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.7□□□□□ -2.52
FOXA3P55318 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms