Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 Y_RNA.222-201ENST00000364264 102 ntBASIC0.03□□□□□ -2.4
CDH6P55285 MIR563-201ENST00000385080 79 ntBASIC0.03□□□□□ -2.4
CDH6P55285 MT-TF-201ENST00000387314 71 ntBASIC0.03□□□□□ -2.4
CDH6P55285 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
CDH6P55285 RNA5SP63-201ENST00000391225 112 ntBASIC0.03□□□□□ -2.4
CDH6P55285 RNA5SP496-201ENST00000391240 109 ntBASIC0.03□□□□□ -2.4
CDH6P55285 SNORD19B-201ENST00000459623 84 ntBASIC0.03□□□□□ -2.4
CDH6P55285 SNORD77.4-201ENST00000516158 81 ntBASIC0.03□□□□□ -2.4
CDH6P55285 RNU6-1270P-201ENST00000517128 108 ntBASIC0.03□□□□□ -2.4
CDH6P55285 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.03□□□□□ -2.4
CDH6P55285 MIR30D-201ENST00000362283 70 ntBASIC0.02□□□□□ -2.41
CDH6P55285 Y_RNA.7-201ENST00000362352 102 ntBASIC0.02□□□□□ -2.41
CDH6P55285 Y_RNA.85-201ENST00000363014 111 ntBASIC0.02□□□□□ -2.41
CDH6P55285 SNORA36.1-201ENST00000363424 132 ntBASIC0.02□□□□□ -2.41
CDH6P55285 SNORA42.1-201ENST00000363515 137 ntBASIC0.02□□□□□ -2.41
CDH6P55285 MIR548A2-201ENST00000384956 97 ntBASIC0.02□□□□□ -2.41
CDH6P55285 Y_RNA.587-201ENST00000391210 103 ntBASIC0.02□□□□□ -2.41
CDH6P55285 MIR548I3-201ENST00000408378 149 ntBASIC0.02□□□□□ -2.41
CDH6P55285 RNA5SP127-201ENST00000411051 133 ntBASIC0.02□□□□□ -2.41
CDH6P55285 AL358176.2-201ENST00000425769 204 ntBASIC0.02□□□□□ -2.41
CDH6P55285 AC112693.2-201ENST00000556538 232 ntBASIC0.02□□□□□ -2.41
CDH6P55285 MIR4724-201ENST00000579485 89 ntBASIC0.02□□□□□ -2.41
CDH6P55285 MIR4662B-201ENST00000579498 81 ntBASIC0.02□□□□□ -2.41
CDH6P55285 C8orf59P2-201ENST00000603441 271 ntBASIC0.02□□□□□ -2.41
CDH6P55285 AC006157.1-201ENST00000611750 366 ntBASIC0.02□□□□□ -2.41
CDH6P55285 MIR376A1-201ENST00000616574 68 ntBASIC0.02□□□□□ -2.41
CDH6P55285 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
CDH6P55285 Y_RNA.136-201ENST00000363444 102 ntBASIC0.01□□□□□ -2.41
CDH6P55285 Y_RNA.293-201ENST00000364908 93 ntBASIC0.01□□□□□ -2.41
CDH6P55285 MIR7-2-201ENST00000384970 110 ntBASIC0.01□□□□□ -2.41
CDH6P55285 HSPE1P25-201ENST00000455484 251 ntBASIC0.01□□□□□ -2.41
CDH6P55285 RNU2-11P-201ENST00000459191 187 ntBASIC0.01□□□□□ -2.41
CDH6P55285 Y_RNA.637-201ENST00000459424 114 ntBASIC0.01□□□□□ -2.41
CDH6P55285 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.01□□□□□ -2.41
CDH6P55285 RNU6-976P-201ENST00000516086 111 ntBASIC0.01□□□□□ -2.41
CDH6P55285 RNU6-397P-201ENST00000516226 104 ntBASIC0.01□□□□□ -2.41
CDH6P55285 RNU6-469P-201ENST00000516253 101 ntBASIC0.01□□□□□ -2.41
CDH6P55285 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.01□□□□□ -2.41
CDH6P55285 RNU6-1099P-201ENST00000363533 107 ntBASIC0□□□□□ -2.41
CDH6P55285 Y_RNA.390-201ENST00000383932 102 ntBASIC0□□□□□ -2.41
CDH6P55285 Y_RNA.424-201ENST00000384063 103 ntBASIC0□□□□□ -2.41
CDH6P55285 SNORD61-201ENST00000384252 73 ntBASIC0□□□□□ -2.41
CDH6P55285 Y_RNA.569-201ENST00000384749 103 ntBASIC0□□□□□ -2.41
CDH6P55285 MIR644A-201ENST00000385262 94 ntBASIC0□□□□□ -2.41
CDH6P55285 SNORD93-201ENST00000408813 74 ntBASIC0□□□□□ -2.41
CDH6P55285 Y_RNA.617-201ENST00000410920 90 ntBASIC0□□□□□ -2.41
CDH6P55285 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0□□□□□ -2.41
CDH6P55285 RNU2-31P-201ENST00000516954 155 ntBASIC0□□□□□ -2.41
CDH6P55285 AC100767.1-201ENST00000528178 123 ntBASIC0□□□□□ -2.41
CDH6P55285 UBE2V2P2-201ENST00000587677 504 ntBASIC0□□□□□ -2.41
CDH6P55285 MIR6779-201ENST00000617283 64 ntBASIC0□□□□□ -2.41
CDH6P55285 MIR342-201ENST00000362212 99 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 RNA5SP457-201ENST00000363657 124 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 SNORD24-201ENST00000383884 75 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 MIR1197-201ENST00000408818 88 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 RNU2-59P-201ENST00000410482 191 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 RNU4-83P-201ENST00000410863 133 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 SEPT7P4-201ENST00000437076 306 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 RPL39P25-201ENST00000449384 154 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 RNA5SP330-201ENST00000517096 96 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 MIR5692C2-201ENST00000577959 77 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 AC007485.1-201ENST00000616755 206 ntBASIC-0.01□□□□□ -2.41
CDH6P55285 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.01□□□□□ -2.41
CDH6P55285 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 RNU4-90P-201ENST00000362773 141 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 SNORD77.3-201ENST00000391113 65 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 AL512326.2-201ENST00000426359 151 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.02□□□□□ -2.41
CDH6P55285 RNU7-96P-201ENST00000459535 64 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 RNU6-998P-201ENST00000515894 101 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 RNU6-365P-201ENST00000517113 106 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.02□□□□□ -2.41
CDH6P55285 MIR8066-201ENST00000617280 78 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 AC112487.2-201ENST00000637950 304 ntBASIC-0.02□□□□□ -2.41
CDH6P55285 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.02□□□□□ -2.41
CDH6P55285 RNU6-740P-201ENST00000364734 105 ntBASIC-0.03□□□□□ -2.41
CDH6P55285 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.03□□□□□ -2.41
CDH6P55285 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.03□□□□□ -2.41
CDH6P55285 MTCO2P24-201ENST00000515611 426 ntBASIC-0.03□□□□□ -2.41
CDH6P55285 RNA5SP268-201ENST00000516828 124 ntBASIC-0.03□□□□□ -2.41
CDH6P55285 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 RNU6-888P-201ENST00000363010 101 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 RNA5SP214-201ENST00000363378 118 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 RNU4-10P-201ENST00000364383 140 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 PMCHL1-202ENST00000423102 261 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 AF228730.3-201ENST00000436691 102 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 RBMX2P4-201ENST00000441256 376 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 AC069271.1-201ENST00000445577 156 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 AC131281.1-201ENST00000522984 164 ntBASIC-0.04□□□□□ -2.42
CDH6P55285 AC104408.1-201ENST00000605241 170 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 337.3 ms