Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-126P-201ENST00000516685 103 ntBASIC1.04□□□□□ -2.24
PDX1P52945 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
PDX1P52945 AC108706.1-201ENST00000611053 297 ntBASIC1.04□□□□□ -2.24
PDX1P52945 MIR6515-201ENST00000619843 57 ntBASIC1.04□□□□□ -2.24
PDX1P52945 RNU6-103P-201ENST00000363686 107 ntBASIC1.03□□□□□ -2.24
PDX1P52945 Y_RNA.241-201ENST00000364470 117 ntBASIC1.03□□□□□ -2.24
PDX1P52945 SNORA25.8-201ENST00000364831 128 ntBASIC1.03□□□□□ -2.24
PDX1P52945 SNORA1.2-201ENST00000365189 134 ntBASIC1.03□□□□□ -2.24
PDX1P52945 AC063976.4-201ENST00000421971 163 ntBASIC1.03□□□□□ -2.24
PDX1P52945 AF228730.3-201ENST00000436691 102 ntBASIC1.03□□□□□ -2.24
PDX1P52945 RPS23P4-201ENST00000487908 423 ntBASIC1.03□□□□□ -2.24
PDX1P52945 SNORA18.4-201ENST00000516440 124 ntBASIC1.03□□□□□ -2.24
PDX1P52945 RNU6-113P-201ENST00000516653 101 ntBASIC1.03□□□□□ -2.24
PDX1P52945 MIR548AO-201ENST00000579992 96 ntBASIC1.03□□□□□ -2.24
PDX1P52945 MIR4744-201ENST00000581563 82 ntBASIC1.03□□□□□ -2.24
PDX1P52945 MTND1P7-201ENST00000632801 297 ntBASIC1.03□□□□□ -2.24
PDX1P52945 AC008163.1-202ENST00000636004 2889 ntBASIC1.02□□□□□ -2.25
PDX1P52945 MIR411-201ENST00000362239 96 ntBASIC1.02□□□□□ -2.25
PDX1P52945 Y_RNA.7-201ENST00000362352 102 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-34-201ENST00000362441 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-12-201ENST00000362583 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-29-201ENST00000362834 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-9-201ENST00000362912 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-21-201ENST00000362963 81 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-14-201ENST00000363090 81 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-13-201ENST00000363358 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-41-201ENST00000363608 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-11-201ENST00000363616 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-5-201ENST00000363633 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-39-201ENST00000363694 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-4-201ENST00000363810 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-16-201ENST00000363887 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-6-201ENST00000363942 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-42-201ENST00000364273 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-15-201ENST00000364809 81 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-1-201ENST00000364961 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-26-201ENST00000365067 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-10-201ENST00000365073 81 ntBASIC1.02□□□□□ -2.25
PDX1P52945 RNU6-728P-201ENST00000365375 104 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-43-201ENST00000365503 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-36-201ENST00000365629 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
PDX1P52945 SNORA1-201ENST00000384107 130 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORA80D-201ENST00000384488 135 ntBASIC1.02□□□□□ -2.25
PDX1P52945 Y_RNA.537-201ENST00000384626 109 ntBASIC1.02□□□□□ -2.25
PDX1P52945 Y_RNA.571-201ENST00000384753 98 ntBASIC1.02□□□□□ -2.25
PDX1P52945 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.02□□□□□ -2.25
PDX1P52945 AC002429.1-201ENST00000437672 148 ntBASIC1.02□□□□□ -2.25
PDX1P52945 AL392103.1-201ENST00000447000 198 ntBASIC1.02□□□□□ -2.25
PDX1P52945 RNU6-504P-201ENST00000516568 104 ntBASIC1.02□□□□□ -2.25
PDX1P52945 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.02□□□□□ -2.25
PDX1P52945 AP003484.1-201ENST00000530974 250 ntBASIC1.02□□□□□ -2.25
PDX1P52945 AC130289.1-201ENST00000577321 73 ntBASIC1.02□□□□□ -2.25
PDX1P52945 AC009779.6-201ENST00000603972 165 ntBASIC1.02□□□□□ -2.25
PDX1P52945 AP000942.4-201ENST00000604811 241 ntBASIC1.02□□□□□ -2.25
PDX1P52945 SNORD115-40-201ENST00000606510 82 ntBASIC1.02□□□□□ -2.25
PDX1P52945 AC243994.1-201ENST00000618627 109 ntBASIC1.02□□□□□ -2.25
PDX1P52945 MIR376A2-201ENST00000636782 80 ntBASIC1.02□□□□□ -2.25
PDX1P52945 Y_RNA.200-201ENST00000364018 102 ntBASIC1.01□□□□□ -2.25
PDX1P52945 RNU6-654P-201ENST00000364373 107 ntBASIC1.01□□□□□ -2.25
PDX1P52945 Y_RNA.274-201ENST00000364714 101 ntBASIC1.01□□□□□ -2.25
PDX1P52945 Y_RNA.330-201ENST00000365230 109 ntBASIC1.01□□□□□ -2.25
PDX1P52945 RNU6-47P-201ENST00000383866 107 ntBASIC1.01□□□□□ -2.25
PDX1P52945 SNORA24-201ENST00000384096 131 ntBASIC1.01□□□□□ -2.25
PDX1P52945 MIR618-201ENST00000385287 98 ntBASIC1.01□□□□□ -2.25
PDX1P52945 RNU6-578P-201ENST00000390980 103 ntBASIC1.01□□□□□ -2.25
PDX1P52945 SNORD12-201ENST00000391002 90 ntBASIC1.01□□□□□ -2.25
PDX1P52945 RNU6-918P-201ENST00000391219 106 ntBASIC1.01□□□□□ -2.25
PDX1P52945 SNORA26-201ENST00000391286 122 ntBASIC1.01□□□□□ -2.25
PDX1P52945 RNU4-43P-201ENST00000410628 137 ntBASIC1.01□□□□□ -2.25
PDX1P52945 RNU6-847P-201ENST00000411115 108 ntBASIC1.01□□□□□ -2.25
PDX1P52945 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
PDX1P52945 RNU6-1271P-201ENST00000517049 105 ntBASIC1.01□□□□□ -2.25
PDX1P52945 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
PDX1P52945 Y_RNA.182-201ENST00000363880 111 ntBASIC1□□□□□ -2.25
PDX1P52945 Y_RNA.188-201ENST00000363952 111 ntBASIC1□□□□□ -2.25
PDX1P52945 Y_RNA.412-201ENST00000384001 104 ntBASIC1□□□□□ -2.25
PDX1P52945 Y_RNA.489-201ENST00000384410 101 ntBASIC1□□□□□ -2.25
PDX1P52945 MIR19B1-201ENST00000384829 87 ntBASIC1□□□□□ -2.25
PDX1P52945 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1□□□□□ -2.25
PDX1P52945 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1□□□□□ -2.25
PDX1P52945 AC087499.4-201ENST00000448505 178 ntBASIC1□□□□□ -2.25
PDX1P52945 AL121914.1-201ENST00000450188 156 ntBASIC1□□□□□ -2.25
PDX1P52945 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
PDX1P52945 SEPT14P17-201ENST00000617978 177 ntBASIC1□□□□□ -2.25
PDX1P52945 AC078938.1-201ENST00000620993 318 ntBASIC1□□□□□ -2.25
PDX1P52945 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
PDX1P52945 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
PDX1P52945 Y_RNA.83-201ENST00000363005 113 ntBASIC0.99□□□□□ -2.25
PDX1P52945 Y_RNA.121-201ENST00000363309 113 ntBASIC0.99□□□□□ -2.25
PDX1P52945 RNU6-379P-201ENST00000363813 104 ntBASIC0.99□□□□□ -2.25
PDX1P52945 Y_RNA.401-201ENST00000383965 117 ntBASIC0.99□□□□□ -2.25
PDX1P52945 MIR613-201ENST00000385248 95 ntBASIC0.99□□□□□ -2.25
PDX1P52945 RNA5SP95-201ENST00000410319 137 ntBASIC0.99□□□□□ -2.25
PDX1P52945 Y_RNA.618-201ENST00000410949 107 ntBASIC0.99□□□□□ -2.25
PDX1P52945 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
PDX1P52945 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.99□□□□□ -2.25
PDX1P52945 Y_RNA.797-201ENST00000515977 94 ntBASIC0.99□□□□□ -2.25
PDX1P52945 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.99□□□□□ -2.25
PDX1P52945 AC023827.1-201ENST00000569247 97 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms