Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC008133.2-201ENST00000624540 351 ntBASIC1.26□□□□□ -2.21
CLCNKAP51800 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CLCNKAP51800 SNORA1.2-201ENST00000365189 134 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 Y_RNA.441-201ENST00000384123 112 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 Y_RNA.542-201ENST00000384641 111 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 MT-TR-201ENST00000387439 65 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 AC087499.4-201ENST00000448505 178 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 RPL39P39-201ENST00000455840 151 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 RPS26P48-201ENST00000491713 339 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 SNORA18.4-201ENST00000516440 124 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 AL365205.2-201ENST00000594586 68 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 AC104465.1-201ENST00000611365 139 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CLCNKAP51800 MIR8065-201ENST00000620577 100 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.25□□□□□ -2.21
CLCNKAP51800 MIR3658-201ENST00000636291 56 ntBASIC1.25□□□□□ -2.21
CLCNKAP51800 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.24□□□□□ -2.21
CLCNKAP51800 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLCNKAP51800 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-34-201ENST00000362441 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-12-201ENST00000362583 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-29-201ENST00000362834 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-9-201ENST00000362912 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-21-201ENST00000362963 81 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-14-201ENST00000363090 81 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-13-201ENST00000363358 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-41-201ENST00000363608 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-11-201ENST00000363616 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-5-201ENST00000363633 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-39-201ENST00000363694 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-4-201ENST00000363810 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-16-201ENST00000363887 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-6-201ENST00000363942 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-42-201ENST00000364273 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-15-201ENST00000364809 81 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-1-201ENST00000364961 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-26-201ENST00000365067 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-10-201ENST00000365073 81 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-43-201ENST00000365503 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-36-201ENST00000365629 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 Y_RNA.393-201ENST00000383936 102 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 RNU6-1189P-201ENST00000383958 107 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 RNU6-239P-201ENST00000390990 99 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.24□□□□□ -2.21
CLCNKAP51800 SNORD115-40-201ENST00000606510 82 ntBASIC1.24□□□□□ -2.21
CLCNKAP51800 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CLCNKAP51800 SNORA25.3-201ENST00000363205 127 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 Y_RNA.272-201ENST00000364696 102 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 Y_RNA.337-201ENST00000365312 102 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 Y_RNA.410-201ENST00000383992 113 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 SNORA51.10-201ENST00000384418 136 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 RNU6-1135P-201ENST00000411083 103 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 RPS29P29-201ENST00000456396 171 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 AC048334.1-201ENST00000477975 159 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.23□□□□□ -2.21
CLCNKAP51800 RNU2-13P-201ENST00000515909 113 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 AC068338.1-201ENST00000565567 176 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 MIR4791-201ENST00000607666 84 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
CLCNKAP51800 MIR4251-201ENST00000635819 61 ntBASIC1.23□□□□□ -2.21
CLCNKAP51800 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.22□□□□□ -2.21
CLCNKAP51800 MIR337-201ENST00000362281 93 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 Y_RNA.4-201ENST00000362333 112 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 SNORA25.7-201ENST00000364375 127 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 RNU6-1082P-201ENST00000364574 107 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 RNU6-597P-201ENST00000365620 102 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 Y_RNA.440-201ENST00000384120 114 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 SNORA70.7-201ENST00000384159 133 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 RNU6-804P-201ENST00000384286 107 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 SNORA27-201ENST00000384323 126 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 Y_RNA.555-201ENST00000384673 110 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 SNORA40.5-201ENST00000391061 128 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.22□□□□□ -2.21
CLCNKAP51800 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 MIR5197-201ENST00000583721 112 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 AC243994.1-201ENST00000618627 109 ntBASIC1.22□□□□□ -2.21
CLCNKAP51800 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
CLCNKAP51800 RNU6-1130P-201ENST00000365434 107 ntBASIC1.21□□□□□ -2.22
CLCNKAP51800 RNU6-1292P-201ENST00000383856 107 ntBASIC1.21□□□□□ -2.22
CLCNKAP51800 Y_RNA.537-201ENST00000384626 109 ntBASIC1.21□□□□□ -2.22
CLCNKAP51800 RNA5SP127-201ENST00000411051 133 ntBASIC1.21□□□□□ -2.22
CLCNKAP51800 AC107297.1-201ENST00000459991 176 ntBASIC1.21□□□□□ -2.22
CLCNKAP51800 RNU7-121P-201ENST00000516604 62 ntBASIC1.21□□□□□ -2.22
CLCNKAP51800 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.21□□□□□ -2.22
CLCNKAP51800 MIR6078-201ENST00000611069 100 ntBASIC1.21□□□□□ -2.22
CLCNKAP51800 MTND1P7-201ENST00000632801 297 ntBASIC1.21□□□□□ -2.22
CLCNKAP51800 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.21□□□□□ -2.22
CLCNKAP51800 MIR342-201ENST00000362212 99 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 Y_RNA.8-201ENST00000362353 102 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 RNA5SP48-201ENST00000363969 126 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 RNU6-818P-201ENST00000364837 108 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 SNORD116-18-201ENST00000383961 92 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 MIR624-201ENST00000385217 97 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 AC245047.7-201ENST00000440265 293 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 RNU7-67P-201ENST00000459003 62 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 RPS29P24-201ENST00000486345 171 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 RNU6-958P-201ENST00000516995 106 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 MIR4781-201ENST00000585250 76 ntBASIC1.2□□□□□ -2.22
CLCNKAP51800 RNY1P11-201ENST00000363759 113 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms