Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
LIG4P49917 SNORD45.3-201ENST00000363836 72 ntBASIC0.79□□□□□ -2.28
LIG4P49917 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
LIG4P49917 Y_RNA.590-201ENST00000410140 107 ntBASIC0.79□□□□□ -2.28
LIG4P49917 AC090844.1-201ENST00000422019 156 ntBASIC0.79□□□□□ -2.28
LIG4P49917 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.79□□□□□ -2.28
LIG4P49917 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.79□□□□□ -2.28
LIG4P49917 RNU6-1299P-201ENST00000516316 100 ntBASIC0.79□□□□□ -2.28
LIG4P49917 MIR151B-201ENST00000584249 96 ntBASIC0.79□□□□□ -2.28
LIG4P49917 AC104465.1-201ENST00000611365 139 ntBASIC0.79□□□□□ -2.28
LIG4P49917 MIR1-1-201ENST00000362147 71 ntBASIC0.78□□□□□ -2.28
LIG4P49917 Y_RNA.118-201ENST00000363300 101 ntBASIC0.78□□□□□ -2.28
LIG4P49917 SNORA63-201ENST00000363450 132 ntBASIC0.78□□□□□ -2.28
LIG4P49917 RNU6-580P-201ENST00000365159 107 ntBASIC0.78□□□□□ -2.28
LIG4P49917 SNORA27-201ENST00000384323 126 ntBASIC0.78□□□□□ -2.28
LIG4P49917 Y_RNA.574-201ENST00000384766 95 ntBASIC0.78□□□□□ -2.28
LIG4P49917 MT-TT-201ENST00000387460 66 ntBASIC0.78□□□□□ -2.28
LIG4P49917 SNORA26-201ENST00000391286 122 ntBASIC0.78□□□□□ -2.28
LIG4P49917 RNU2-70P-201ENST00000410718 179 ntBASIC0.78□□□□□ -2.28
LIG4P49917 RNU2-55P-201ENST00000411146 174 ntBASIC0.78□□□□□ -2.28
LIG4P49917 RPS26P5-201ENST00000418544 335 ntBASIC0.78□□□□□ -2.28
LIG4P49917 Y_RNA.679-201ENST00000516416 91 ntBASIC0.78□□□□□ -2.28
LIG4P49917 SNORD36C-201ENST00000516733 66 ntBASIC0.78□□□□□ -2.28
LIG4P49917 MIR4264-201ENST00000583520 66 ntBASIC0.78□□□□□ -2.28
LIG4P49917 Y_RNA.66-201ENST00000362862 102 ntBASIC0.77□□□□□ -2.29
LIG4P49917 Y_RNA.91-201ENST00000363042 107 ntBASIC0.77□□□□□ -2.29
LIG4P49917 snoU2_19.4-201ENST00000364329 80 ntBASIC0.77□□□□□ -2.29
LIG4P49917 RNU6-484P-201ENST00000384016 107 ntBASIC0.77□□□□□ -2.29
LIG4P49917 RNY3P5-201ENST00000384127 102 ntBASIC0.77□□□□□ -2.29
LIG4P49917 MIR606-201ENST00000384851 96 ntBASIC0.77□□□□□ -2.29
LIG4P49917 MIR548F4-201ENST00000408515 105 ntBASIC0.77□□□□□ -2.29
LIG4P49917 Y_RNA.622-201ENST00000411091 108 ntBASIC0.77□□□□□ -2.29
LIG4P49917 RNU7-73P-201ENST00000458743 63 ntBASIC0.77□□□□□ -2.29
LIG4P49917 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
LIG4P49917 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.77□□□□□ -2.29
LIG4P49917 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.76□□□□□ -2.29
LIG4P49917 Y_RNA.634-201ENST00000364811 113 ntBASIC0.76□□□□□ -2.29
LIG4P49917 Y_RNA.432-201ENST00000384087 111 ntBASIC0.76□□□□□ -2.29
LIG4P49917 Y_RNA.508-201ENST00000384502 114 ntBASIC0.76□□□□□ -2.29
LIG4P49917 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
LIG4P49917 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
LIG4P49917 RNU6-913P-201ENST00000390913 95 ntBASIC0.76□□□□□ -2.29
LIG4P49917 snoU13.21-201ENST00000459368 105 ntBASIC0.76□□□□□ -2.29
LIG4P49917 snoU13.18-201ENST00000459483 104 ntBASIC0.76□□□□□ -2.29
LIG4P49917 RPS29P24-201ENST00000486345 171 ntBASIC0.76□□□□□ -2.29
LIG4P49917 RNU7-53P-201ENST00000516705 60 ntBASIC0.76□□□□□ -2.29
LIG4P49917 RNU6-453P-201ENST00000516819 85 ntBASIC0.76□□□□□ -2.29
LIG4P49917 AL442663.2-201ENST00000554385 511 ntBASIC0.76□□□□□ -2.29
LIG4P49917 AC133485.1-201ENST00000567176 124 ntBASIC0.76□□□□□ -2.29
LIG4P49917 AC138907.6-201ENST00000568401 126 ntBASIC0.76□□□□□ -2.29
LIG4P49917 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.76□□□□□ -2.29
LIG4P49917 MIR4282-201ENST00000583613 67 ntBASIC0.76□□□□□ -2.29
LIG4P49917 Y_RNA.812-201ENST00000610788 101 ntBASIC0.76□□□□□ -2.29
LIG4P49917 Y_RNA.784-201ENST00000613803 101 ntBASIC0.76□□□□□ -2.29
LIG4P49917 Y_RNA.787-201ENST00000616522 101 ntBASIC0.76□□□□□ -2.29
LIG4P49917 Y_RNA.780-201ENST00000617336 101 ntBASIC0.76□□□□□ -2.29
LIG4P49917 Y_RNA.801-201ENST00000619005 101 ntBASIC0.76□□□□□ -2.29
LIG4P49917 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
LIG4P49917 SNORA63C-201ENST00000364578 129 ntBASIC0.75□□□□□ -2.29
LIG4P49917 Y_RNA.304-201ENST00000365011 112 ntBASIC0.75□□□□□ -2.29
LIG4P49917 RNU6-472P-201ENST00000384299 107 ntBASIC0.75□□□□□ -2.29
LIG4P49917 Y_RNA.518-201ENST00000384552 113 ntBASIC0.75□□□□□ -2.29
LIG4P49917 MIR616-201ENST00000385293 97 ntBASIC0.75□□□□□ -2.29
LIG4P49917 SNORD105-201ENST00000386910 85 ntBASIC0.75□□□□□ -2.29
LIG4P49917 AL606845.1-201ENST00000404881 255 ntBASIC0.75□□□□□ -2.29
LIG4P49917 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
LIG4P49917 AC244023.1-201ENST00000426884 112 ntBASIC0.75□□□□□ -2.29
LIG4P49917 AF228730.3-201ENST00000436691 102 ntBASIC0.75□□□□□ -2.29
LIG4P49917 SNRPGP8-201ENST00000454064 226 ntBASIC0.75□□□□□ -2.29
LIG4P49917 RNA5SP153-201ENST00000516498 76 ntBASIC0.75□□□□□ -2.29
LIG4P49917 AC242498.1-201ENST00000604134 111 ntBASIC0.75□□□□□ -2.29
LIG4P49917 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
LIG4P49917 AL365265.1-201ENST00000621045 234 ntBASIC0.75□□□□□ -2.29
LIG4P49917 Y_RNA.145-201ENST00000363527 102 ntBASIC0.74□□□□□ -2.29
LIG4P49917 Y_RNA.176-201ENST00000363815 109 ntBASIC0.74□□□□□ -2.29
LIG4P49917 RNU6-110P-201ENST00000384508 104 ntBASIC0.74□□□□□ -2.29
LIG4P49917 AC008737.2-201ENST00000599446 118 ntBASIC0.74□□□□□ -2.29
LIG4P49917 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
LIG4P49917 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LIG4P49917 Y_RNA.199-201ENST00000364014 102 ntBASIC0.73□□□□□ -2.29
LIG4P49917 RNU6-934P-201ENST00000365154 107 ntBASIC0.73□□□□□ -2.29
LIG4P49917 Y_RNA.355-201ENST00000365462 98 ntBASIC0.73□□□□□ -2.29
LIG4P49917 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LIG4P49917 RNU6-1228P-201ENST00000391014 107 ntBASIC0.73□□□□□ -2.29
LIG4P49917 SNORD83.1-201ENST00000411362 77 ntBASIC0.73□□□□□ -2.29
LIG4P49917 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
LIG4P49917 MTND5P15-201ENST00000434246 349 ntBASIC0.73□□□□□ -2.29
LIG4P49917 RNU7-62P-201ENST00000458856 62 ntBASIC0.73□□□□□ -2.29
LIG4P49917 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
LIG4P49917 MIR8055-201ENST00000610739 97 ntBASIC0.73□□□□□ -2.29
LIG4P49917 Z97988.1-201ENST00000637697 135 ntBASIC0.73□□□□□ -2.29
LIG4P49917 RNU6-369P-201ENST00000362515 102 ntBASIC0.72□□□□□ -2.29
LIG4P49917 RNU6-694P-201ENST00000364071 147 ntBASIC0.72□□□□□ -2.29
LIG4P49917 Y_RNA.396-201ENST00000383949 103 ntBASIC0.72□□□□□ -2.29
LIG4P49917 Y_RNA.410-201ENST00000383992 113 ntBASIC0.72□□□□□ -2.29
LIG4P49917 SNORD38B-201ENST00000384690 67 ntBASIC0.72□□□□□ -2.29
LIG4P49917 RNU1-119P-201ENST00000391122 165 ntBASIC0.72□□□□□ -2.29
LIG4P49917 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.72□□□□□ -2.29
LIG4P49917 AC244098.3-201ENST00000424803 96 ntBASIC0.72□□□□□ -2.29
LIG4P49917 HMGN1P33-201ENST00000432945 451 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 235.6 ms