Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 AC015688.6-201ENST00000577737 104 ntBASIC1.45□□□□□ -2.18
RFX2P48378 MIR548AI-201ENST00000579940 88 ntBASIC1.45□□□□□ -2.18
RFX2P48378 HSPE1P19-201ENST00000603327 295 ntBASIC1.45□□□□□ -2.18
RFX2P48378 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.45□□□□□ -2.18
RFX2P48378 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.45□□□□□ -2.18
RFX2P48378 AL590808.1-201ENST00000618696 141 ntBASIC1.45□□□□□ -2.18
RFX2P48378 AC092881.1-201ENST00000638218 2733 ntBASIC1.44□□□□□ -2.18
RFX2P48378 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.44□□□□□ -2.18
RFX2P48378 RNU4-16P-201ENST00000364737 141 ntBASIC1.44□□□□□ -2.18
RFX2P48378 MIR653-201ENST00000385279 96 ntBASIC1.44□□□□□ -2.18
RFX2P48378 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
RFX2P48378 RNU7-67P-201ENST00000459003 62 ntBASIC1.44□□□□□ -2.18
RFX2P48378 RNU2-11P-201ENST00000459191 187 ntBASIC1.44□□□□□ -2.18
RFX2P48378 RNU6-998P-201ENST00000515894 101 ntBASIC1.44□□□□□ -2.18
RFX2P48378 RNU6-772P-201ENST00000516042 105 ntBASIC1.44□□□□□ -2.18
RFX2P48378 RNU6-781P-201ENST00000516377 101 ntBASIC1.44□□□□□ -2.18
RFX2P48378 RNU6-659P-201ENST00000516454 104 ntBASIC1.44□□□□□ -2.18
RFX2P48378 RNU6-1061P-201ENST00000516530 99 ntBASIC1.44□□□□□ -2.18
RFX2P48378 RNU6-958P-201ENST00000516995 106 ntBASIC1.44□□□□□ -2.18
RFX2P48378 IGKV1-22-201ENST00000524313 326 ntBASIC1.44□□□□□ -2.18
RFX2P48378 AC090049.2-201ENST00000550377 109 ntBASIC1.44□□□□□ -2.18
RFX2P48378 AC064859.1-201ENST00000624741 174 ntBASIC1.44□□□□□ -2.18
RFX2P48378 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.44□□□□□ -2.18
RFX2P48378 AP000648.3-201ENST00000623539 4507 ntBASIC1.44□□□□□ -2.18
RFX2P48378 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
RFX2P48378 MIR302B-201ENST00000362188 73 ntBASIC1.43□□□□□ -2.18
RFX2P48378 RNU6-647P-201ENST00000364243 107 ntBASIC1.43□□□□□ -2.18
RFX2P48378 RNU6-690P-201ENST00000365242 106 ntBASIC1.43□□□□□ -2.18
RFX2P48378 Y_RNA.366-201ENST00000365540 102 ntBASIC1.43□□□□□ -2.18
RFX2P48378 Y_RNA.454-201ENST00000384224 113 ntBASIC1.43□□□□□ -2.18
RFX2P48378 AL451046.2-201ENST00000403074 277 ntBASIC1.43□□□□□ -2.18
RFX2P48378 AC019129.1-201ENST00000403786 261 ntBASIC1.43□□□□□ -2.18
RFX2P48378 RN7SKP223-201ENST00000410582 62 ntBASIC1.43□□□□□ -2.18
RFX2P48378 AL035398.1-201ENST00000430869 322 ntBASIC1.43□□□□□ -2.18
RFX2P48378 HSPE1P24-201ENST00000450782 238 ntBASIC1.43□□□□□ -2.18
RFX2P48378 RNU7-96P-201ENST00000459535 64 ntBASIC1.43□□□□□ -2.18
RFX2P48378 UBL5P3-201ENST00000475112 231 ntBASIC1.43□□□□□ -2.18
RFX2P48378 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.43□□□□□ -2.18
RFX2P48378 RNU6-322P-201ENST00000516010 103 ntBASIC1.43□□□□□ -2.18
RFX2P48378 SNORA31.4-201ENST00000516049 129 ntBASIC1.43□□□□□ -2.18
RFX2P48378 MIR4764-201ENST00000580680 88 ntBASIC1.43□□□□□ -2.18
RFX2P48378 MIR4791-201ENST00000607666 84 ntBASIC1.43□□□□□ -2.18
RFX2P48378 AC243994.1-201ENST00000618627 109 ntBASIC1.43□□□□□ -2.18
RFX2P48378 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
RFX2P48378 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RFX2P48378 RNU6-349P-201ENST00000362402 107 ntBASIC1.42□□□□□ -2.18
RFX2P48378 RNY1P6-201ENST00000384193 109 ntBASIC1.42□□□□□ -2.18
RFX2P48378 MIR520C-201ENST00000385005 87 ntBASIC1.42□□□□□ -2.18
RFX2P48378 MIR9-3-201ENST00000385084 90 ntBASIC1.42□□□□□ -2.18
RFX2P48378 SNORD41-201ENST00000386967 70 ntBASIC1.42□□□□□ -2.18
RFX2P48378 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.42□□□□□ -2.18
RFX2P48378 Y_RNA.630-201ENST00000411370 108 ntBASIC1.42□□□□□ -2.18
RFX2P48378 snoU13.9-201ENST00000458927 103 ntBASIC1.42□□□□□ -2.18
RFX2P48378 RNU7-45P-201ENST00000459460 63 ntBASIC1.42□□□□□ -2.18
RFX2P48378 RNU2-13P-201ENST00000515909 113 ntBASIC1.42□□□□□ -2.18
RFX2P48378 RN7SKP19-201ENST00000516016 252 ntBASIC1.42□□□□□ -2.18
RFX2P48378 AC019176.1-201ENST00000518519 225 ntBASIC1.42□□□□□ -2.18
RFX2P48378 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.42□□□□□ -2.18
RFX2P48378 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.42□□□□□ -2.18
RFX2P48378 RNA5SP205-201ENST00000364653 136 ntBASIC1.41□□□□□ -2.18
RFX2P48378 SNORD58C-201ENST00000365223 64 ntBASIC1.41□□□□□ -2.18
RFX2P48378 MIR30A-201ENST00000385092 71 ntBASIC1.41□□□□□ -2.18
RFX2P48378 MIR1263-201ENST00000408324 86 ntBASIC1.41□□□□□ -2.18
RFX2P48378 Y_RNA.617-201ENST00000410920 90 ntBASIC1.41□□□□□ -2.18
RFX2P48378 RPS29P29-201ENST00000456396 171 ntBASIC1.41□□□□□ -2.18
RFX2P48378 RNU7-43P-201ENST00000516554 64 ntBASIC1.41□□□□□ -2.18
RFX2P48378 RNU6-113P-201ENST00000516653 101 ntBASIC1.41□□□□□ -2.18
RFX2P48378 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.41□□□□□ -2.18
RFX2P48378 AL137067.1-201ENST00000615933 120 ntBASIC1.41□□□□□ -2.18
RFX2P48378 RNU6-1290P-201ENST00000362957 109 ntBASIC1.4□□□□□ -2.19
RFX2P48378 SNORA70.7-201ENST00000384159 133 ntBASIC1.4□□□□□ -2.19
RFX2P48378 SNORA51.10-201ENST00000384418 136 ntBASIC1.4□□□□□ -2.19
RFX2P48378 SNORA3.2-201ENST00000408221 125 ntBASIC1.4□□□□□ -2.19
RFX2P48378 RNU7-41P-201ENST00000515917 61 ntBASIC1.4□□□□□ -2.19
RFX2P48378 RN7SKP179-201ENST00000516126 217 ntBASIC1.4□□□□□ -2.19
RFX2P48378 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.4□□□□□ -2.19
RFX2P48378 AL359881.1-201ENST00000602916 267 ntBASIC1.4□□□□□ -2.19
RFX2P48378 AC008133.2-201ENST00000624540 351 ntBASIC1.4□□□□□ -2.19
RFX2P48378 WWP1P1-201ENST00000466609 2769 ntBASIC1.39□□□□□ -2.19
RFX2P48378 MIR302D-201ENST00000362275 68 ntBASIC1.39□□□□□ -2.19
RFX2P48378 SNORA24-201ENST00000384096 131 ntBASIC1.39□□□□□ -2.19
RFX2P48378 Y_RNA.537-201ENST00000384626 109 ntBASIC1.39□□□□□ -2.19
RFX2P48378 RNU6-1067P-201ENST00000384752 107 ntBASIC1.39□□□□□ -2.19
RFX2P48378 RNU6-913P-201ENST00000390913 95 ntBASIC1.39□□□□□ -2.19
RFX2P48378 RNU6-1190P-201ENST00000410811 104 ntBASIC1.39□□□□□ -2.19
RFX2P48378 RNU1-98P-201ENST00000458992 160 ntBASIC1.39□□□□□ -2.19
RFX2P48378 SNORD111.1-201ENST00000516421 86 ntBASIC1.39□□□□□ -2.19
RFX2P48378 RNU7-53P-201ENST00000516705 60 ntBASIC1.39□□□□□ -2.19
RFX2P48378 SNORA44.1-201ENST00000517031 108 ntBASIC1.39□□□□□ -2.19
RFX2P48378 MIR4513-201ENST00000581077 86 ntBASIC1.39□□□□□ -2.19
RFX2P48378 MIR7974-201ENST00000615835 79 ntBASIC1.39□□□□□ -2.19
RFX2P48378 U8.2-201ENST00000363156 134 ntBASIC1.38□□□□□ -2.19
RFX2P48378 SNORD1A-201ENST00000364968 72 ntBASIC1.38□□□□□ -2.19
RFX2P48378 RNU6-735P-201ENST00000410612 107 ntBASIC1.38□□□□□ -2.19
RFX2P48378 RNU6-947P-201ENST00000516264 106 ntBASIC1.38□□□□□ -2.19
RFX2P48378 RNU6-970P-201ENST00000516312 107 ntBASIC1.38□□□□□ -2.19
RFX2P48378 Y_RNA.712-201ENST00000517011 92 ntBASIC1.38□□□□□ -2.19
RFX2P48378 AL513534.2-201ENST00000603836 250 ntBASIC1.38□□□□□ -2.19
RFX2P48378 AC021443.1-201ENST00000604478 211 ntBASIC1.38□□□□□ -2.19
RFX2P48378 MIR3914-2-201ENST00000637339 95 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 278 ms