Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 SNORD126-201ENST00000459475 77 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 AC010205.1-201ENST00000616668 449 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 U2.1-201ENST00000618978 145 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 MIR6514-201ENST00000622549 70 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 MIR6717-201ENST00000622747 73 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 AL596211.1-201ENST00000569873 2277 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 RNY3P11-201ENST00000364153 102 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 RNA5SP245-201ENST00000364239 121 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 SNORA8.3-201ENST00000384679 139 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 MTND3P8-201ENST00000412909 339 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 AL160004.2-201ENST00000432935 350 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 RNU6-475P-201ENST00000516073 104 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 RNU6-264P-201ENST00000517134 104 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 CR383656.4-201ENST00000546909 122 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
RPL28P46779 AC138305.3-201ENST00000624988 240 ntBASIC-0.5□□□□□ -2.49
RPL28P46779 RNU6-653P-201ENST00000363074 106 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 SNORD49B-201ENST00000365172 72 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 RNU6-597P-201ENST00000365620 102 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 SNORD24-201ENST00000383884 75 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 RPL21P38-201ENST00000418090 167 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 AC108059.2-201ENST00000434626 151 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 RNU6-693P-201ENST00000516134 107 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 AP003072.1-201ENST00000531740 145 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 U7.6-201ENST00000610841 64 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 uc_338.28-201ENST00000612082 187 ntBASIC-0.51□□□□□ -2.49
RPL28P46779 RNU6-144P-201ENST00000383951 107 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 SNORA72.6-201ENST00000384520 129 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 MIR628-201ENST00000385229 95 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 HMGN2P22-201ENST00000427588 175 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 MTND1P29-201ENST00000448112 647 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 AC109327.2-201ENST00000448339 378 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.52□□□□□ -2.49
RPL28P46779 SNORD77.4-201ENST00000516158 81 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 AC138749.4-201ENST00000563970 127 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 AC141846.1-201ENST00000568348 142 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 MIR4662B-201ENST00000579498 81 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 AC011373.1-201ENST00000607270 237 ntBASIC-0.52□□□□□ -2.49
RPL28P46779 MIR148A-201ENST00000362215 68 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 RNU6-899P-201ENST00000363947 107 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 SNORA22B-201ENST00000383876 138 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 MIR196A2-201ENST00000385189 110 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 SNORA75.1-201ENST00000391130 148 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 MIR378D2-201ENST00000580636 98 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 AP001180.6-201ENST00000584918 159 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 AC099654.14-201ENST00000638599 341 ntBASIC-0.53□□□□□ -2.49
RPL28P46779 MIR655-201ENST00000362159 97 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 RNU6-888P-201ENST00000363010 101 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 RNA5SP98-201ENST00000363158 137 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 RNU6-949P-201ENST00000384040 107 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 SNORD61-201ENST00000384252 73 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 RNU6-308P-201ENST00000390957 107 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 MIR876-201ENST00000401147 81 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 RNA5SP261-201ENST00000410536 106 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.54□□□□□ -2.5
RPL28P46779 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.54□□□□□ -2.5
RPL28P46779 SNORA25.16-201ENST00000516741 121 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 RNU7-110P-201ENST00000516891 62 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 AC245505.1-201ENST00000556398 224 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 AL049861.1-201ENST00000603130 150 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 AP000770.2-201ENST00000623694 100 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 MIR4788-201ENST00000639104 80 ntBASIC-0.54□□□□□ -2.5
RPL28P46779 RNU4-80P-201ENST00000363200 141 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 SNORA63.5-201ENST00000363548 123 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 SNORD116-1-201ENST00000384335 95 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 MTND4LP11-201ENST00000422184 280 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 MTATP6P26-201ENST00000445926 662 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 RNU7-45P-201ENST00000459460 63 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 MIR5589-201ENST00000579442 60 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 AL162726.3-218ENST00000636401 95 ntBASIC-0.55□□□□□ -2.5
RPL28P46779 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.56□□□□□ -2.5
RPL28P46779 RNU6-811P-201ENST00000384069 107 ntBASIC-0.56□□□□□ -2.5
RPL28P46779 SNORA1-201ENST00000384107 130 ntBASIC-0.56□□□□□ -2.5
RPL28P46779 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.56□□□□□ -2.5
RPL28P46779 RNU6-383P-201ENST00000410864 94 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms