Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
LTBRP36941 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
LTBRP36941 SNORA6-201ENST00000384033 151 ntBASIC2.15□□□□□ -2.07
LTBRP36941 RNU6-429P-201ENST00000384582 108 ntBASIC2.15□□□□□ -2.07
LTBRP36941 MIR548A3-201ENST00000385297 97 ntBASIC2.15□□□□□ -2.07
LTBRP36941 AL035461.1-201ENST00000421490 332 ntBASIC2.15□□□□□ -2.07
LTBRP36941 RNU7-96P-201ENST00000459535 64 ntBASIC2.15□□□□□ -2.07
LTBRP36941 RNU6-998P-201ENST00000515894 101 ntBASIC2.15□□□□□ -2.07
LTBRP36941 SUMO2P16-201ENST00000519475 264 ntBASIC2.15□□□□□ -2.07
LTBRP36941 AC121758.2-201ENST00000553271 193 ntBASIC2.15□□□□□ -2.07
LTBRP36941 AC106754.2-201ENST00000623006 233 ntBASIC2.15□□□□□ -2.07
LTBRP36941 AL391516.1-201ENST00000554380 2449 ntBASIC2.15□□□□□ -2.07
LTBRP36941 MIR6073-201ENST00000352083 89 ntBASIC2.14□□□□□ -2.07
LTBRP36941 MIR302B-201ENST00000362188 73 ntBASIC2.14□□□□□ -2.07
LTBRP36941 MIR337-201ENST00000362281 93 ntBASIC2.14□□□□□ -2.07
LTBRP36941 RNU6-414P-201ENST00000363705 104 ntBASIC2.14□□□□□ -2.07
LTBRP36941 Y_RNA.528-201ENST00000384575 108 ntBASIC2.14□□□□□ -2.07
LTBRP36941 RNA5SP136-201ENST00000410906 107 ntBASIC2.14□□□□□ -2.07
LTBRP36941 AC004965.1-201ENST00000413033 213 ntBASIC2.14□□□□□ -2.07
LTBRP36941 AL035398.1-201ENST00000430869 322 ntBASIC2.14□□□□□ -2.07
LTBRP36941 MIR4287-201ENST00000579398 78 ntBASIC2.14□□□□□ -2.07
LTBRP36941 AC021443.1-201ENST00000604478 211 ntBASIC2.14□□□□□ -2.07
LTBRP36941 AL773524.1-201ENST00000614065 229 ntBASIC2.14□□□□□ -2.07
LTBRP36941 AC008555.8-201ENST00000623602 2168 ntBASIC2.14□□□□□ -2.07
LTBRP36941 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.14□□□□□ -2.07
LTBRP36941 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.14□□□□□ -2.07
LTBRP36941 RNU6-44P-201ENST00000384045 107 ntBASIC2.13□□□□□ -2.07
LTBRP36941 RNU6-439P-201ENST00000384188 106 ntBASIC2.13□□□□□ -2.07
LTBRP36941 SNORD28B-201ENST00000390993 75 ntBASIC2.13□□□□□ -2.07
LTBRP36941 AC244636.1-201ENST00000421152 228 ntBASIC2.13□□□□□ -2.07
LTBRP36941 Y_RNA.649-201ENST00000459077 103 ntBASIC2.13□□□□□ -2.07
LTBRP36941 MIR548AR-201ENST00000582191 57 ntBASIC2.13□□□□□ -2.07
LTBRP36941 HSPE1P19-201ENST00000603327 295 ntBASIC2.13□□□□□ -2.07
LTBRP36941 AC095038.3-201ENST00000634439 195 ntBASIC2.13□□□□□ -2.07
LTBRP36941 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LTBRP36941 RNU4-16P-201ENST00000364737 141 ntBASIC2.12□□□□□ -2.07
LTBRP36941 MIR194-1-201ENST00000384892 85 ntBASIC2.12□□□□□ -2.07
LTBRP36941 MIR499A-201ENST00000384903 122 ntBASIC2.12□□□□□ -2.07
LTBRP36941 MIR489-201ENST00000384923 84 ntBASIC2.12□□□□□ -2.07
LTBRP36941 RNU2-11P-201ENST00000459191 187 ntBASIC2.12□□□□□ -2.07
LTBRP36941 RNU6-917P-201ENST00000516294 104 ntBASIC2.12□□□□□ -2.07
LTBRP36941 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LTBRP36941 RNU6-661P-201ENST00000362409 107 ntBASIC2.11□□□□□ -2.07
LTBRP36941 SNORA70.7-201ENST00000384159 133 ntBASIC2.11□□□□□ -2.07
LTBRP36941 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
LTBRP36941 JTBP1-201ENST00000441314 247 ntBASIC2.11□□□□□ -2.07
LTBRP36941 RNU7-67P-201ENST00000459003 62 ntBASIC2.11□□□□□ -2.07
LTBRP36941 MIR6895-201ENST00000613497 78 ntBASIC2.11□□□□□ -2.07
LTBRP36941 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LTBRP36941 DEFA7P-201ENST00000382676 285 ntBASIC2.1□□□□□ -2.07
LTBRP36941 SNORD116-21-201ENST00000384507 92 ntBASIC2.1□□□□□ -2.07
LTBRP36941 MIR570-201ENST00000384917 97 ntBASIC2.1□□□□□ -2.07
LTBRP36941 MIR7-2-201ENST00000384970 110 ntBASIC2.1□□□□□ -2.07
LTBRP36941 MIR548A1-201ENST00000385041 97 ntBASIC2.1□□□□□ -2.07
LTBRP36941 MIR518E-201ENST00000385252 88 ntBASIC2.1□□□□□ -2.07
LTBRP36941 RPL23AP6-201ENST00000446637 472 ntBASIC2.1□□□□□ -2.07
LTBRP36941 RPS29P29-201ENST00000456396 171 ntBASIC2.1□□□□□ -2.07
LTBRP36941 SNORD13-201ENST00000459299 104 ntBASIC2.1□□□□□ -2.07
LTBRP36941 COX6CP6-201ENST00000490840 228 ntBASIC2.1□□□□□ -2.07
LTBRP36941 RNY4P20-201ENST00000516678 93 ntBASIC2.1□□□□□ -2.07
LTBRP36941 RNU6-958P-201ENST00000516995 106 ntBASIC2.1□□□□□ -2.07
LTBRP36941 SNORA74.3-201ENST00000517108 154 ntBASIC2.1□□□□□ -2.07
LTBRP36941 MIR3683-201ENST00000580847 82 ntBASIC2.1□□□□□ -2.07
LTBRP36941 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.1□□□□□ -2.07
LTBRP36941 AC080100.1-201ENST00000624239 5356 ntBASIC2.1□□□□□ -2.07
LTBRP36941 AP000648.3-201ENST00000623539 4507 ntBASIC2.09□□□□□ -2.07
LTBRP36941 RNA5SP190-201ENST00000365222 118 ntBASIC2.09□□□□□ -2.07
LTBRP36941 RNA5SP259-201ENST00000365541 109 ntBASIC2.09□□□□□ -2.07
LTBRP36941 AL161935.2-201ENST00000414627 60 ntBASIC2.09□□□□□ -2.07
LTBRP36941 AP1B1P2-201ENST00000416196 106 ntBASIC2.09□□□□□ -2.07
LTBRP36941 RNU7-164P-201ENST00000459221 62 ntBASIC2.09□□□□□ -2.07
LTBRP36941 RNU7-53P-201ENST00000516705 60 ntBASIC2.09□□□□□ -2.07
LTBRP36941 AC022254.1-201ENST00000567857 235 ntBASIC2.09□□□□□ -2.07
LTBRP36941 MIR4305-201ENST00000583252 102 ntBASIC2.09□□□□□ -2.07
LTBRP36941 AL359821.1-201ENST00000605519 182 ntBASIC2.09□□□□□ -2.07
LTBRP36941 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
LTBRP36941 AC243994.1-201ENST00000618627 109 ntBASIC2.09□□□□□ -2.07
LTBRP36941 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.09□□□□□ -2.07
LTBRP36941 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
LTBRP36941 Y_RNA.298-201ENST00000364960 107 ntBASIC2.08□□□□□ -2.08
LTBRP36941 MIR513A1-201ENST00000385138 129 ntBASIC2.08□□□□□ -2.08
LTBRP36941 RNU4-62P-201ENST00000410125 130 ntBASIC2.08□□□□□ -2.08
LTBRP36941 AL445685.2-201ENST00000422551 342 ntBASIC2.08□□□□□ -2.08
LTBRP36941 RNU2-13P-201ENST00000515909 113 ntBASIC2.08□□□□□ -2.08
LTBRP36941 SNORA31.4-201ENST00000516049 129 ntBASIC2.08□□□□□ -2.08
LTBRP36941 Y_RNA.709-201ENST00000516952 92 ntBASIC2.08□□□□□ -2.08
LTBRP36941 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
LTBRP36941 AC005336.3-201ENST00000623833 2679 ntBASIC2.07□□□□□ -2.08
LTBRP36941 AC131280.1-202ENST00000624067 4211 ntBASIC2.07□□□□□ -2.08
LTBRP36941 Y_RNA.35-201ENST00000362601 101 ntBASIC2.07□□□□□ -2.08
LTBRP36941 RNU6-1067P-201ENST00000384752 107 ntBASIC2.07□□□□□ -2.08
LTBRP36941 RNY4P18-201ENST00000391107 89 ntBASIC2.07□□□□□ -2.08
LTBRP36941 AC003989.2-201ENST00000440224 169 ntBASIC2.07□□□□□ -2.08
LTBRP36941 RNU7-45P-201ENST00000459460 63 ntBASIC2.07□□□□□ -2.08
LTBRP36941 snoU13.18-201ENST00000459483 104 ntBASIC2.07□□□□□ -2.08
LTBRP36941 TRMT112P2-201ENST00000512910 132 ntBASIC2.07□□□□□ -2.08
LTBRP36941 RNU6-589P-201ENST00000516485 107 ntBASIC2.07□□□□□ -2.08
LTBRP36941 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
LTBRP36941 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
LTBRP36941 MIR4713-201ENST00000582691 75 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms