Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC105081.1-201ENST00000617727 106 ntBASIC3.09□□□□□ -1.91
VARSP26640 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
VARSP26640 RNA5SP374-201ENST00000362939 125 ntBASIC3.08□□□□□ -1.92
VARSP26640 SNORA38-201ENST00000363946 132 ntBASIC3.08□□□□□ -1.92
VARSP26640 RNU6-1229P-201ENST00000364295 107 ntBASIC3.08□□□□□ -1.92
VARSP26640 BX510359.4-201ENST00000423750 193 ntBASIC3.08□□□□□ -1.92
VARSP26640 RPL23AP94-201ENST00000512518 302 ntBASIC3.08□□□□□ -1.92
VARSP26640 RNA5SP341-201ENST00000516261 117 ntBASIC3.08□□□□□ -1.92
VARSP26640 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VARSP26640 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
VARSP26640 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VARSP26640 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
VARSP26640 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VARSP26640 SNORD115-37-201ENST00000363768 82 ntBASIC3.07□□□□□ -1.92
VARSP26640 RNA5SP138-201ENST00000365098 114 ntBASIC3.07□□□□□ -1.92
VARSP26640 RNU6-1067P-201ENST00000384752 107 ntBASIC3.07□□□□□ -1.92
VARSP26640 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
VARSP26640 RNU6-1321P-201ENST00000390905 107 ntBASIC3.07□□□□□ -1.92
VARSP26640 RNU7-79P-201ENST00000516082 62 ntBASIC3.07□□□□□ -1.92
VARSP26640 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.07□□□□□ -1.92
VARSP26640 AC145423.2-201ENST00000610631 239 ntBASIC3.07□□□□□ -1.92
VARSP26640 MIR8055-201ENST00000610739 97 ntBASIC3.07□□□□□ -1.92
VARSP26640 MIR7106-201ENST00000612419 65 ntBASIC3.07□□□□□ -1.92
VARSP26640 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VARSP26640 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VARSP26640 Y_RNA.537-201ENST00000384626 109 ntBASIC3.06□□□□□ -1.92
VARSP26640 MIR526A1-201ENST00000384897 85 ntBASIC3.06□□□□□ -1.92
VARSP26640 MIR181B2-201ENST00000385004 89 ntBASIC3.06□□□□□ -1.92
VARSP26640 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
VARSP26640 UQCRHP3-201ENST00000451503 251 ntBASIC3.06□□□□□ -1.92
VARSP26640 RNU7-26P-201ENST00000458980 63 ntBASIC3.06□□□□□ -1.92
VARSP26640 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.06□□□□□ -1.92
VARSP26640 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.06□□□□□ -1.92
VARSP26640 MTND5P40-201ENST00000559945 246 ntBASIC3.06□□□□□ -1.92
VARSP26640 AC020891.4-201ENST00000605745 93 ntBASIC3.06□□□□□ -1.92
VARSP26640 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
VARSP26640 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VARSP26640 RNU1-109P-201ENST00000383960 147 ntBASIC3.05□□□□□ -1.92
VARSP26640 MIR29C-201ENST00000385231 88 ntBASIC3.05□□□□□ -1.92
VARSP26640 snoU13.16-201ENST00000459350 104 ntBASIC3.05□□□□□ -1.92
VARSP26640 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.05□□□□□ -1.92
VARSP26640 AC140658.3-201ENST00000567603 271 ntBASIC3.05□□□□□ -1.92
VARSP26640 AC012676.2-201ENST00000619258 186 ntBASIC3.05□□□□□ -1.92
VARSP26640 AC006386.2-201ENST00000624491 75 ntBASIC3.05□□□□□ -1.92
VARSP26640 AC012005.1-201ENST00000624575 75 ntBASIC3.05□□□□□ -1.92
VARSP26640 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.04□□□□□ -1.92
VARSP26640 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
VARSP26640 Y_RNA.173-201ENST00000363776 113 ntBASIC3.04□□□□□ -1.92
VARSP26640 Y_RNA.354-201ENST00000365448 111 ntBASIC3.04□□□□□ -1.92
VARSP26640 SNORD38.2-201ENST00000384470 69 ntBASIC3.04□□□□□ -1.92
VARSP26640 MIR597-201ENST00000384968 97 ntBASIC3.04□□□□□ -1.92
VARSP26640 AC234781.5-201ENST00000508429 271 ntBASIC3.04□□□□□ -1.92
VARSP26640 SCARNA16.3-201ENST00000516595 184 ntBASIC3.04□□□□□ -1.92
VARSP26640 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.04□□□□□ -1.92
VARSP26640 FAM106DP-201ENST00000586416 501 ntBASIC3.04□□□□□ -1.92
VARSP26640 MIR8065-201ENST00000620577 100 ntBASIC3.04□□□□□ -1.92
VARSP26640 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
VARSP26640 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
VARSP26640 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
VARSP26640 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.03□□□□□ -1.92
VARSP26640 RN7SL863P-201ENST00000462370 296 ntBASIC3.03□□□□□ -1.92
VARSP26640 RNU7-137P-201ENST00000516788 62 ntBASIC3.03□□□□□ -1.92
VARSP26640 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.03□□□□□ -1.92
VARSP26640 RPL12P50-201ENST00000603116 116 ntBASIC3.03□□□□□ -1.92
VARSP26640 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.03□□□□□ -1.92
VARSP26640 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VARSP26640 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
VARSP26640 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VARSP26640 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
VARSP26640 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.02□□□□□ -1.93
VARSP26640 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
VARSP26640 SNORD114-10-201ENST00000363409 72 ntBASIC3.02□□□□□ -1.93
VARSP26640 SNORA80A-201ENST00000363922 136 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-480P-201ENST00000384332 107 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU11-3P-201ENST00000391111 133 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-447P-201ENST00000410293 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-1118P-201ENST00000410382 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-1076P-201ENST00000410397 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-355P-201ENST00000410427 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-791P-201ENST00000410467 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-705P-201ENST00000410601 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-1100P-201ENST00000410691 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU2-7P-201ENST00000410794 178 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-860P-201ENST00000410860 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-1217P-201ENST00000411276 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU6-785P-201ENST00000411324 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 RPL23AP6-201ENST00000446637 472 ntBASIC3.02□□□□□ -1.93
VARSP26640 RNU7-48P-201ENST00000458875 63 ntBASIC3.02□□□□□ -1.93
VARSP26640 UBL5P2-201ENST00000583788 219 ntBASIC3.02□□□□□ -1.93
VARSP26640 U6.90-201ENST00000614007 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 U7.4-201ENST00000614961 63 ntBASIC3.02□□□□□ -1.93
VARSP26640 U6.70-201ENST00000620287 104 ntBASIC3.02□□□□□ -1.93
VARSP26640 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
VARSP26640 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.02□□□□□ -1.93
VARSP26640 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.01□□□□□ -1.93
VARSP26640 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.01□□□□□ -1.93
VARSP26640 Y_RNA.98-201ENST00000363109 102 ntBASIC3.01□□□□□ -1.93
VARSP26640 SNORA5B-201ENST00000363786 132 ntBASIC3.01□□□□□ -1.93
VARSP26640 RNU6-519P-201ENST00000410590 108 ntBASIC3.01□□□□□ -1.93
VARSP26640 AC009487.2-201ENST00000420969 6821 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms