Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-1009P-201ENST00000390996 107 ntBASIC0.21□□□□□ -2.38
HLA-DPA1P20036 snoU13.2-201ENST00000459201 104 ntBASIC0.21□□□□□ -2.38
HLA-DPA1P20036 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 Y_RNA.183-201ENST00000363882 113 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 RNA5SP117-201ENST00000365294 118 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 SNORA63.7-201ENST00000365579 123 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 Y_RNA.579-201ENST00000390939 94 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 Y_RNA.587-201ENST00000391210 103 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 RNU6-602P-201ENST00000411155 105 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 MIR4514-201ENST00000581410 57 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 SNORD92-201ENST00000585078 85 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 AC124312.5-201ENST00000604451 268 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.2□□□□□ -2.38
HLA-DPA1P20036 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 MIR924-201ENST00000638017 53 ntBASIC0.2□□□□□ -2.38
HLA-DPA1P20036 SNORD115-46-201ENST00000390982 71 ntBASIC0.19□□□□□ -2.38
HLA-DPA1P20036 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.19□□□□□ -2.38
HLA-DPA1P20036 Y_RNA.639-201ENST00000458981 102 ntBASIC0.19□□□□□ -2.38
HLA-DPA1P20036 SNORA25.18-201ENST00000607153 114 ntBASIC0.19□□□□□ -2.38
HLA-DPA1P20036 AC090574.1-201ENST00000623186 233 ntBASIC0.19□□□□□ -2.38
HLA-DPA1P20036 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.18□□□□□ -2.38
HLA-DPA1P20036 SNORD36C-201ENST00000516733 66 ntBASIC0.18□□□□□ -2.38
HLA-DPA1P20036 Y_RNA.715-201ENST00000517082 110 ntBASIC0.18□□□□□ -2.38
HLA-DPA1P20036 AC100767.1-201ENST00000528178 123 ntBASIC0.18□□□□□ -2.38
HLA-DPA1P20036 MIR6779-201ENST00000617283 64 ntBASIC0.18□□□□□ -2.38
HLA-DPA1P20036 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.17□□□□□ -2.38
HLA-DPA1P20036 RNU6-1272P-201ENST00000362776 107 ntBASIC0.17□□□□□ -2.38
HLA-DPA1P20036 Y_RNA.205-201ENST00000364128 113 ntBASIC0.17□□□□□ -2.38
HLA-DPA1P20036 Y_RNA.303-201ENST00000364998 94 ntBASIC0.17□□□□□ -2.38
HLA-DPA1P20036 SNORD24-201ENST00000383884 75 ntBASIC0.17□□□□□ -2.38
HLA-DPA1P20036 MTCO2P24-201ENST00000515611 426 ntBASIC0.17□□□□□ -2.38
HLA-DPA1P20036 RNU6-126P-201ENST00000516685 103 ntBASIC0.17□□□□□ -2.38
HLA-DPA1P20036 RNU2-31P-201ENST00000516954 155 ntBASIC0.17□□□□□ -2.38
HLA-DPA1P20036 RNU6-365P-201ENST00000517113 106 ntBASIC0.17□□□□□ -2.38
HLA-DPA1P20036 RNU6-1270P-201ENST00000517128 108 ntBASIC0.17□□□□□ -2.38
HLA-DPA1P20036 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.17□□□□□ -2.38
HLA-DPA1P20036 MIR3678-201ENST00000578455 94 ntBASIC0.17□□□□□ -2.38
HLA-DPA1P20036 SNORD118-201ENST00000363593 134 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 SNORD61-201ENST00000384252 73 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 MIR548A2-201ENST00000384956 97 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 MT-TF-201ENST00000387314 71 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 PMCHL1-202ENST00000423102 261 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 AL138752.1-201ENST00000452964 351 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 MTND4LP30-201ENST00000454092 297 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 SNORA62.5-201ENST00000516634 120 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 RNU6-448P-201ENST00000517052 107 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 RNU6-897P-201ENST00000517135 105 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.16□□□□□ -2.38
HLA-DPA1P20036 uc_338.22-201ENST00000622722 187 ntBASIC0.16□□□□□ -2.38
HLA-DPA1P20036 MIR330-201ENST00000362196 94 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 RNU4-67P-201ENST00000364569 141 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 RNU6-514P-201ENST00000384208 107 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 SNORA8.2-201ENST00000384372 139 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 MIR7-2-201ENST00000384970 110 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 MIR563-201ENST00000385080 79 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 SNORD12C-201ENST00000386307 89 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 SNORD77.3-201ENST00000391113 65 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 RNU7-96P-201ENST00000459535 64 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.15□□□□□ -2.39
HLA-DPA1P20036 AC023932.2-201ENST00000603176 175 ntBASIC0.15□□□□□ -2.39
HLA-DPA1P20036 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.15□□□□□ -2.39
HLA-DPA1P20036 Y_RNA.7-201ENST00000362352 102 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 Y_RNA.567-201ENST00000384736 106 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 Y_RNA.581-201ENST00000391017 97 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 MIR548I3-201ENST00000408378 149 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 RNU6-1190P-201ENST00000410811 104 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 AL358176.2-201ENST00000425769 204 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 MTND4P19-201ENST00000446659 478 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 RNU2-11P-201ENST00000459191 187 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 RNU6-507P-201ENST00000516045 100 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 RNU6-504P-201ENST00000516568 104 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 MIR4431-201ENST00000579990 94 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 RAC1P9-201ENST00000604990 392 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 AC037487.3-201ENST00000606668 112 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 MIR8087-201ENST00000612745 78 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 Y_RNA.802-201ENST00000614892 130 ntBASIC0.14□□□□□ -2.39
HLA-DPA1P20036 MIR30D-201ENST00000362283 70 ntBASIC0.13□□□□□ -2.39
HLA-DPA1P20036 SNORA25.1-201ENST00000362326 128 ntBASIC0.13□□□□□ -2.39
HLA-DPA1P20036 RNU6-888P-201ENST00000363010 101 ntBASIC0.13□□□□□ -2.39
HLA-DPA1P20036 RNU6-290P-201ENST00000365212 101 ntBASIC0.13□□□□□ -2.39
HLA-DPA1P20036 RNU6-662P-201ENST00000384253 104 ntBASIC0.13□□□□□ -2.39
HLA-DPA1P20036 MIR526A2-201ENST00000390198 65 ntBASIC0.13□□□□□ -2.39
HLA-DPA1P20036 SNORA53-201ENST00000391141 249 ntBASIC0.13□□□□□ -2.39
HLA-DPA1P20036 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
HLA-DPA1P20036 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.13□□□□□ -2.39
HLA-DPA1P20036 AC078938.1-201ENST00000620993 318 ntBASIC0.13□□□□□ -2.39
HLA-DPA1P20036 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
HLA-DPA1P20036 MTND5P20-201ENST00000448677 143 ntBASIC0.12□□□□□ -2.39
HLA-DPA1P20036 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.12□□□□□ -2.39
HLA-DPA1P20036 Y_RNA.631-201ENST00000459607 101 ntBASIC0.12□□□□□ -2.39
HLA-DPA1P20036 RNU6-998P-201ENST00000515894 101 ntBASIC0.12□□□□□ -2.39
HLA-DPA1P20036 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.12□□□□□ -2.39
HLA-DPA1P20036 MIR4795-201ENST00000584182 89 ntBASIC0.12□□□□□ -2.39
HLA-DPA1P20036 AC006006.1-201ENST00000603082 144 ntBASIC0.12□□□□□ -2.39
HLA-DPA1P20036 AC090971.5-201ENST00000621102 293 ntBASIC0.12□□□□□ -2.39
HLA-DPA1P20036 RNU6-716P-201ENST00000365621 103 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms