Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC113195.1-201ENST00000579952 141 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 Z97988.1-201ENST00000637697 135 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 AL589743.1-201ENST00000551932 2712 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 MTND4P29-201ENST00000503122 1372 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 RNU6-888P-201ENST00000363010 101 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 Y_RNA.210-201ENST00000364161 110 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 SNORA36.2-201ENST00000384004 127 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 Y_RNA.494-201ENST00000384432 111 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 SNORA8.3-201ENST00000384679 139 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 RNU6-1237P-201ENST00000384777 107 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 MIR520F-201ENST00000384824 87 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 MIR518F-201ENST00000384973 87 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 MIR216A-201ENST00000385063 110 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 AC244023.1-201ENST00000426884 112 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 MIR18B-201ENST00000454574 71 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 RNU7-62P-201ENST00000458856 62 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 RN7SL793P-201ENST00000583259 296 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 AC242498.1-201ENST00000604134 111 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 AL008718.3-201ENST00000610217 321 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 MIR8055-201ENST00000610739 97 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.44□□□□□ -2.34
XRCC1P18887 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.44□□□□□ -2.34
XRCC1P18887 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
XRCC1P18887 Y_RNA.36-201ENST00000362602 112 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 Y_RNA.535-201ENST00000384612 99 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 MIR215-201ENST00000384858 110 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 MIR520H-201ENST00000385126 88 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 RNU6-938P-201ENST00000411285 103 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 SNORD83.1-201ENST00000411362 77 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 AC113618.1-201ENST00000416747 285 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 RPL21P38-201ENST00000418090 167 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.43□□□□□ -2.34
XRCC1P18887 RPS29P24-201ENST00000486345 171 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.43□□□□□ -2.34
XRCC1P18887 SERF1AP1-201ENST00000514575 187 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 SNORA18.4-201ENST00000516440 124 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 MIR4771-2-201ENST00000577758 74 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 MIR4804-201ENST00000581683 73 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 MIR4771-1-201ENST00000582617 74 ntBASIC0.43□□□□□ -2.34
XRCC1P18887 Y_RNA.61-201ENST00000362835 102 ntBASIC0.42□□□□□ -2.34
XRCC1P18887 Y_RNA.202-201ENST00000364083 110 ntBASIC0.42□□□□□ -2.34
XRCC1P18887 RNY3P5-201ENST00000384127 102 ntBASIC0.42□□□□□ -2.34
XRCC1P18887 SNORD61-201ENST00000384252 73 ntBASIC0.42□□□□□ -2.34
XRCC1P18887 MIR140-201ENST00000385282 100 ntBASIC0.42□□□□□ -2.34
XRCC1P18887 AC090844.1-201ENST00000422019 156 ntBASIC0.42□□□□□ -2.34
XRCC1P18887 MTCO2P12-201ENST00000427426 682 ntBASIC0.42□□□□□ -2.34
XRCC1P18887 snoU13.21-201ENST00000459368 105 ntBASIC0.42□□□□□ -2.34
XRCC1P18887 RNU7-96P-201ENST00000459535 64 ntBASIC0.42□□□□□ -2.34
XRCC1P18887 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.42□□□□□ -2.34
XRCC1P18887 MIR4676-201ENST00000583078 72 ntBASIC0.42□□□□□ -2.34
XRCC1P18887 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
XRCC1P18887 Y_RNA.84-201ENST00000363011 104 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 SNORD114-23-201ENST00000363536 72 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 RNU5E-4P-201ENST00000364931 120 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 RNU6-867P-201ENST00000364956 107 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 Y_RNA.410-201ENST00000383992 113 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 RNU6-211P-201ENST00000384047 107 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 Y_RNA.527-201ENST00000384573 102 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 MIR626-201ENST00000385032 94 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 RNU6-1299P-201ENST00000516316 100 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 RNA5SP153-201ENST00000516498 76 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 MIR4680-201ENST00000580906 66 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
XRCC1P18887 Y_RNA.24-201ENST00000362508 103 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 SNORD114-26-201ENST00000363543 72 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 Y_RNA.229-201ENST00000364347 113 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 SNORA1.1-201ENST00000364671 133 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 Y_RNA.466-201ENST00000384294 113 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 MIR548A2-201ENST00000384956 97 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 RNU6-913P-201ENST00000390913 95 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 MIR938-201ENST00000401216 83 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 RNU7-56P-201ENST00000458744 62 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 MIR3171-201ENST00000584270 74 ntBASIC0.4□□□□□ -2.35
XRCC1P18887 Y_RNA.64-201ENST00000362845 102 ntBASIC0.39□□□□□ -2.35
XRCC1P18887 Y_RNA.138-201ENST00000363462 102 ntBASIC0.39□□□□□ -2.35
XRCC1P18887 Y_RNA.275-201ENST00000364726 110 ntBASIC0.39□□□□□ -2.35
XRCC1P18887 RNU6-806P-201ENST00000365147 105 ntBASIC0.39□□□□□ -2.35
XRCC1P18887 RNY1P8-201ENST00000383970 114 ntBASIC0.39□□□□□ -2.35
XRCC1P18887 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
XRCC1P18887 RNY1P4-201ENST00000384595 115 ntBASIC0.39□□□□□ -2.35
XRCC1P18887 SNORD77.3-201ENST00000391113 65 ntBASIC0.39□□□□□ -2.35
XRCC1P18887 RNU6-1338P-201ENST00000516328 91 ntBASIC0.39□□□□□ -2.35
XRCC1P18887 AC010487.4-201ENST00000637027 61 ntBASIC0.39□□□□□ -2.35
XRCC1P18887 MIR18A-201ENST00000362310 71 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 Y_RNA.16-201ENST00000362421 102 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 RNU6-1289P-201ENST00000384431 106 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 MIR588-201ENST00000384900 83 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 RNU6-1165P-201ENST00000410119 107 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 RNU6-1203P-201ENST00000410703 110 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 RNU2-70P-201ENST00000410718 179 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 snoU13.2-201ENST00000459201 104 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 SNORD36C-201ENST00000516733 66 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 RNA5SP480-201ENST00000516840 109 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 RNU6-1270P-201ENST00000517128 108 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 MIR3612-201ENST00000579753 87 ntBASIC0.38□□□□□ -2.35
XRCC1P18887 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms