Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC090255.1-201ENST00000495779 349 ntBASIC2.59□□□□□ -1.99
LIG1P18858 RNVU1-2-201ENST00000516326 135 ntBASIC2.59□□□□□ -1.99
LIG1P18858 RNU6-109P-201ENST00000516364 107 ntBASIC2.59□□□□□ -1.99
LIG1P18858 RNA5SP24-201ENST00000516478 95 ntBASIC2.59□□□□□ -1.99
LIG1P18858 RNU6-184P-201ENST00000516514 107 ntBASIC2.59□□□□□ -1.99
LIG1P18858 SCARNA16.3-201ENST00000516595 184 ntBASIC2.59□□□□□ -1.99
LIG1P18858 AC004812.1-201ENST00000540773 146 ntBASIC2.59□□□□□ -1.99
LIG1P18858 MIR2052-201ENST00000636055 55 ntBASIC2.59□□□□□ -1.99
LIG1P18858 AC092881.1-201ENST00000638218 2733 ntBASIC2.59□□□□□ -2
LIG1P18858 RNU6-1131P-201ENST00000364955 107 ntBASIC2.58□□□□□ -2
LIG1P18858 Y_RNA.531-201ENST00000384589 121 ntBASIC2.58□□□□□ -2
LIG1P18858 MIR520A-201ENST00000384862 85 ntBASIC2.58□□□□□ -2
LIG1P18858 MIR518A2-201ENST00000384966 87 ntBASIC2.58□□□□□ -2
LIG1P18858 MIR452-201ENST00000385020 85 ntBASIC2.58□□□□□ -2
LIG1P18858 POLR2J4-204ENST00000418424 324 ntBASIC2.58□□□□□ -2
LIG1P18858 UBL5P3-201ENST00000475112 231 ntBASIC2.58□□□□□ -2
LIG1P18858 RPS23P4-201ENST00000487908 423 ntBASIC2.58□□□□□ -2
LIG1P18858 AC087741.2-201ENST00000619415 172 ntBASIC2.58□□□□□ -2
LIG1P18858 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.57□□□□□ -2
LIG1P18858 RNU6-661P-201ENST00000362409 107 ntBASIC2.57□□□□□ -2
LIG1P18858 SNORD73B-201ENST00000364394 72 ntBASIC2.57□□□□□ -2
LIG1P18858 RNU6-1319P-201ENST00000390855 104 ntBASIC2.57□□□□□ -2
LIG1P18858 RNU6-747P-201ENST00000390928 104 ntBASIC2.57□□□□□ -2
LIG1P18858 RNU6-241P-201ENST00000391148 104 ntBASIC2.57□□□□□ -2
LIG1P18858 RNU6-177P-201ENST00000411257 104 ntBASIC2.57□□□□□ -2
LIG1P18858 AL512326.2-201ENST00000426359 151 ntBASIC2.57□□□□□ -2
LIG1P18858 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.57□□□□□ -2
LIG1P18858 MTATP8P2-201ENST00000435212 202 ntBASIC2.57□□□□□ -2
LIG1P18858 RPL39P25-201ENST00000449384 154 ntBASIC2.57□□□□□ -2
LIG1P18858 RNU6-893P-201ENST00000458841 100 ntBASIC2.57□□□□□ -2
LIG1P18858 MIR5007-201ENST00000583098 95 ntBASIC2.57□□□□□ -2
LIG1P18858 AL627230.6-201ENST00000611129 280 ntBASIC2.57□□□□□ -2
LIG1P18858 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LIG1P18858 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
LIG1P18858 SNORD115-19-201ENST00000363098 82 ntBASIC2.56□□□□□ -2
LIG1P18858 SNORD115-18-201ENST00000363293 82 ntBASIC2.56□□□□□ -2
LIG1P18858 SNORD115-17-201ENST00000364612 82 ntBASIC2.56□□□□□ -2
LIG1P18858 Y_RNA.299-201ENST00000364973 94 ntBASIC2.56□□□□□ -2
LIG1P18858 RNU6-49P-201ENST00000384256 107 ntBASIC2.56□□□□□ -2
LIG1P18858 MIR136-201ENST00000385207 82 ntBASIC2.56□□□□□ -2
LIG1P18858 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
LIG1P18858 RNU6-816P-201ENST00000390914 107 ntBASIC2.56□□□□□ -2
LIG1P18858 RNU6-1268P-201ENST00000391214 107 ntBASIC2.56□□□□□ -2
LIG1P18858 RNU6-1239P-201ENST00000391310 107 ntBASIC2.56□□□□□ -2
LIG1P18858 HMGN2P38-201ENST00000423806 265 ntBASIC2.56□□□□□ -2
LIG1P18858 HMGN2P19-201ENST00000425149 265 ntBASIC2.56□□□□□ -2
LIG1P18858 MIR5002-201ENST00000584713 97 ntBASIC2.56□□□□□ -2
LIG1P18858 AL590808.1-201ENST00000618696 141 ntBASIC2.56□□□□□ -2
LIG1P18858 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
LIG1P18858 Y_RNA.93-201ENST00000363066 109 ntBASIC2.55□□□□□ -2
LIG1P18858 Y_RNA.370-201ENST00000365589 108 ntBASIC2.55□□□□□ -2
LIG1P18858 MIR488-201ENST00000365739 83 ntBASIC2.55□□□□□ -2
LIG1P18858 SNORA70.7-201ENST00000384159 133 ntBASIC2.55□□□□□ -2
LIG1P18858 Y_RNA.558-201ENST00000384685 113 ntBASIC2.55□□□□□ -2
LIG1P18858 RNU2-13P-201ENST00000515909 113 ntBASIC2.55□□□□□ -2
LIG1P18858 AC141557.1-201ENST00000540982 400 ntBASIC2.55□□□□□ -2
LIG1P18858 MIR3152-201ENST00000579801 74 ntBASIC2.55□□□□□ -2
LIG1P18858 MIR3618-201ENST00000580330 88 ntBASIC2.55□□□□□ -2
LIG1P18858 AL513423.1-201ENST00000621695 132 ntBASIC2.55□□□□□ -2
LIG1P18858 AC064859.1-201ENST00000624741 174 ntBASIC2.55□□□□□ -2
LIG1P18858 MIRLET7G-201ENST00000362280 84 ntBASIC2.54□□□□□ -2
LIG1P18858 RNU6-112P-201ENST00000363599 104 ntBASIC2.54□□□□□ -2
LIG1P18858 SNORA24-201ENST00000384096 131 ntBASIC2.54□□□□□ -2
LIG1P18858 RNU6-296P-201ENST00000384608 107 ntBASIC2.54□□□□□ -2
LIG1P18858 Z98742.3-201ENST00000418637 326 ntBASIC2.54□□□□□ -2
LIG1P18858 RPL23AP6-201ENST00000446637 472 ntBASIC2.54□□□□□ -2
LIG1P18858 RPL23AP63-201ENST00000498752 471 ntBASIC2.54□□□□□ -2
LIG1P18858 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.54□□□□□ -2
LIG1P18858 RNA5SP437-201ENST00000517249 129 ntBASIC2.54□□□□□ -2
LIG1P18858 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.54□□□□□ -2
LIG1P18858 AP000553.5-201ENST00000641933 54 ntBASIC2.54□□□□□ -2
LIG1P18858 SNORD115-2-201ENST00000362842 82 ntBASIC2.53□□□□□ -2
LIG1P18858 SNORD115-20-201ENST00000365099 82 ntBASIC2.53□□□□□ -2
LIG1P18858 Y_RNA.507-201ENST00000384500 99 ntBASIC2.53□□□□□ -2
LIG1P18858 MIR516B2-201ENST00000385190 85 ntBASIC2.53□□□□□ -2
LIG1P18858 RNU2-7P-201ENST00000410794 178 ntBASIC2.53□□□□□ -2
LIG1P18858 RNA5SP450-201ENST00000411206 102 ntBASIC2.53□□□□□ -2
LIG1P18858 AC113410.1-201ENST00000505029 247 ntBASIC2.53□□□□□ -2
LIG1P18858 RNA5SP481-201ENST00000516814 122 ntBASIC2.53□□□□□ -2
LIG1P18858 DEFB131E-201ENST00000532329 154 ntBASIC2.53□□□□□ -2
LIG1P18858 AC021506.2-201ENST00000612354 169 ntBASIC2.53□□□□□ -2
LIG1P18858 MIR6873-201ENST00000622788 63 ntBASIC2.53□□□□□ -2
LIG1P18858 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.53□□□□□ -2
LIG1P18858 AC095038.3-201ENST00000634439 195 ntBASIC2.53□□□□□ -2
LIG1P18858 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
LIG1P18858 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.52□□□□□ -2.01
LIG1P18858 RNU6-363P-201ENST00000362895 105 ntBASIC2.52□□□□□ -2.01
LIG1P18858 RNU4-36P-201ENST00000364294 144 ntBASIC2.52□□□□□ -2.01
LIG1P18858 SNORA3.2-201ENST00000408221 125 ntBASIC2.52□□□□□ -2.01
LIG1P18858 RNU4-69P-201ENST00000410677 143 ntBASIC2.52□□□□□ -2.01
LIG1P18858 RNA5SP501-201ENST00000410990 112 ntBASIC2.52□□□□□ -2.01
LIG1P18858 AC093850.1-201ENST00000454121 251 ntBASIC2.52□□□□□ -2.01
LIG1P18858 RPS29P29-201ENST00000456396 171 ntBASIC2.52□□□□□ -2.01
LIG1P18858 RN7SL429P-201ENST00000479090 223 ntBASIC2.52□□□□□ -2.01
LIG1P18858 RN7SL489P-201ENST00000486185 223 ntBASIC2.52□□□□□ -2.01
LIG1P18858 RN7SL327P-201ENST00000488659 223 ntBASIC2.52□□□□□ -2.01
LIG1P18858 RNU7-53P-201ENST00000516705 60 ntBASIC2.52□□□□□ -2.01
LIG1P18858 MIR4299-201ENST00000577899 72 ntBASIC2.52□□□□□ -2.01
LIG1P18858 RN7SL853P-201ENST00000617250 223 ntBASIC2.52□□□□□ -2.01
LIG1P18858 RNU6-1099P-201ENST00000363533 107 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms