Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SNORA18.4-201ENST00000516440 124 ntBASIC0.76□□□□□ -2.29
ERCC2P18074 RNU6-958P-201ENST00000516995 106 ntBASIC0.76□□□□□ -2.29
ERCC2P18074 AP003484.1-201ENST00000530974 250 ntBASIC0.76□□□□□ -2.29
ERCC2P18074 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.76□□□□□ -2.29
ERCC2P18074 Y_RNA.176-201ENST00000363815 109 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 snoU2_19.4-201ENST00000364329 80 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 RNU6-472P-201ENST00000384299 107 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 RNU6-125P-201ENST00000384505 107 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 RNU6-1011P-201ENST00000384668 107 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 MIR1827-201ENST00000408549 66 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 AL606490.4-201ENST00000423117 127 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 RNU6-1299P-201ENST00000516316 100 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 AL117187.1-201ENST00000555482 181 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 AP000942.4-201ENST00000604811 241 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 MIR6788-201ENST00000618842 66 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 AC134878.1-201ENST00000619901 243 ntBASIC0.75□□□□□ -2.29
ERCC2P18074 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 MIR1-1-201ENST00000362147 71 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 RNU6-888P-201ENST00000363010 101 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 Y_RNA.91-201ENST00000363042 107 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 Y_RNA.122-201ENST00000363331 96 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 SNORD45.3-201ENST00000363836 72 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 RNU6-694P-201ENST00000364071 147 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 Y_RNA.396-201ENST00000383949 103 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 RNU6-484P-201ENST00000384016 107 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 MT-TN-201ENST00000387400 73 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 RNU6-205P-201ENST00000390858 107 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 SNORA40.5-201ENST00000391061 128 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 RNU2-70P-201ENST00000410718 179 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 Y_RNA.622-201ENST00000411091 108 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 RNU2-55P-201ENST00000411146 174 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 AC090844.1-201ENST00000422019 156 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.74□□□□□ -2.29
ERCC2P18074 RNU6-504P-201ENST00000516568 104 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 SNORD36C-201ENST00000516733 66 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 RNU6-453P-201ENST00000516819 85 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 MIR151B-201ENST00000584249 96 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 AP000753.3-201ENST00000604083 169 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 AL365265.1-201ENST00000621045 234 ntBASIC0.74□□□□□ -2.29
ERCC2P18074 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.74□□□□□ -2.29
ERCC2P18074 Y_RNA.66-201ENST00000362862 102 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 Y_RNA.634-201ENST00000364811 113 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 Y_RNA.304-201ENST00000365011 112 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 RNU6-580P-201ENST00000365159 107 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 Y_RNA.432-201ENST00000384087 111 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 RNU6-42P-201ENST00000384165 107 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 Y_RNA.459-201ENST00000384251 102 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 SNORA27-201ENST00000384323 126 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 RNU6-738P-201ENST00000384531 106 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 Y_RNA.518-201ENST00000384552 113 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 SNORA26-201ENST00000391286 122 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 AL606845.1-201ENST00000404881 255 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 MIR548J-201ENST00000408833 112 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 SNRPGP8-201ENST00000454064 226 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 Y_RNA.673-201ENST00000516306 88 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 MIR4282-201ENST00000583613 67 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 SNORA4-201ENST00000584302 138 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 MIR6734-201ENST00000621166 68 ntBASIC0.73□□□□□ -2.29
ERCC2P18074 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
ERCC2P18074 MIR377-201ENST00000362145 69 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 Y_RNA.47-201ENST00000362697 108 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 Y_RNA.269-201ENST00000364685 89 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 Y_RNA.416-201ENST00000384014 113 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 RNY3P5-201ENST00000384127 102 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 MIR616-201ENST00000385293 97 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 SNORD105-201ENST00000386910 85 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 snoU13.21-201ENST00000459368 105 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 MIR4643-201ENST00000577473 78 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
ERCC2P18074 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.71□□□□□ -2.3
ERCC2P18074 Y_RNA.54-201ENST00000362766 105 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 Y_RNA.199-201ENST00000364014 102 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 Y_RNA.352-201ENST00000365439 102 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 RNU6-913P-201ENST00000390913 95 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 AF228730.3-201ENST00000436691 102 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 RNU7-73P-201ENST00000458743 63 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 RPS29P24-201ENST00000486345 171 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 RNA5SP153-201ENST00000516498 76 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 RNU6-1223P-201ENST00000517124 104 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 AC011195.1-201ENST00000578177 177 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 MIR4264-201ENST00000583520 66 ntBASIC0.71□□□□□ -2.3
ERCC2P18074 RNU6-653P-201ENST00000363074 106 ntBASIC0.7□□□□□ -2.3
ERCC2P18074 Y_RNA.149-201ENST00000363558 117 ntBASIC0.7□□□□□ -2.3
ERCC2P18074 Y_RNA.277-201ENST00000364754 102 ntBASIC0.7□□□□□ -2.3
ERCC2P18074 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
ERCC2P18074 RNU6-1228P-201ENST00000391014 107 ntBASIC0.7□□□□□ -2.3
ERCC2P18074 RNU6-381P-201ENST00000391259 108 ntBASIC0.7□□□□□ -2.3
ERCC2P18074 AC244023.1-201ENST00000426884 112 ntBASIC0.7□□□□□ -2.3
ERCC2P18074 RNU7-53P-201ENST00000516705 60 ntBASIC0.7□□□□□ -2.3
ERCC2P18074 AC242498.1-201ENST00000604134 111 ntBASIC0.7□□□□□ -2.3
ERCC2P18074 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
ERCC2P18074 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
ERCC2P18074 RNU6-369P-201ENST00000362515 102 ntBASIC0.69□□□□□ -2.3
ERCC2P18074 RNU6-1309P-201ENST00000363305 108 ntBASIC0.69□□□□□ -2.3
ERCC2P18074 RNU1-119P-201ENST00000391122 165 ntBASIC0.69□□□□□ -2.3
ERCC2P18074 RNU2-38P-201ENST00000410856 79 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms