Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 MIR519E-201ENST00000385075 84 ntBASIC-1.8□□□□□ -2.7
HIST1H1DP16402 RNU6-710P-201ENST00000410424 105 ntBASIC-1.8□□□□□ -2.7
HIST1H1DP16402 RNU7-13P-201ENST00000516413 62 ntBASIC-1.8□□□□□ -2.7
HIST1H1DP16402 AC040926.1-201ENST00000530195 238 ntBASIC-1.8□□□□□ -2.7
HIST1H1DP16402 MIR548H5-201ENST00000580314 60 ntBASIC-1.8□□□□□ -2.7
HIST1H1DP16402 DISC2.1-201ENST00000612827 205 ntBASIC-1.8□□□□□ -2.7
HIST1H1DP16402 SNORD113-6-201ENST00000363345 75 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 RNU6-318P-201ENST00000384283 103 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 RNU6-95P-201ENST00000384697 107 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 SNORA40.3-201ENST00000390964 122 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 TRAJ51-201ENST00000504127 63 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 RNU6-436P-201ENST00000516171 114 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 RNU7-115P-201ENST00000516433 55 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 SNORA18.6-201ENST00000516792 115 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.81□□□□□ -2.7
HIST1H1DP16402 AC060780.3-201ENST00000589464 80 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 AC122108.2-201ENST00000611946 526 ntBASIC-1.81□□□□□ -2.7
HIST1H1DP16402 MIR342-201ENST00000362212 99 ntBASIC-1.82□□□□□ -2.7
HIST1H1DP16402 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.82□□□□□ -2.7
HIST1H1DP16402 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.82□□□□□ -2.7
HIST1H1DP16402 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.82□□□□□ -2.7
HIST1H1DP16402 RNU6-596P-201ENST00000365395 98 ntBASIC-1.82□□□□□ -2.7
HIST1H1DP16402 SNORA18-201ENST00000384416 132 ntBASIC-1.82□□□□□ -2.7
HIST1H1DP16402 RNU6-476P-201ENST00000384726 107 ntBASIC-1.82□□□□□ -2.7
HIST1H1DP16402 AC016907.1-201ENST00000419483 435 ntBASIC-1.82□□□□□ -2.7
HIST1H1DP16402 AL353813.1-201ENST00000440700 253 ntBASIC-1.82□□□□□ -2.7
HIST1H1DP16402 AC244090.1-201ENST00000441884 93 ntBASIC-1.82□□□□□ -2.7
HIST1H1DP16402 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.82□□□□□ -2.7
HIST1H1DP16402 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.83□□□□□ -2.7
HIST1H1DP16402 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.83□□□□□ -2.7
HIST1H1DP16402 RNU6-906P-201ENST00000384700 70 ntBASIC-1.83□□□□□ -2.7
HIST1H1DP16402 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.83□□□□□ -2.7
HIST1H1DP16402 MIR190B-201ENST00000401119 79 ntBASIC-1.83□□□□□ -2.7
HIST1H1DP16402 BX295541.1-201ENST00000417774 250 ntBASIC-1.83□□□□□ -2.7
HIST1H1DP16402 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.83□□□□□ -2.7
HIST1H1DP16402 AC124303.1-201ENST00000605703 360 ntBASIC-1.83□□□□□ -2.7
HIST1H1DP16402 PART1_1.1-201ENST00000611761 217 ntBASIC-1.83□□□□□ -2.7
HIST1H1DP16402 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.84□□□□□ -2.7
HIST1H1DP16402 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.84□□□□□ -2.7
HIST1H1DP16402 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.84□□□□□ -2.7
HIST1H1DP16402 AC097635.1-201ENST00000450678 155 ntBASIC-1.84□□□□□ -2.7
HIST1H1DP16402 MIR4460-201ENST00000577862 86 ntBASIC-1.84□□□□□ -2.7
HIST1H1DP16402 MIR548AY-201ENST00000617669 107 ntBASIC-1.84□□□□□ -2.7
HIST1H1DP16402 SNORA72.3-201ENST00000365074 132 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 SNORD116-9-201ENST00000384000 95 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 SNORD116-3-201ENST00000384287 95 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 SNORD116-8-201ENST00000384365 95 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 SNORD116-7-201ENST00000384404 95 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 SNORD116-5-201ENST00000384462 95 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 MIR652-201ENST00000385278 98 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 RNU2-31P-201ENST00000516954 155 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 AC019193.3-201ENST00000609144 554 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 AL157392.4-201ENST00000609756 345 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 AC007494.3-201ENST00000624660 743 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 AC132825.6-201ENST00000638861 357 ntBASIC-1.85□□□□□ -2.71
HIST1H1DP16402 SNORD114-17-201ENST00000364699 75 ntBASIC-1.86□□□□□ -2.71
HIST1H1DP16402 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.86□□□□□ -2.71
HIST1H1DP16402 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.86□□□□□ -2.71
HIST1H1DP16402 MIR548A2-201ENST00000384956 97 ntBASIC-1.86□□□□□ -2.71
HIST1H1DP16402 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.86□□□□□ -2.71
HIST1H1DP16402 SNORD42A-201ENST00000459584 64 ntBASIC-1.86□□□□□ -2.71
HIST1H1DP16402 SNORD18.2-201ENST00000459604 70 ntBASIC-1.86□□□□□ -2.71
HIST1H1DP16402 RNU6-408P-201ENST00000515910 100 ntBASIC-1.86□□□□□ -2.71
HIST1H1DP16402 RNU7-10P-201ENST00000607194 63 ntBASIC-1.86□□□□□ -2.71
HIST1H1DP16402 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.86□□□□□ -2.71
HIST1H1DP16402 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.87□□□□□ -2.71
HIST1H1DP16402 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.87□□□□□ -2.71
HIST1H1DP16402 SNORD12B-201ENST00000410433 91 ntBASIC-1.87□□□□□ -2.71
HIST1H1DP16402 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.87□□□□□ -2.71
HIST1H1DP16402 RNU7-134P-201ENST00000458997 64 ntBASIC-1.87□□□□□ -2.71
HIST1H1DP16402 AC138207.3-201ENST00000585289 166 ntBASIC-1.87□□□□□ -2.71
HIST1H1DP16402 AL080274.1-201ENST00000605565 220 ntBASIC-1.87□□□□□ -2.71
HIST1H1DP16402 AC022140.2-201ENST00000623500 188 ntBASIC-1.87□□□□□ -2.71
HIST1H1DP16402 RNU6-961P-201ENST00000363893 105 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 RNU6-297P-201ENST00000384636 107 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 MIR617-201ENST00000385030 97 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 SNORD37.1-201ENST00000390968 65 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 MIR8485-201ENST00000401372 91 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 RNU6-248P-201ENST00000410720 107 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 RNU6-479P-201ENST00000516348 105 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 AL442663.2-201ENST00000554385 511 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 MIR4273-201ENST00000582824 84 ntBASIC-1.88□□□□□ -2.71
HIST1H1DP16402 RNU6-254P-201ENST00000363377 107 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 RNU4-32P-201ENST00000363404 141 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 RNU4-20P-201ENST00000365601 151 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 AL590004.1-201ENST00000405321 300 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 HLA-S-202ENST00000425174 53 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 AC026421.1-201ENST00000519101 163 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 MIR5701-3-201ENST00000578890 82 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 MIR5701-1-201ENST00000585138 82 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 MIR5701-2-201ENST00000615634 82 ntBASIC-1.89□□□□□ -2.71
HIST1H1DP16402 MIR6841-201ENST00000637129 72 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms