Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 RNU6-958P-201ENST00000516995 106 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 MIR5692C2-201ENST00000577959 77 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 MIR4795-201ENST00000584182 89 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 AC008608.1-201ENST00000603910 127 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 AL360085.1-201ENST00000604713 532 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 SNORD38B-202ENST00000625943 69 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 MIR103A1-201ENST00000362165 78 ntBASIC0.27□□□□□ -2.37
CCDC130P13994 Y_RNA.581-201ENST00000391017 97 ntBASIC0.27□□□□□ -2.37
CCDC130P13994 MIR938-201ENST00000401216 83 ntBASIC0.27□□□□□ -2.37
CCDC130P13994 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC130P13994 AC108740.1-201ENST00000498629 225 ntBASIC0.27□□□□□ -2.37
CCDC130P13994 RNA5SP395-201ENST00000516567 118 ntBASIC0.27□□□□□ -2.37
CCDC130P13994 RNU6-897P-201ENST00000517135 105 ntBASIC0.27□□□□□ -2.37
CCDC130P13994 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.27□□□□□ -2.37
CCDC130P13994 AC090971.5-201ENST00000621102 293 ntBASIC0.27□□□□□ -2.37
CCDC130P13994 Z97988.1-201ENST00000637697 135 ntBASIC0.27□□□□□ -2.37
CCDC130P13994 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.26□□□□□ -2.37
CCDC130P13994 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
CCDC130P13994 RNA5SP517-201ENST00000364724 117 ntBASIC0.26□□□□□ -2.37
CCDC130P13994 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CCDC130P13994 SNORD24-201ENST00000383884 75 ntBASIC0.26□□□□□ -2.37
CCDC130P13994 Y_RNA.431-201ENST00000384086 102 ntBASIC0.26□□□□□ -2.37
CCDC130P13994 Y_RNA.587-201ENST00000391210 103 ntBASIC0.26□□□□□ -2.37
CCDC130P13994 SNORD100-201ENST00000408573 76 ntBASIC0.26□□□□□ -2.37
CCDC130P13994 MIR1252-201ENST00000408861 65 ntBASIC0.26□□□□□ -2.37
CCDC130P13994 RAC1P9-201ENST00000604990 392 ntBASIC0.26□□□□□ -2.37
CCDC130P13994 AC037487.3-201ENST00000606668 112 ntBASIC0.26□□□□□ -2.37
CCDC130P13994 AC010332.2-201ENST00000613083 1904 ntBASIC0.26□□□□□ -2.37
CCDC130P13994 Y_RNA.37-201ENST00000362606 108 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 Y_RNA.293-201ENST00000364908 93 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 RNU6-290P-201ENST00000365212 101 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 RNU6-514P-201ENST00000384208 107 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 SNORA27-201ENST00000384323 126 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 Y_RNA.486-201ENST00000384398 107 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 MIR526A2-201ENST00000390198 65 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 RNU6-679P-201ENST00000391003 106 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 RNU6-823P-201ENST00000391042 103 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 RPS29P24-201ENST00000486345 171 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 MTCO2P24-201ENST00000515611 426 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 RNU2-31P-201ENST00000516954 155 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 Y_RNA.721-201ENST00000517207 102 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 MIR5688-201ENST00000580619 83 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 MIR4801-201ENST00000582704 82 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 AC092634.7-201ENST00000621022 103 ntBASIC0.25□□□□□ -2.37
CCDC130P13994 SNORA25.1-201ENST00000362326 128 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 RNU4-67P-201ENST00000364569 141 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 RNU6-326P-201ENST00000365480 107 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 MIR548A2-201ENST00000384956 97 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 MIR518F-201ENST00000384973 87 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 SNORA53-201ENST00000391141 249 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 Y_RNA.645-201ENST00000391229 102 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 RNU6-101P-201ENST00000410323 104 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 RNU6-693P-201ENST00000516134 107 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC130P13994 AC090897.1-201ENST00000580909 226 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC130P13994 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 Y_RNA.804-201ENST00000615262 101 ntBASIC0.24□□□□□ -2.37
CCDC130P13994 MIR369-201ENST00000362155 70 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 SNORA1.1-201ENST00000364671 133 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 SNORD42.2-201ENST00000365570 69 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 MIR588-201ENST00000384900 83 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 MIR125B2-201ENST00000385128 89 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-1319P-201ENST00000390855 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-747P-201ENST00000390928 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-241P-201ENST00000391148 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-1165P-201ENST00000410119 107 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-447P-201ENST00000410293 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-1118P-201ENST00000410382 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-1076P-201ENST00000410397 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-355P-201ENST00000410427 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-791P-201ENST00000410467 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-705P-201ENST00000410601 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-1100P-201ENST00000410691 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-860P-201ENST00000410860 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-1217P-201ENST00000411276 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-785P-201ENST00000411324 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 PMCHL1-202ENST00000423102 261 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 SNORA40.15-201ENST00000516884 107 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 RNU6-365P-201ENST00000517113 106 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 AP003327.1-201ENST00000529684 127 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.23□□□□□ -2.37
CCDC130P13994 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 U6.90-201ENST00000614007 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 U6.70-201ENST00000620287 104 ntBASIC0.23□□□□□ -2.37
CCDC130P13994 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.22□□□□□ -2.37
CCDC130P13994 RNU6-888P-201ENST00000363010 101 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 Y_RNA.105-201ENST00000363182 111 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 Y_RNA.217-201ENST00000364214 105 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 RNU6-450P-201ENST00000364654 107 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 Y_RNA.380-201ENST00000365663 111 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 Y_RNA.389-201ENST00000383924 113 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 SNORD61-201ENST00000384252 73 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 RNU6-364P-201ENST00000384387 107 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 MIR518A1-201ENST00000385068 85 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 MIR1257-201ENST00000408490 117 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 RNU6-602P-201ENST00000411155 105 ntBASIC0.22□□□□□ -2.37
CCDC130P13994 RNU7-102P-201ENST00000458948 62 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms