Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 Y_RNA.351-201ENST00000365436 96 ntBASIC1.49□□□□□ -2.17
PF4V1P10720 SNORA25-201ENST00000384384 134 ntBASIC1.49□□□□□ -2.17
PF4V1P10720 SNORA80D-201ENST00000384488 135 ntBASIC1.49□□□□□ -2.17
PF4V1P10720 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
PF4V1P10720 Y_RNA.150-201ENST00000363562 102 ntBASIC1.48□□□□□ -2.17
PF4V1P10720 MIR1185-1-201ENST00000408598 86 ntBASIC1.48□□□□□ -2.17
PF4V1P10720 AL591704.2-201ENST00000421658 181 ntBASIC1.48□□□□□ -2.17
PF4V1P10720 AL392103.1-201ENST00000447000 198 ntBASIC1.48□□□□□ -2.17
PF4V1P10720 SNORD79.1-201ENST00000516069 84 ntBASIC1.48□□□□□ -2.17
PF4V1P10720 MIR548AO-201ENST00000579992 96 ntBASIC1.48□□□□□ -2.17
PF4V1P10720 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PF4V1P10720 Y_RNA.338-201ENST00000365320 114 ntBASIC1.47□□□□□ -2.17
PF4V1P10720 Y_RNA.363-201ENST00000365529 113 ntBASIC1.47□□□□□ -2.17
PF4V1P10720 MIR222-201ENST00000384992 110 ntBASIC1.47□□□□□ -2.17
PF4V1P10720 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
PF4V1P10720 PCNPP3-201ENST00000393579 471 ntBASIC1.47□□□□□ -2.17
PF4V1P10720 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.47□□□□□ -2.17
PF4V1P10720 RNU7-70P-201ENST00000516941 66 ntBASIC1.47□□□□□ -2.17
PF4V1P10720 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.47□□□□□ -2.17
PF4V1P10720 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.47□□□□□ -2.17
PF4V1P10720 AP000942.3-201ENST00000603702 160 ntBASIC1.47□□□□□ -2.17
PF4V1P10720 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PF4V1P10720 MIR302B-201ENST00000362188 73 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 RNU1-17P-201ENST00000363022 152 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 RNU6-818P-201ENST00000364837 108 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 RNU6-907P-201ENST00000390924 102 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 Y_RNA.580-201ENST00000391004 95 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 SUMO2P12-201ENST00000405924 140 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 MIR1302-7-201ENST00000408841 72 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 RNA5SP338-201ENST00000410495 85 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 RNU2-11P-201ENST00000459191 187 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.46□□□□□ -2.18
PF4V1P10720 MIR2115-201ENST00000516657 100 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 AC019288.1-201ENST00000557918 224 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.46□□□□□ -2.18
PF4V1P10720 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 SEPT14P17-201ENST00000617978 177 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 AC084768.2-201ENST00000622736 221 ntBASIC1.46□□□□□ -2.18
PF4V1P10720 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PF4V1P10720 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PF4V1P10720 MIR26B-201ENST00000362251 77 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 RNU6-1082P-201ENST00000364574 107 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 SNORA16.1-201ENST00000364597 132 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 RNU6-396P-201ENST00000365369 105 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 SNORD37.2-201ENST00000391075 66 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 MIR548I3-201ENST00000408378 149 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 RNU6-394P-201ENST00000410735 107 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 AC003989.2-201ENST00000440224 169 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 RNU7-21P-201ENST00000459430 62 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 AC108729.3-201ENST00000513484 108 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 RNU6-1149P-201ENST00000516810 97 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 SCARNA15-202ENST00000516881 127 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 AC027335.2-201ENST00000624030 375 ntBASIC1.45□□□□□ -2.18
PF4V1P10720 MIR342-201ENST00000362212 99 ntBASIC1.44□□□□□ -2.18
PF4V1P10720 Y_RNA.180-201ENST00000363867 113 ntBASIC1.44□□□□□ -2.18
PF4V1P10720 SNORA25.8-201ENST00000364831 128 ntBASIC1.44□□□□□ -2.18
PF4V1P10720 RNU6-1336P-201ENST00000383886 109 ntBASIC1.44□□□□□ -2.18
PF4V1P10720 SNORA75.2-201ENST00000391138 150 ntBASIC1.44□□□□□ -2.18
PF4V1P10720 SNORA75.3-201ENST00000391231 150 ntBASIC1.44□□□□□ -2.18
PF4V1P10720 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
PF4V1P10720 DNAJC19P9-201ENST00000555084 351 ntBASIC1.44□□□□□ -2.18
PF4V1P10720 AC131055.1-201ENST00000584626 316 ntBASIC1.44□□□□□ -2.18
PF4V1P10720 AC091932.4-201ENST00000623386 200 ntBASIC1.44□□□□□ -2.18
PF4V1P10720 RNA5SP190-201ENST00000365222 118 ntBASIC1.43□□□□□ -2.18
PF4V1P10720 RNU6-449P-201ENST00000383914 107 ntBASIC1.43□□□□□ -2.18
PF4V1P10720 RNU6-913P-201ENST00000390913 95 ntBASIC1.43□□□□□ -2.18
PF4V1P10720 RNA5SP261-201ENST00000410536 106 ntBASIC1.43□□□□□ -2.18
PF4V1P10720 AL603825.1-201ENST00000438481 80 ntBASIC1.43□□□□□ -2.18
PF4V1P10720 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.43□□□□□ -2.18
PF4V1P10720 RNU7-90P-201ENST00000459216 62 ntBASIC1.43□□□□□ -2.18
PF4V1P10720 Y_RNA.676-201ENST00000516393 96 ntBASIC1.43□□□□□ -2.18
PF4V1P10720 AL020996.3-201ENST00000606617 222 ntBASIC1.43□□□□□ -2.18
PF4V1P10720 MIR8055-201ENST00000610739 97 ntBASIC1.43□□□□□ -2.18
PF4V1P10720 Y_RNA.52-201ENST00000362760 96 ntBASIC1.42□□□□□ -2.18
PF4V1P10720 RNU1-133P-201ENST00000364867 167 ntBASIC1.42□□□□□ -2.18
PF4V1P10720 MT-TN-201ENST00000387400 73 ntBASIC1.42□□□□□ -2.18
PF4V1P10720 RNU6-613P-201ENST00000410412 108 ntBASIC1.42□□□□□ -2.18
PF4V1P10720 CYCSP49-201ENST00000420810 319 ntBASIC1.42□□□□□ -2.18
PF4V1P10720 MIR502-201ENST00000606349 86 ntBASIC1.42□□□□□ -2.18
PF4V1P10720 AC104465.1-201ENST00000611365 139 ntBASIC1.42□□□□□ -2.18
PF4V1P10720 MIR3658-201ENST00000636291 56 ntBASIC1.42□□□□□ -2.18
PF4V1P10720 Z97988.1-201ENST00000637697 135 ntBASIC1.42□□□□□ -2.18
PF4V1P10720 MTND5P32-201ENST00000560711 1802 ntBASIC1.42□□□□□ -2.18
PF4V1P10720 SNORA1.1-201ENST00000364671 133 ntBASIC1.41□□□□□ -2.18
PF4V1P10720 RNU6-588P-201ENST00000410281 105 ntBASIC1.41□□□□□ -2.18
PF4V1P10720 MRPL35P3-201ENST00000421557 364 ntBASIC1.41□□□□□ -2.18
PF4V1P10720 AC063976.4-201ENST00000421971 163 ntBASIC1.41□□□□□ -2.18
PF4V1P10720 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.41□□□□□ -2.18
PF4V1P10720 MIR3144-201ENST00000579460 79 ntBASIC1.41□□□□□ -2.18
PF4V1P10720 Y_RNA.778-201ENST00000620203 90 ntBASIC1.41□□□□□ -2.18
PF4V1P10720 MIR6516-201ENST00000630554 81 ntBASIC1.41□□□□□ -2.18
PF4V1P10720 AL596211.1-201ENST00000569873 2277 ntBASIC1.41□□□□□ -2.18
PF4V1P10720 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
PF4V1P10720 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.18
PF4V1P10720 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
PF4V1P10720 Y_RNA.330-201ENST00000365230 109 ntBASIC1.4□□□□□ -2.19
PF4V1P10720 Y_RNA.464-201ENST00000384282 110 ntBASIC1.4□□□□□ -2.19
PF4V1P10720 Y_RNA.497-201ENST00000384447 98 ntBASIC1.4□□□□□ -2.19
PF4V1P10720 MIR618-201ENST00000385287 98 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms