Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RNU6-1081P-201ENST00000384537 107 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 Y_RNA.525-201ENST00000384570 113 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 SNORD116-19-201ENST00000384729 92 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 RNU6-1168P-201ENST00000390831 104 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 AC008267.6-201ENST00000441664 139 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 AC009474.2-201ENST00000451383 136 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.94□□□□□ -2.1
SNRPA1P09661 RNA5SP236-201ENST00000516169 116 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 RNU6-313P-201ENST00000516317 112 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 RNU6-479P-201ENST00000516348 105 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 SCARNA15-202ENST00000516881 127 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 AP003484.1-201ENST00000530974 250 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.94□□□□□ -2.1
SNRPA1P09661 Y_RNA.757-201ENST00000578934 114 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 MIR3121-201ENST00000579680 77 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 MIR548AI-201ENST00000579940 88 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 RNY1P10-201ENST00000363268 113 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 Y_RNA.127-201ENST00000363386 109 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 SNORA2.2-201ENST00000365473 135 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 RNU6-80P-201ENST00000384195 107 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 MIR526A1-201ENST00000384897 85 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 MIR452-201ENST00000385020 85 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.93□□□□□ -2.1
SNRPA1P09661 RNU7-107P-201ENST00000459121 61 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 Y_RNA.651-201ENST00000459380 103 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 RNU7-181P-201ENST00000517234 74 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 AL022345.2-201ENST00000606307 135 ntBASIC1.93□□□□□ -2.1
SNRPA1P09661 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNRPA1P09661 ZNF209P-201ENST00000593450 2304 ntBASIC1.92□□□□□ -2.1
SNRPA1P09661 Y_RNA.114-201ENST00000363265 113 ntBASIC1.92□□□□□ -2.1
SNRPA1P09661 AC004965.1-201ENST00000413033 213 ntBASIC1.92□□□□□ -2.1
SNRPA1P09661 AC022254.1-201ENST00000567857 235 ntBASIC1.92□□□□□ -2.1
SNRPA1P09661 AC106754.2-201ENST00000623006 233 ntBASIC1.92□□□□□ -2.1
SNRPA1P09661 AC095038.3-201ENST00000634439 195 ntBASIC1.92□□□□□ -2.1
SNRPA1P09661 AL442644.1-201ENST00000454390 3105 ntBASIC1.92□□□□□ -2.1
SNRPA1P09661 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.91□□□□□ -2.1
SNRPA1P09661 MIR337-201ENST00000362281 93 ntBASIC1.91□□□□□ -2.1
SNRPA1P09661 Y_RNA.440-201ENST00000384120 114 ntBASIC1.91□□□□□ -2.1
SNRPA1P09661 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.91□□□□□ -2.1
SNRPA1P09661 MTATP6P21-201ENST00000440681 189 ntBASIC1.91□□□□□ -2.1
SNRPA1P09661 AC087499.4-201ENST00000448505 178 ntBASIC1.91□□□□□ -2.1
SNRPA1P09661 RNU6-830P-201ENST00000516353 107 ntBASIC1.91□□□□□ -2.1
SNRPA1P09661 SNORA18.7-201ENST00000516910 131 ntBASIC1.91□□□□□ -2.1
SNRPA1P09661 SUMO2P16-201ENST00000519475 264 ntBASIC1.91□□□□□ -2.1
SNRPA1P09661 SNORA7.1-201ENST00000363750 139 ntBASIC1.9□□□□□ -2.11
SNRPA1P09661 Y_RNA.241-201ENST00000364470 117 ntBASIC1.9□□□□□ -2.11
SNRPA1P09661 Y_RNA.494-201ENST00000384432 111 ntBASIC1.9□□□□□ -2.11
SNRPA1P09661 MIR136-201ENST00000385207 82 ntBASIC1.9□□□□□ -2.11
SNRPA1P09661 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SNRPA1P09661 U8.17-201ENST00000391292 132 ntBASIC1.9□□□□□ -2.11
SNRPA1P09661 AL354695.1-201ENST00000427935 228 ntBASIC1.9□□□□□ -2.11
SNRPA1P09661 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.9□□□□□ -2.11
SNRPA1P09661 MIR4421-201ENST00000578133 69 ntBASIC1.9□□□□□ -2.11
SNRPA1P09661 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SNRPA1P09661 MIR342-201ENST00000362212 99 ntBASIC1.89□□□□□ -2.11
SNRPA1P09661 Y_RNA.280-201ENST00000364765 112 ntBASIC1.89□□□□□ -2.11
SNRPA1P09661 AL158147.1-201ENST00000443970 75 ntBASIC1.89□□□□□ -2.11
SNRPA1P09661 FAM106DP-201ENST00000586416 501 ntBASIC1.89□□□□□ -2.11
SNRPA1P09661 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
SNRPA1P09661 RNU6-1123P-201ENST00000362347 106 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 RNU6-414P-201ENST00000363705 104 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 Y_RNA.226-201ENST00000364337 114 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 MIR194-1-201ENST00000384892 85 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 MIR1304-201ENST00000408243 91 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 MIR1267-201ENST00000408723 78 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 SNX2P2-201ENST00000424553 323 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 RPS26P48-201ENST00000491713 339 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 RNU6-659P-201ENST00000516454 104 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 AC090821.2-201ENST00000523552 176 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.88□□□□□ -2.11
SNRPA1P09661 AC108081.1-201ENST00000604358 221 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
SNRPA1P09661 RNU6-1290P-201ENST00000362957 109 ntBASIC1.87□□□□□ -2.11
SNRPA1P09661 Y_RNA.327-201ENST00000365201 102 ntBASIC1.87□□□□□ -2.11
SNRPA1P09661 Y_RNA.351-201ENST00000365436 96 ntBASIC1.87□□□□□ -2.11
SNRPA1P09661 SNORA27-201ENST00000384323 126 ntBASIC1.87□□□□□ -2.11
SNRPA1P09661 RNU6-772P-201ENST00000516042 105 ntBASIC1.87□□□□□ -2.11
SNRPA1P09661 RNU7-70P-201ENST00000516941 66 ntBASIC1.87□□□□□ -2.11
SNRPA1P09661 RNU1-92P-201ENST00000517017 135 ntBASIC1.87□□□□□ -2.11
SNRPA1P09661 AC090049.2-201ENST00000550377 109 ntBASIC1.87□□□□□ -2.11
SNRPA1P09661 RNA5SP205-201ENST00000364653 136 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 SNORD28B-201ENST00000390993 75 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 SNORA40.5-201ENST00000391061 128 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.86□□□□□ -2.11
SNRPA1P09661 AL161935.2-201ENST00000414627 60 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.86□□□□□ -2.11
SNRPA1P09661 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 JTBP1-201ENST00000441314 247 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 SNORD123-201ENST00000459473 70 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 RNU6-917P-201ENST00000516294 104 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 RNU6-1061P-201ENST00000516530 99 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 AC133485.4-201ENST00000561835 220 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 AC138907.4-201ENST00000570107 226 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.86□□□□□ -2.11
SNRPA1P09661 MIR3198-2-201ENST00000577868 80 ntBASIC1.86□□□□□ -2.11
SNRPA1P09661 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 420.2 ms