Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AC242498.1-201ENST00000604134 111 ntBASIC0.55□□□□□ -2.32
MRPL3P09001 AL590095.2-201ENST00000604136 117 ntBASIC0.55□□□□□ -2.32
MRPL3P09001 AP000942.4-201ENST00000604811 241 ntBASIC0.55□□□□□ -2.32
MRPL3P09001 SNORD115-40-201ENST00000606510 82 ntBASIC0.55□□□□□ -2.32
MRPL3P09001 uc_338.6-201ENST00000613544 171 ntBASIC0.55□□□□□ -2.32
MRPL3P09001 AC099654.10-201ENST00000640395 161 ntBASIC0.55□□□□□ -2.32
MRPL3P09001 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.55□□□□□ -2.32
MRPL3P09001 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
MRPL3P09001 MIR96-201ENST00000362288 78 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 Y_RNA.23-201ENST00000362496 106 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 Y_RNA.54-201ENST00000362766 105 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 SNORD113.3-201ENST00000364630 78 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 RNU6-580P-201ENST00000365159 107 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 Y_RNA.352-201ENST00000365439 102 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 SNORA1-201ENST00000384107 130 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 SNORA2B-201ENST00000384583 137 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 MIR616-201ENST00000385293 97 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 HMGN1P33-201ENST00000432945 451 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 AC087499.4-201ENST00000448505 178 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 Y_RNA.668-201ENST00000516233 93 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 RNU6-1299P-201ENST00000516316 100 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 Y_RNA.679-201ENST00000516416 91 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 Y_RNA.680-201ENST00000516441 93 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 RNU6-958P-201ENST00000516995 106 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 AC004812.1-201ENST00000540773 146 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 MIR4498-201ENST00000577599 66 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 MIR8055-201ENST00000610739 97 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 AC104465.1-201ENST00000611365 139 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 AL442067.1-201ENST00000613261 223 ntBASIC0.54□□□□□ -2.32
MRPL3P09001 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.53□□□□□ -2.32
MRPL3P09001 Y_RNA.149-201ENST00000363558 117 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 Y_RNA.168-201ENST00000363740 102 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 Y_RNA.292-201ENST00000364904 97 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 RNU6-396P-201ENST00000365369 105 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 RNU6-1067P-201ENST00000384752 107 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 RNU6-205P-201ENST00000390858 107 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 SNORD89-201ENST00000390981 114 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 SNORA40.5-201ENST00000391061 128 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 SNORD77.3-201ENST00000391113 65 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 SNORD111-201ENST00000408139 94 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 RNU6-1190P-201ENST00000410811 104 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 RNU6-321P-201ENST00000410912 106 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 RNU2-55P-201ENST00000411146 174 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 AC015818.7-201ENST00000428754 109 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 AC087499.7-201ENST00000441958 109 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 RNU7-67P-201ENST00000459003 62 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 RNU6-1132P-201ENST00000459214 107 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 snoU13.16-201ENST00000459350 104 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 MIR2115-201ENST00000516657 100 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 AC134878.1-201ENST00000619901 243 ntBASIC0.53□□□□□ -2.32
MRPL3P09001 Y_RNA.432-201ENST00000384087 111 ntBASIC0.52□□□□□ -2.33
MRPL3P09001 RNY3P5-201ENST00000384127 102 ntBASIC0.52□□□□□ -2.33
MRPL3P09001 SNORA27-201ENST00000384323 126 ntBASIC0.52□□□□□ -2.33
MRPL3P09001 Y_RNA.477-201ENST00000384352 108 ntBASIC0.52□□□□□ -2.33
MRPL3P09001 FABP5P4-201ENST00000437203 171 ntBASIC0.52□□□□□ -2.33
MRPL3P09001 AL138752.1-201ENST00000452964 351 ntBASIC0.52□□□□□ -2.33
MRPL3P09001 RNA5SP153-201ENST00000516498 76 ntBASIC0.52□□□□□ -2.33
MRPL3P09001 RNU6-504P-201ENST00000516568 104 ntBASIC0.52□□□□□ -2.33
MRPL3P09001 AL353765.1-201ENST00000605514 183 ntBASIC0.52□□□□□ -2.33
MRPL3P09001 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.52□□□□□ -2.33
MRPL3P09001 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
MRPL3P09001 MIR377-201ENST00000362145 69 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 Y_RNA.162-201ENST00000363683 102 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 Y_RNA.269-201ENST00000364685 89 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 RNY4P28-201ENST00000365281 93 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 RNU4-17P-201ENST00000365598 141 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 Y_RNA.440-201ENST00000384120 114 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 SNORD58.1-201ENST00000391313 66 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 MIR1827-201ENST00000408549 66 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 RNU2-70P-201ENST00000410718 179 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.51□□□□□ -2.33
MRPL3P09001 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.51□□□□□ -2.33
MRPL3P09001 RNU7-73P-201ENST00000458743 63 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 U7.7-201ENST00000459276 60 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 RPS29P24-201ENST00000486345 171 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 AC108729.3-201ENST00000513484 108 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 Y_RNA.673-201ENST00000516306 88 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 AC133485.1-201ENST00000567176 124 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 AC138907.6-201ENST00000568401 126 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 MIR6740-201ENST00000618268 113 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 7SK.10-201ENST00000621414 298 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 U6.104-201ENST00000637979 90 ntBASIC0.51□□□□□ -2.33
MRPL3P09001 SNORD27-201ENST00000363981 72 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 Y_RNA.199-201ENST00000364014 102 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 Y_RNA.288-201ENST00000364854 92 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 RNU6-574P-201ENST00000384265 107 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 MT-TN-201ENST00000387400 73 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 SNORD99-201ENST00000408612 74 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 SNORD83.1-201ENST00000411362 77 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.5□□□□□ -2.33
MRPL3P09001 AC107297.1-201ENST00000459991 176 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 AC113410.1-201ENST00000505029 247 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 RNU6-1110P-201ENST00000516462 101 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 RNA5SP102-201ENST00000516865 106 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 Z97988.1-201ENST00000637697 135 ntBASIC0.5□□□□□ -2.33
MRPL3P09001 RNY1P10-201ENST00000363268 113 ntBASIC0.49□□□□□ -2.33
MRPL3P09001 Y_RNA.262-201ENST00000364641 102 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms