Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 Y_RNA.634-201ENST00000364811 113 ntBASIC0.59□□□□□ -2.31
VIMP08670 SNORA36.2-201ENST00000384004 127 ntBASIC0.59□□□□□ -2.31
VIMP08670 MIR520H-201ENST00000385126 88 ntBASIC0.59□□□□□ -2.31
VIMP08670 SNORA26-201ENST00000391286 122 ntBASIC0.59□□□□□ -2.31
VIMP08670 Y_RNA.622-201ENST00000411091 108 ntBASIC0.59□□□□□ -2.31
VIMP08670 RNU2-55P-201ENST00000411146 174 ntBASIC0.59□□□□□ -2.31
VIMP08670 AL138752.1-201ENST00000452964 351 ntBASIC0.59□□□□□ -2.31
VIMP08670 SNORD2.1-201ENST00000458762 69 ntBASIC0.59□□□□□ -2.31
VIMP08670 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
VIMP08670 U2.14-201ENST00000615943 113 ntBASIC0.59□□□□□ -2.31
VIMP08670 MIR6740-201ENST00000618268 113 ntBASIC0.59□□□□□ -2.31
VIMP08670 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
VIMP08670 snoU2_19.4-201ENST00000364329 80 ntBASIC0.58□□□□□ -2.32
VIMP08670 RNY1P8-201ENST00000383970 114 ntBASIC0.58□□□□□ -2.32
VIMP08670 Y_RNA.432-201ENST00000384087 111 ntBASIC0.58□□□□□ -2.32
VIMP08670 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
VIMP08670 MIR573-201ENST00000384964 99 ntBASIC0.58□□□□□ -2.32
VIMP08670 AL157398.1-201ENST00000452981 186 ntBASIC0.58□□□□□ -2.32
VIMP08670 SNRPGP8-201ENST00000454064 226 ntBASIC0.58□□□□□ -2.32
VIMP08670 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.58□□□□□ -2.32
VIMP08670 MTATP8P1-201ENST00000467115 207 ntBASIC0.58□□□□□ -2.32
VIMP08670 RNU6-635P-201ENST00000516651 102 ntBASIC0.58□□□□□ -2.32
VIMP08670 RNU6-453P-201ENST00000516819 85 ntBASIC0.58□□□□□ -2.32
VIMP08670 MIR4676-201ENST00000583078 72 ntBASIC0.58□□□□□ -2.32
VIMP08670 AC020891.4-201ENST00000605745 93 ntBASIC0.58□□□□□ -2.32
VIMP08670 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.82-201ENST00000363000 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.92-201ENST00000363043 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.235-201ENST00000364412 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 SNORA63C-201ENST00000364578 129 ntBASIC0.57□□□□□ -2.32
VIMP08670 SNORA1.1-201ENST00000364671 133 ntBASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.306-201ENST00000365015 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.312-201ENST00000365089 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.322-201ENST00000365151 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
VIMP08670 RNY3P5-201ENST00000384127 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 AL606845.1-201ENST00000404881 255 ntBASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.650-201ENST00000459002 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 RNU2-11P-201ENST00000459191 187 ntBASIC0.57□□□□□ -2.32
VIMP08670 RNA5SP153-201ENST00000516498 76 ntBASIC0.57□□□□□ -2.32
VIMP08670 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.777-201ENST00000516982 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 MIR4804-201ENST00000581683 73 ntBASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.771-201ENST00000598668 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.789-201ENST00000622480 102 ntBASIC0.57□□□□□ -2.32
VIMP08670 MIR6767-201ENST00000637302 66 ntBASIC0.57□□□□□ -2.32
VIMP08670 AC010332.2-201ENST00000613083 1904 ntBASIC0.57□□□□□ -2.32
VIMP08670 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VIMP08670 Y_RNA.7-201ENST00000362352 102 ntBASIC0.56□□□□□ -2.32
VIMP08670 Y_RNA.11-201ENST00000362375 109 ntBASIC0.56□□□□□ -2.32
VIMP08670 RNU6-1309P-201ENST00000363305 108 ntBASIC0.56□□□□□ -2.32
VIMP08670 RNU6-238P-201ENST00000363313 106 ntBASIC0.56□□□□□ -2.32
VIMP08670 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
VIMP08670 Y_RNA.590-201ENST00000410140 107 ntBASIC0.56□□□□□ -2.32
VIMP08670 RNU6-1190P-201ENST00000410811 104 ntBASIC0.56□□□□□ -2.32
VIMP08670 RNU6-602P-201ENST00000411155 105 ntBASIC0.56□□□□□ -2.32
VIMP08670 RNU7-96P-201ENST00000459535 64 ntBASIC0.56□□□□□ -2.32
VIMP08670 RNU6-998P-201ENST00000515894 101 ntBASIC0.56□□□□□ -2.32
VIMP08670 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
VIMP08670 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.56□□□□□ -2.32
VIMP08670 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
VIMP08670 MIR335-201ENST00000362173 94 ntBASIC0.55□□□□□ -2.32
VIMP08670 RNU6-1189P-201ENST00000383958 107 ntBASIC0.55□□□□□ -2.32
VIMP08670 Y_RNA.410-201ENST00000383992 113 ntBASIC0.55□□□□□ -2.32
VIMP08670 Y_RNA.440-201ENST00000384120 114 ntBASIC0.55□□□□□ -2.32
VIMP08670 MIR588-201ENST00000384900 83 ntBASIC0.55□□□□□ -2.32
VIMP08670 MIR616-201ENST00000385293 97 ntBASIC0.55□□□□□ -2.32
VIMP08670 SNORD77.3-201ENST00000391113 65 ntBASIC0.55□□□□□ -2.32
VIMP08670 MIR548I3-201ENST00000408378 149 ntBASIC0.55□□□□□ -2.32
VIMP08670 RNU6-177P-201ENST00000411257 104 ntBASIC0.55□□□□□ -2.32
VIMP08670 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.55□□□□□ -2.32
VIMP08670 RNA5SP102-201ENST00000516865 106 ntBASIC0.55□□□□□ -2.32
VIMP08670 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
VIMP08670 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
VIMP08670 MIR342-201ENST00000362212 99 ntBASIC0.54□□□□□ -2.32
VIMP08670 Y_RNA.199-201ENST00000364014 102 ntBASIC0.54□□□□□ -2.32
VIMP08670 Y_RNA.304-201ENST00000365011 112 ntBASIC0.54□□□□□ -2.32
VIMP08670 Y_RNA.422-201ENST00000384054 114 ntBASIC0.54□□□□□ -2.32
VIMP08670 Y_RNA.483-201ENST00000384380 101 ntBASIC0.54□□□□□ -2.32
VIMP08670 MT-TW-201ENST00000387382 68 ntBASIC0.54□□□□□ -2.32
VIMP08670 RNU6-1228P-201ENST00000391014 107 ntBASIC0.54□□□□□ -2.32
VIMP08670 RNU6-1165P-201ENST00000410119 107 ntBASIC0.54□□□□□ -2.32
VIMP08670 MIR18B-201ENST00000454574 71 ntBASIC0.54□□□□□ -2.32
VIMP08670 RNU7-56P-201ENST00000458744 62 ntBASIC0.54□□□□□ -2.32
VIMP08670 Y_RNA.679-201ENST00000516416 91 ntBASIC0.54□□□□□ -2.32
VIMP08670 AP003072.1-201ENST00000531740 145 ntBASIC0.54□□□□□ -2.32
VIMP08670 AC097639.2-201ENST00000603159 172 ntBASIC0.54□□□□□ -2.32
VIMP08670 AL365265.1-201ENST00000621045 234 ntBASIC0.54□□□□□ -2.32
VIMP08670 MIR8062-201ENST00000621515 85 ntBASIC0.54□□□□□ -2.32
VIMP08670 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.53□□□□□ -2.32
VIMP08670 SNORA1-201ENST00000384107 130 ntBASIC0.53□□□□□ -2.32
VIMP08670 Y_RNA.461-201ENST00000384263 103 ntBASIC0.53□□□□□ -2.32
VIMP08670 RNU6-1237P-201ENST00000384777 107 ntBASIC0.53□□□□□ -2.32
VIMP08670 MIR1302-6-201ENST00000408466 90 ntBASIC0.53□□□□□ -2.32
VIMP08670 snoU13.2-201ENST00000459201 104 ntBASIC0.53□□□□□ -2.32
VIMP08670 Y_RNA.720-201ENST00000517166 92 ntBASIC0.53□□□□□ -2.32
VIMP08670 AC004812.1-201ENST00000540773 146 ntBASIC0.53□□□□□ -2.32
VIMP08670 AL442663.2-201ENST00000554385 511 ntBASIC0.53□□□□□ -2.32
VIMP08670 MIR3612-201ENST00000579753 87 ntBASIC0.53□□□□□ -2.32
VIMP08670 Y_RNA.23-201ENST00000362496 106 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms