Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 MIRLET7C-201ENST00000362160 84 ntBASIC2.65□□□□□ -1.99
NEFMP07197 Y_RNA.78-201ENST00000362970 110 ntBASIC2.65□□□□□ -1.99
NEFMP07197 SNORA27-201ENST00000384323 126 ntBASIC2.65□□□□□ -1.99
NEFMP07197 MIR1289-2-201ENST00000408360 111 ntBASIC2.65□□□□□ -1.99
NEFMP07197 RN7SKP200-201ENST00000410564 320 ntBASIC2.65□□□□□ -1.99
NEFMP07197 RNU7-96P-201ENST00000459535 64 ntBASIC2.65□□□□□ -1.99
NEFMP07197 RNA5SP137-201ENST00000516833 135 ntBASIC2.65□□□□□ -1.99
NEFMP07197 MIR3126-201ENST00000577443 74 ntBASIC2.65□□□□□ -1.99
NEFMP07197 Y_RNA.818-201ENST00000618813 71 ntBASIC2.65□□□□□ -1.99
NEFMP07197 AP006437.1-201ENST00000641440 3685 ntBASIC2.65□□□□□ -1.99
NEFMP07197 SNORD115-34-201ENST00000362441 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-12-201ENST00000362583 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-29-201ENST00000362834 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-9-201ENST00000362912 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-21-201ENST00000362963 81 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-14-201ENST00000363090 81 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-13-201ENST00000363358 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-41-201ENST00000363608 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-11-201ENST00000363616 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-5-201ENST00000363633 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-39-201ENST00000363694 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-4-201ENST00000363810 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-16-201ENST00000363887 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-6-201ENST00000363942 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-42-201ENST00000364273 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 Y_RNA.241-201ENST00000364470 117 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-15-201ENST00000364809 81 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-1-201ENST00000364961 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-26-201ENST00000365067 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-10-201ENST00000365073 81 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-43-201ENST00000365503 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-36-201ENST00000365629 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 MT-TI-201ENST00000387365 69 ntBASIC2.64□□□□□ -1.99
NEFMP07197 AL034345.1-201ENST00000407768 123 ntBASIC2.64□□□□□ -1.99
NEFMP07197 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NEFMP07197 SNORD115-40-201ENST00000606510 82 ntBASIC2.64□□□□□ -1.99
NEFMP07197 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NEFMP07197 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.63□□□□□ -1.99
NEFMP07197 Y_RNA.344-201ENST00000365381 112 ntBASIC2.63□□□□□ -1.99
NEFMP07197 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.63□□□□□ -1.99
NEFMP07197 SNX2P2-201ENST00000424553 323 ntBASIC2.63□□□□□ -1.99
NEFMP07197 RNU6-998P-201ENST00000515894 101 ntBASIC2.63□□□□□ -1.99
NEFMP07197 MIR3935-201ENST00000583472 104 ntBASIC2.63□□□□□ -1.99
NEFMP07197 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.63□□□□□ -1.99
NEFMP07197 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
NEFMP07197 AL442644.1-201ENST00000454390 3105 ntBASIC2.62□□□□□ -1.99
NEFMP07197 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
NEFMP07197 ZNF355P-201ENST00000427301 3216 ntBASIC2.62□□□□□ -1.99
NEFMP07197 RNU6-833P-201ENST00000363486 107 ntBASIC2.62□□□□□ -1.99
NEFMP07197 SNORA51.10-201ENST00000384418 136 ntBASIC2.62□□□□□ -1.99
NEFMP07197 AC015922.2-201ENST00000435593 184 ntBASIC2.62□□□□□ -1.99
NEFMP07197 SNORA31.10-201ENST00000516482 106 ntBASIC2.62□□□□□ -1.99
NEFMP07197 RNU6-158P-201ENST00000517104 100 ntBASIC2.62□□□□□ -1.99
NEFMP07197 RNU6-1116P-201ENST00000517269 99 ntBASIC2.62□□□□□ -1.99
NEFMP07197 MIR5094-201ENST00000578766 85 ntBASIC2.62□□□□□ -1.99
NEFMP07197 MIR4524B-201ENST00000581569 115 ntBASIC2.62□□□□□ -1.99
NEFMP07197 AL162726.3-218ENST00000636401 95 ntBASIC2.62□□□□□ -1.99
NEFMP07197 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NEFMP07197 MIR302B-201ENST00000362188 73 ntBASIC2.61□□□□□ -1.99
NEFMP07197 MIR342-201ENST00000362212 99 ntBASIC2.61□□□□□ -1.99
NEFMP07197 RNU6-294P-201ENST00000364999 102 ntBASIC2.61□□□□□ -1.99
NEFMP07197 RNU6-1104P-201ENST00000384723 104 ntBASIC2.61□□□□□ -1.99
NEFMP07197 HMGN2P39-201ENST00000398005 273 ntBASIC2.61□□□□□ -1.99
NEFMP07197 MIR1912-201ENST00000410389 80 ntBASIC2.61□□□□□ -1.99
NEFMP07197 BX510359.4-201ENST00000423750 193 ntBASIC2.61□□□□□ -1.99
NEFMP07197 HMGN2P19-201ENST00000425149 265 ntBASIC2.61□□□□□ -1.99
NEFMP07197 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.61□□□□□ -1.99
NEFMP07197 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.61□□□□□ -1.99
NEFMP07197 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.61□□□□□ -1.99
NEFMP07197 RNU2-35P-201ENST00000516446 142 ntBASIC2.61□□□□□ -1.99
NEFMP07197 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.61□□□□□ -1.99
NEFMP07197 AC090821.2-201ENST00000523552 176 ntBASIC2.61□□□□□ -1.99
NEFMP07197 AC022523.2-201ENST00000561045 150 ntBASIC2.61□□□□□ -1.99
NEFMP07197 MIR2052-201ENST00000636055 55 ntBASIC2.61□□□□□ -1.99
NEFMP07197 RNU4-16P-201ENST00000364737 141 ntBASIC2.6□□□□□ -1.99
NEFMP07197 AL022718.1-201ENST00000412004 84 ntBASIC2.6□□□□□ -1.99
NEFMP07197 AL445685.2-201ENST00000422551 342 ntBASIC2.6□□□□□ -1.99
NEFMP07197 HMGN2P3-201ENST00000433603 273 ntBASIC2.6□□□□□ -1.99
NEFMP07197 HMGN2P5-201ENST00000436882 273 ntBASIC2.6□□□□□ -1.99
NEFMP07197 AC024614.2-201ENST00000577584 372 ntBASIC2.6□□□□□ -1.99
NEFMP07197 MIR4769-201ENST00000584126 77 ntBASIC2.6□□□□□ -1.99
NEFMP07197 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.6□□□□□ -1.99
NEFMP07197 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NEFMP07197 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NEFMP07197 SNORA63D-201ENST00000364359 132 ntBASIC2.59□□□□□ -1.99
NEFMP07197 SNORA1.2-201ENST00000365189 134 ntBASIC2.59□□□□□ -1.99
NEFMP07197 Y_RNA.558-201ENST00000384685 113 ntBASIC2.59□□□□□ -1.99
NEFMP07197 MIR590-201ENST00000385008 97 ntBASIC2.59□□□□□ -1.99
NEFMP07197 MIR1267-201ENST00000408723 78 ntBASIC2.59□□□□□ -1.99
NEFMP07197 RNA5SP144-201ENST00000410846 116 ntBASIC2.59□□□□□ -1.99
NEFMP07197 HSPE1P9-201ENST00000440046 311 ntBASIC2.59□□□□□ -1.99
NEFMP07197 RPL39P25-201ENST00000449384 154 ntBASIC2.59□□□□□ -1.99
NEFMP07197 AC107297.1-201ENST00000459991 176 ntBASIC2.59□□□□□ -1.99
NEFMP07197 RPL23AP42-201ENST00000471152 471 ntBASIC2.59□□□□□ -1.99
NEFMP07197 AC141557.1-201ENST00000540982 400 ntBASIC2.59□□□□□ -1.99
NEFMP07197 RNU6-1131P-201ENST00000364955 107 ntBASIC2.58□□□□□ -2
NEFMP07197 MIR452-201ENST00000385020 85 ntBASIC2.58□□□□□ -2
NEFMP07197 MIR764-201ENST00000390811 85 ntBASIC2.58□□□□□ -2
NEFMP07197 RNA5SP465-201ENST00000391195 109 ntBASIC2.58□□□□□ -2
NEFMP07197 U8.16-201ENST00000391279 133 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms