Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 SNORD13-201ENST00000459299 104 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 COX6CP6-201ENST00000490840 228 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 SNORA18.7-201ENST00000516910 131 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.05□□□□□ -2.08
ITGB1P05556 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 AL035470.1-201ENST00000622571 220 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 MIR378A-201ENST00000362177 66 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 RNU6-1107P-201ENST00000364817 104 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ITGB1P05556 RNU6-424P-201ENST00000384367 105 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 Y_RNA.495-201ENST00000384435 112 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 RNU6-1031P-201ENST00000384773 107 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 SNORD12C-201ENST00000386307 89 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 MT-TI-201ENST00000387365 69 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ITGB1P05556 AL034345.1-201ENST00000407768 123 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 RPS29P11-201ENST00000496507 171 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 RNU7-70P-201ENST00000516941 66 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 MIR3683-201ENST00000580847 82 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 HSPE1P19-201ENST00000603327 295 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 AC027279.3-201ENST00000625055 122 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.04□□□□□ -2.08
ITGB1P05556 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
ITGB1P05556 MIR342-201ENST00000362212 99 ntBASIC2.03□□□□□ -2.08
ITGB1P05556 Y_RNA.85-201ENST00000363014 111 ntBASIC2.03□□□□□ -2.08
ITGB1P05556 RNU1-133P-201ENST00000364867 167 ntBASIC2.03□□□□□ -2.08
ITGB1P05556 Y_RNA.351-201ENST00000365436 96 ntBASIC2.03□□□□□ -2.08
ITGB1P05556 MIR9-3-201ENST00000385084 90 ntBASIC2.03□□□□□ -2.08
ITGB1P05556 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
ITGB1P05556 RNU6-412P-201ENST00000516434 106 ntBASIC2.03□□□□□ -2.08
ITGB1P05556 RNA5SP481-201ENST00000516814 122 ntBASIC2.03□□□□□ -2.08
ITGB1P05556 AC021443.1-201ENST00000604478 211 ntBASIC2.03□□□□□ -2.08
ITGB1P05556 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
ITGB1P05556 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ITGB1P05556 AL596211.1-201ENST00000569873 2277 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 SNORA63.5-201ENST00000363548 123 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 Y_RNA.198-201ENST00000364013 98 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 RNY1P6-201ENST00000384193 109 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 U8.16-201ENST00000391279 133 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 AL627390.1-201ENST00000396055 340 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 RNU2-7P-201ENST00000410794 178 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 BTF3P4-201ENST00000418852 495 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 SNX2P2-201ENST00000424553 323 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 snoU13.27-201ENST00000459278 104 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 SNORA25.15-201ENST00000516487 89 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 SUMO2P16-201ENST00000519475 264 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 uc_338.20-201ENST00000621563 178 ntBASIC2.02□□□□□ -2.09
ITGB1P05556 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
ITGB1P05556 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.01□□□□□ -2.09
ITGB1P05556 RNU4-16P-201ENST00000364737 141 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 Y_RNA.298-201ENST00000364960 107 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 Y_RNA.309-201ENST00000365046 111 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 RNU6-32P-201ENST00000383948 107 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 RNU6-13P-201ENST00000384248 107 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 SNORD38C-201ENST00000384381 69 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 Y_RNA.494-201ENST00000384432 111 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 RNU6-12P-201ENST00000384604 107 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 RNU6-41P-201ENST00000384741 107 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 U8.17-201ENST00000391292 132 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 MIR1287-201ENST00000408492 90 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 RPL23AP6-201ENST00000446637 472 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 AC087499.4-201ENST00000448505 178 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 AC099513.1-201ENST00000490423 301 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 RNA5SP168-201ENST00000516642 112 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 AC022523.2-201ENST00000561045 150 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 MIR8081-201ENST00000611533 95 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 AC021506.2-201ENST00000612354 169 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 AC084768.2-201ENST00000622736 221 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 AC091932.4-201ENST00000623386 200 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 MIR4679-1-201ENST00000637619 75 ntBASIC2.01□□□□□ -2.09
ITGB1P05556 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ITGB1P05556 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ITGB1P05556 RNU6-661P-201ENST00000362409 107 ntBASIC2□□□□□ -2.09
ITGB1P05556 RNU6-833P-201ENST00000363486 107 ntBASIC2□□□□□ -2.09
ITGB1P05556 RNU6-1104P-201ENST00000384723 104 ntBASIC2□□□□□ -2.09
ITGB1P05556 AC015922.2-201ENST00000435593 184 ntBASIC2□□□□□ -2.09
ITGB1P05556 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2□□□□□ -2.09
ITGB1P05556 RNU7-164P-201ENST00000459221 62 ntBASIC2□□□□□ -2.09
ITGB1P05556 RNU7-123P-201ENST00000515911 60 ntBASIC2□□□□□ -2.09
ITGB1P05556 RNU6-830P-201ENST00000516353 107 ntBASIC2□□□□□ -2.09
ITGB1P05556 SNORA31.17-201ENST00000516953 127 ntBASIC2□□□□□ -2.09
ITGB1P05556 MIR4709-201ENST00000577272 72 ntBASIC2□□□□□ -2.09
ITGB1P05556 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ITGB1P05556 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2□□□□□ -2.09
ITGB1P05556 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2□□□□□ -2.09
ITGB1P05556 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
ITGB1P05556 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
ITGB1P05556 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
ITGB1P05556 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
ITGB1P05556 RNU6-414P-201ENST00000363705 104 ntBASIC1.99□□□□□ -2.09
ITGB1P05556 Y_RNA.241-201ENST00000364470 117 ntBASIC1.99□□□□□ -2.09
ITGB1P05556 Y_RNA.362-201ENST00000365518 110 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 262.9 ms