Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AP003072.1-201ENST00000531740 145 ntBASIC-0.6□□□□□ -2.51
HLA-DQB2P05538 MIR4677-201ENST00000584153 80 ntBASIC-0.6□□□□□ -2.51
HLA-DQB2P05538 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.6□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 SNORD114-28-201ENST00000363610 72 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 RNA5SP245-201ENST00000364239 121 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 SNORD49B-201ENST00000365172 72 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 MIR628-201ENST00000385229 95 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 AL160004.2-201ENST00000432935 350 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 RNU6-911P-201ENST00000516523 104 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 RNU6-264P-201ENST00000517134 104 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 RNU6-897P-201ENST00000517135 105 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 CR383656.4-201ENST00000546909 122 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 U7.6-201ENST00000610841 64 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 uc_338.36-201ENST00000622331 158 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 AL669831.3-213ENST00000636676 183 ntBASIC-0.61□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 RNU6-653P-201ENST00000363074 106 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 MIR181A1-201ENST00000385026 110 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 RNU6-308P-201ENST00000390957 107 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 SNORA75.1-201ENST00000391130 148 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 RNU6-383P-201ENST00000410864 94 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 RPL21P38-201ENST00000418090 167 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 AC108059.2-201ENST00000434626 151 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 RNU7-110P-201ENST00000516891 62 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 AC141846.1-201ENST00000568348 142 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 AC006157.1-201ENST00000611750 366 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 U2.1-201ENST00000618978 145 ntBASIC-0.62□□□□□ -2.51
HLA-DQB2P05538 MIR148A-201ENST00000362215 68 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 SNORA63.5-201ENST00000363548 123 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 RNU6-923P-201ENST00000364753 107 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 SNORA22B-201ENST00000383876 138 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 SNORD24-201ENST00000383884 75 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 RNU6-510P-201ENST00000391239 108 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 RNU4-30P-201ENST00000410245 143 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 SNORD126-201ENST00000459475 77 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 AC138749.4-201ENST00000563970 127 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 MIR378D2-201ENST00000580636 98 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 AC138305.3-201ENST00000624988 240 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 MIR4788-201ENST00000639104 80 ntBASIC-0.63□□□□□ -2.51
HLA-DQB2P05538 MIR302B-201ENST00000362188 73 ntBASIC-0.64□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.64□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.64□□□□□ -2.51
HLA-DQB2P05538 SNORD61-201ENST00000384252 73 ntBASIC-0.64□□□□□ -2.51
HLA-DQB2P05538 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.64□□□□□ -2.51
HLA-DQB2P05538 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.64□□□□□ -2.51
HLA-DQB2P05538 SNORD77.4-201ENST00000516158 81 ntBASIC-0.64□□□□□ -2.51
HLA-DQB2P05538 AC011373.1-201ENST00000607270 237 ntBASIC-0.64□□□□□ -2.51
HLA-DQB2P05538 FTX_2.1-201ENST00000618816 94 ntBASIC-0.64□□□□□ -2.51
HLA-DQB2P05538 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 RNU4-80P-201ENST00000363200 141 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 SNORD115-24-201ENST00000363528 82 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 RNU6-949P-201ENST00000384040 107 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 MTND3P8-201ENST00000412909 339 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 AC096644.2-201ENST00000429278 159 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 AC109327.2-201ENST00000448339 378 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 MIR4662B-201ENST00000579498 81 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 uc_338.28-201ENST00000612082 187 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 AL162726.3-218ENST00000636401 95 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 AC099654.14-201ENST00000638599 341 ntBASIC-0.65□□□□□ -2.51
HLA-DQB2P05538 RNU6-888P-201ENST00000363010 101 ntBASIC-0.66□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.66□□□□□ -2.52
HLA-DQB2P05538 RNU6-144P-201ENST00000383951 107 ntBASIC-0.66□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.66□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.66□□□□□ -2.52
HLA-DQB2P05538 AC245505.1-201ENST00000556398 224 ntBASIC-0.66□□□□□ -2.52
HLA-DQB2P05538 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.66□□□□□ -2.52
HLA-DQB2P05538 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 RNU6-899P-201ENST00000363947 107 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 RNA5SP261-201ENST00000410536 106 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 AF228730.3-201ENST00000436691 102 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 MTATP6P26-201ENST00000445926 662 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 AC100767.1-201ENST00000528178 123 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 DEFB131E-201ENST00000532329 154 ntBASIC-0.67□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.68□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.68□□□□□ -2.52
HLA-DQB2P05538 MIR876-201ENST00000401147 81 ntBASIC-0.68□□□□□ -2.52
HLA-DQB2P05538 HMGN2P22-201ENST00000427588 175 ntBASIC-0.68□□□□□ -2.52
HLA-DQB2P05538 AC010655.3-201ENST00000478818 450 ntBASIC-0.68□□□□□ -2.52
HLA-DQB2P05538 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms