Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SNORD115-9-201ENST00000362912 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-21-201ENST00000362963 81 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-14-201ENST00000363090 81 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 Y_RNA.121-201ENST00000363309 113 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-13-201ENST00000363358 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-41-201ENST00000363608 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-11-201ENST00000363616 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-5-201ENST00000363633 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-39-201ENST00000363694 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-4-201ENST00000363810 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-16-201ENST00000363887 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-6-201ENST00000363942 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 RNA5SP48-201ENST00000363969 126 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-42-201ENST00000364273 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-15-201ENST00000364809 81 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-1-201ENST00000364961 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-26-201ENST00000365067 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-10-201ENST00000365073 81 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-43-201ENST00000365503 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-36-201ENST00000365629 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 Y_RNA.412-201ENST00000384001 104 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORA24-201ENST00000384096 131 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORA51.10-201ENST00000384418 136 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORA26-201ENST00000391286 122 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 RNU6-847P-201ENST00000411115 108 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 AC087499.4-201ENST00000448505 178 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.88□□□□□ -2.27
MT-ND1P03886 Y_RNA.797-201ENST00000515977 94 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 SNORD115-40-201ENST00000606510 82 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 MIR6715A-201ENST00000615929 79 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 AC141273.2-201ENST00000618989 130 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 AC134878.1-201ENST00000619901 243 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 MIR6516-201ENST00000630554 81 ntBASIC0.88□□□□□ -2.27
MT-ND1P03886 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.88□□□□□ -2.27
MT-ND1P03886 RNU6-654P-201ENST00000364373 107 ntBASIC0.87□□□□□ -2.27
MT-ND1P03886 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
MT-ND1P03886 RNU1-36P-201ENST00000365130 165 ntBASIC0.87□□□□□ -2.27
MT-ND1P03886 RNU4-70P-201ENST00000384579 139 ntBASIC0.87□□□□□ -2.27
MT-ND1P03886 SNORA40.5-201ENST00000391061 128 ntBASIC0.87□□□□□ -2.27
MT-ND1P03886 AC090844.1-201ENST00000422019 156 ntBASIC0.87□□□□□ -2.27
MT-ND1P03886 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.87□□□□□ -2.27
MT-ND1P03886 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.87□□□□□ -2.27
MT-ND1P03886 MIR3129-201ENST00000581095 76 ntBASIC0.87□□□□□ -2.27
MT-ND1P03886 AP000942.4-201ENST00000604811 241 ntBASIC0.87□□□□□ -2.27
MT-ND1P03886 AL020996.3-201ENST00000606617 222 ntBASIC0.87□□□□□ -2.27
MT-ND1P03886 RNU6-978P-201ENST00000364371 103 ntBASIC0.86□□□□□ -2.27
MT-ND1P03886 RNU6-275P-201ENST00000364910 107 ntBASIC0.86□□□□□ -2.27
MT-ND1P03886 Y_RNA.330-201ENST00000365230 109 ntBASIC0.86□□□□□ -2.27
MT-ND1P03886 SNORA27-201ENST00000384323 126 ntBASIC0.86□□□□□ -2.27
MT-ND1P03886 RNU6-913P-201ENST00000390913 95 ntBASIC0.86□□□□□ -2.27
MT-ND1P03886 RNA5SP95-201ENST00000410319 137 ntBASIC0.86□□□□□ -2.27
MT-ND1P03886 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.86□□□□□ -2.27
MT-ND1P03886 SNORD124-201ENST00000459577 104 ntBASIC0.86□□□□□ -2.27
MT-ND1P03886 RNU6-958P-201ENST00000516995 106 ntBASIC0.86□□□□□ -2.27
MT-ND1P03886 AC104984.5-201ENST00000586878 94 ntBASIC0.86□□□□□ -2.27
MT-ND1P03886 SEPT14P17-201ENST00000617978 177 ntBASIC0.86□□□□□ -2.27
MT-ND1P03886 Y_RNA.75-201ENST00000362927 97 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 Y_RNA.327-201ENST00000365201 102 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 RNU6-53P-201ENST00000365367 106 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 Y_RNA.435-201ENST00000384095 112 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 Y_RNA.440-201ENST00000384120 114 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 Y_RNA.476-201ENST00000384347 108 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 RNU6-1067P-201ENST00000384752 107 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.85□□□□□ -2.27
MT-ND1P03886 AL138752.1-201ENST00000452964 351 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 RNU7-67P-201ENST00000459003 62 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 RNU6-1219P-201ENST00000516143 112 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 MIR378D2-201ENST00000580636 98 ntBASIC0.85□□□□□ -2.27
MT-ND1P03886 Y_RNA.297-201ENST00000364950 91 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 RNU6-1336P-201ENST00000383886 109 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 RNU6-1189P-201ENST00000383958 107 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 Y_RNA.410-201ENST00000383992 113 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 RNU6-643P-201ENST00000384018 107 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 RNU6-125P-201ENST00000384505 107 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 SNORA79-201ENST00000408376 140 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 Y_RNA.644-201ENST00000459006 113 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 AC107297.1-201ENST00000459991 176 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 RPS29P24-201ENST00000486345 171 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 PDCD5P2-201ENST00000507570 312 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 Y_RNA.674-201ENST00000516362 113 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.84□□□□□ -2.27
MT-ND1P03886 MRPS18CP4-201ENST00000535821 231 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 AC023827.1-201ENST00000569247 97 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 Z83818.1-201ENST00000603584 150 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 snoU13.31-201ENST00000607291 104 ntBASIC0.84□□□□□ -2.27
MT-ND1P03886 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
MT-ND1P03886 RNU6-1020P-201ENST00000363684 107 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 Y_RNA.233-201ENST00000364407 101 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
MT-ND1P03886 RNU6-1190P-201ENST00000410811 104 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 HMGN1P33-201ENST00000432945 451 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 snoU13.16-201ENST00000459350 104 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.83□□□□□ -2.28
MT-ND1P03886 RNU6-138P-201ENST00000515952 107 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 RNU11-2P-201ENST00000516898 142 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 AC036111.3-201ENST00000526389 112 ntBASIC0.83□□□□□ -2.28
MT-ND1P03886 AC131055.1-201ENST00000584626 316 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms