Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU6-155P-201ENST00000516347 100 ntBASIC-0.36□□□□□ -2.47
COL1A1P02452 RNU6-566P-201ENST00000516790 107 ntBASIC-0.36□□□□□ -2.47
COL1A1P02452 RNU7-188P-201ENST00000517063 64 ntBASIC-0.36□□□□□ -2.47
COL1A1P02452 AC055872.1-201ENST00000570978 278 ntBASIC-0.36□□□□□ -2.47
COL1A1P02452 MIR4280-201ENST00000582178 76 ntBASIC-0.36□□□□□ -2.47
COL1A1P02452 MIR4639-201ENST00000584938 69 ntBASIC-0.36□□□□□ -2.47
COL1A1P02452 SNORD115-40-201ENST00000606510 82 ntBASIC-0.36□□□□□ -2.47
COL1A1P02452 MIR6082-201ENST00000613604 109 ntBASIC-0.36□□□□□ -2.47
COL1A1P02452 AC010205.1-201ENST00000616668 449 ntBASIC-0.36□□□□□ -2.47
COL1A1P02452 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 RNU6-455P-201ENST00000384681 107 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 AL603910.2-201ENST00000407268 136 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 SNORD110-201ENST00000408189 75 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 AC074085.1-201ENST00000413598 418 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 RPL39P25-201ENST00000449384 154 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 RNU6-966P-201ENST00000516479 104 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL1A1P02452 AC138749.4-201ENST00000563970 127 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 MIR4473-201ENST00000583731 91 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 AC005014.2-201ENST00000607795 599 ntBASIC-0.37□□□□□ -2.47
COL1A1P02452 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.37□□□□□ -2.47
COL1A1P02452 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
COL1A1P02452 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 RNU6-20P-201ENST00000384106 107 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 MIR876-201ENST00000401147 81 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 RNU7-104P-201ENST00000459398 79 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 RNU6-475P-201ENST00000516073 104 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 RNU7-115P-201ENST00000516433 55 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 RNU7-53P-201ENST00000516705 60 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 RNU6-175P-201ENST00000516896 107 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 AC131281.1-201ENST00000522984 164 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 MIR4441-201ENST00000582623 100 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 MIR4263-201ENST00000584745 83 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 MIR3942-201ENST00000585264 109 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 AC018462.2-201ENST00000605375 395 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 U7.6-201ENST00000610841 64 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 MIR8068-201ENST00000618032 68 ntBASIC-0.38□□□□□ -2.47
COL1A1P02452 RNY4P27-201ENST00000363341 96 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 RNU6-702P-201ENST00000364982 107 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 SNORD83B-201ENST00000386745 93 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 SNORA75.1-201ENST00000391130 148 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 SNORD115-47-201ENST00000391226 86 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.39□□□□□ -2.47
COL1A1P02452 FCF1P4-201ENST00000448326 183 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 RPL7P42-201ENST00000481005 679 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 RNA5SP66-201ENST00000517178 101 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 MIR548AE1-201ENST00000583292 70 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 MIR5704-201ENST00000584029 77 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 MIR6738-201ENST00000619620 64 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 MIR3662-201ENST00000637030 95 ntBASIC-0.39□□□□□ -2.47
COL1A1P02452 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 SNORD116-9-201ENST00000384000 95 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 RNU6-926P-201ENST00000384075 107 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 SNORD116-3-201ENST00000384287 95 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 SNORD116-8-201ENST00000384365 95 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 SNORD116-7-201ENST00000384404 95 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 SNORD116-5-201ENST00000384462 95 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 MIR9-2-201ENST00000384838 87 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 MIR517B-201ENST00000385102 67 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 MIR204-201ENST00000385200 110 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.4□□□□□ -2.47
COL1A1P02452 AC006210.1-201ENST00000424882 111 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 AC024067.1-201ENST00000426199 223 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 MTND4P28-201ENST00000426217 387 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 MTND1P14-201ENST00000427400 950 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 AC109327.2-201ENST00000448339 378 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.4□□□□□ -2.47
COL1A1P02452 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.4□□□□□ -2.47
COL1A1P02452 MIR2053-201ENST00000459295 91 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 RNU6-864P-201ENST00000516256 108 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 RNU7-25P-201ENST00000516544 62 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 RNU6-531P-201ENST00000516694 104 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 RNU6-273P-201ENST00000516937 96 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 AP000676.1-201ENST00000533307 52 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 MIR378D2-201ENST00000580636 98 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 AC005899.2-201ENST00000584353 90 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 MIR4499-201ENST00000584834 69 ntBASIC-0.4□□□□□ -2.47
COL1A1P02452 AC060780.3-201ENST00000589464 80 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms