Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MIR8070-201ENST00000616510 88 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 MIR6513-201ENST00000621188 64 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 AC243829.3-201ENST00000622177 108 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.2□□□□□ -2.38
HLA-DQB1P01920 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 SNORA25.1-201ENST00000362326 128 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.16-201ENST00000362421 102 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 RNU6-484P-201ENST00000384016 107 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 MIR518A1-201ENST00000385068 85 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 SNORD12C-201ENST00000386307 89 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 SNORA26.6-201ENST00000391256 115 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.2□□□□□ -2.38
HLA-DQB1P01920 RNU6-365P-201ENST00000517113 106 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 RNU6-1270P-201ENST00000517128 108 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 AC131281.1-201ENST00000522984 164 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.2□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.802-201ENST00000614892 130 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 AC078938.1-201ENST00000620993 318 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 AC092634.7-201ENST00000621022 103 ntBASIC0.2□□□□□ -2.38
HLA-DQB1P01920 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.19□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.229-201ENST00000364347 113 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 SNORA1.1-201ENST00000364671 133 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 RNU6-1327P-201ENST00000365302 105 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.440-201ENST00000384120 114 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 MIR626-201ENST00000385032 94 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 SNORA53-201ENST00000391141 249 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 AL731563.1-201ENST00000442202 214 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 RNU2-11P-201ENST00000459191 187 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 RNU7-96P-201ENST00000459535 64 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 RNU6-504P-201ENST00000516568 104 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 RNU6-126P-201ENST00000516685 103 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 RNA5SP94-201ENST00000516917 108 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.19□□□□□ -2.38
HLA-DQB1P01920 AC097639.2-201ENST00000603159 172 ntBASIC0.19□□□□□ -2.38
HLA-DQB1P01920 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.19□□□□□ -2.38
HLA-DQB1P01920 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.19□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.19-201ENST00000362462 99 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.24-201ENST00000362508 103 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.91-201ENST00000363042 107 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-1309P-201ENST00000363305 108 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.634-201ENST00000364811 113 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 VTRNA1-3-201ENST00000365645 89 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 SNORA22B-201ENST00000383876 138 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-211P-201ENST00000384047 107 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 MT-TF-201ENST00000387314 71 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-1319P-201ENST00000390855 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-747P-201ENST00000390928 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-679P-201ENST00000391003 106 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 SNORD77.3-201ENST00000391113 65 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-241P-201ENST00000391148 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 MIR548I3-201ENST00000408378 149 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-447P-201ENST00000410293 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-1118P-201ENST00000410382 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-1076P-201ENST00000410397 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-355P-201ENST00000410427 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-791P-201ENST00000410467 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-705P-201ENST00000410601 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-1100P-201ENST00000410691 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-860P-201ENST00000410860 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 SNORA40.8-201ENST00000411034 126 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU2-55P-201ENST00000411146 174 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-1217P-201ENST00000411276 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU6-785P-201ENST00000411324 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 MTATP6P23-201ENST00000440153 476 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 AL138752.1-201ENST00000452964 351 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 RNU7-156P-201ENST00000517214 74 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 MIR4711-201ENST00000578274 70 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 U6.90-201ENST00000614007 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.18□□□□□ -2.38
HLA-DQB1P01920 U6.70-201ENST00000620287 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 MIR376A2-201ENST00000636782 80 ntBASIC0.18□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.64-201ENST00000362845 102 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.84-201ENST00000363011 104 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.410-201ENST00000383992 113 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 RNU6-364P-201ENST00000384387 107 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 SNORA8.3-201ENST00000384679 139 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 SNRPGP12-201ENST00000449481 213 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.17□□□□□ -2.38
HLA-DQB1P01920 SERF1AP1-201ENST00000514575 187 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 SNORA40.15-201ENST00000516884 107 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 RNU6-988P-201ENST00000519081 107 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 MIR3678-201ENST00000578455 94 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 AC113195.1-201ENST00000579952 141 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 MIR4431-201ENST00000579990 94 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 AC037487.3-201ENST00000606668 112 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 AL160413.1-201ENST00000622780 310 ntBASIC0.17□□□□□ -2.38
HLA-DQB1P01920 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.128-201ENST00000363391 112 ntBASIC0.16□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.158-201ENST00000363651 101 ntBASIC0.16□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.210-201ENST00000364161 110 ntBASIC0.16□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.275-201ENST00000364726 110 ntBASIC0.16□□□□□ -2.38
HLA-DQB1P01920 RNU6-740P-201ENST00000364734 105 ntBASIC0.16□□□□□ -2.38
HLA-DQB1P01920 RNU6-514P-201ENST00000384208 107 ntBASIC0.16□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.455-201ENST00000384230 98 ntBASIC0.16□□□□□ -2.38
HLA-DQB1P01920 MIR1257-201ENST00000408490 117 ntBASIC0.16□□□□□ -2.38
HLA-DQB1P01920 AC022028.1-201ENST00000412054 408 ntBASIC0.16□□□□□ -2.38
HLA-DQB1P01920 SNRPGP8-201ENST00000454064 226 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms