Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.16□□□□□ -2.22
CLPTM1O96005 AC005840.1-201ENST00000498412 377 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 RNU7-43P-201ENST00000516554 64 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 MIR4498-201ENST00000577599 66 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 AL365205.2-201ENST00000594586 68 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 AC134878.1-201ENST00000619901 243 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 AC008133.2-201ENST00000624540 351 ntBASIC1.16□□□□□ -2.22
CLPTM1O96005 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CLPTM1O96005 RNU6-1082P-201ENST00000364574 107 ntBASIC1.15□□□□□ -2.23
CLPTM1O96005 Y_RNA.337-201ENST00000365312 102 ntBASIC1.15□□□□□ -2.23
CLPTM1O96005 Y_RNA.393-201ENST00000383936 102 ntBASIC1.15□□□□□ -2.23
CLPTM1O96005 RNU6-209P-201ENST00000384118 107 ntBASIC1.15□□□□□ -2.23
CLPTM1O96005 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.15□□□□□ -2.23
CLPTM1O96005 RPS29P29-201ENST00000456396 171 ntBASIC1.15□□□□□ -2.23
CLPTM1O96005 snoU13.25-201ENST00000458945 104 ntBASIC1.15□□□□□ -2.23
CLPTM1O96005 SNORA18.4-201ENST00000516440 124 ntBASIC1.15□□□□□ -2.23
CLPTM1O96005 AL357312.1-201ENST00000603879 298 ntBASIC1.15□□□□□ -2.23
CLPTM1O96005 snoU13.31-201ENST00000607291 104 ntBASIC1.15□□□□□ -2.23
CLPTM1O96005 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.15□□□□□ -2.23
CLPTM1O96005 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.15□□□□□ -2.23
CLPTM1O96005 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
CLPTM1O96005 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CLPTM1O96005 RNU6-818P-201ENST00000364837 108 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 SNORA1.2-201ENST00000365189 134 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 SNORD116-18-201ENST00000383961 92 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 SNORA70.7-201ENST00000384159 133 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 Y_RNA.542-201ENST00000384641 111 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 MIR1287-201ENST00000408492 90 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.14□□□□□ -2.23
CLPTM1O96005 AC087499.4-201ENST00000448505 178 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 RNU1-123P-201ENST00000458950 160 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 AL157834.3-201ENST00000615543 103 ntBASIC1.14□□□□□ -2.23
CLPTM1O96005 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.14□□□□□ -2.23
CLPTM1O96005 SNORD115-34-201ENST00000362441 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-12-201ENST00000362583 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-29-201ENST00000362834 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-9-201ENST00000362912 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-21-201ENST00000362963 81 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-14-201ENST00000363090 81 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORA25.3-201ENST00000363205 127 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-13-201ENST00000363358 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-41-201ENST00000363608 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-11-201ENST00000363616 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-5-201ENST00000363633 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-39-201ENST00000363694 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-4-201ENST00000363810 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-16-201ENST00000363887 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-6-201ENST00000363942 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-42-201ENST00000364273 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 Y_RNA.226-201ENST00000364337 114 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORA25.7-201ENST00000364375 127 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-15-201ENST00000364809 81 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-1-201ENST00000364961 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-26-201ENST00000365067 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-10-201ENST00000365073 81 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-43-201ENST00000365503 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 RNU6-597P-201ENST00000365620 102 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-36-201ENST00000365629 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 RNU6-1189P-201ENST00000383958 107 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 RNA5SP127-201ENST00000411051 133 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 RPL39P39-201ENST00000455840 151 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 RPS26P48-201ENST00000491713 339 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 RNU7-121P-201ENST00000516604 62 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 MIR5197-201ENST00000583721 112 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 SNORD115-40-201ENST00000606510 82 ntBASIC1.13□□□□□ -2.23
CLPTM1O96005 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CLPTM1O96005 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CLPTM1O96005 MIR342-201ENST00000362212 99 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 RNY1P11-201ENST00000363759 113 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 RNU4-11P-201ENST00000365287 132 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 Y_RNA.410-201ENST00000383992 113 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 SNORA27-201ENST00000384323 126 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 SNORA51.10-201ENST00000384418 136 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 SNORD37.2-201ENST00000391075 66 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 MIR548I3-201ENST00000408378 149 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 MIR548I1-201ENST00000408810 149 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 RNU6-588P-201ENST00000410281 105 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 RNU6-394P-201ENST00000410735 107 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 AC048334.1-201ENST00000477975 159 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 AC004223.1-201ENST00000479840 271 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 MTND5P41-201ENST00000517498 206 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 MIR3144-201ENST00000579460 79 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 DNAJC19P2-201ENST00000593340 302 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 MIR4791-201ENST00000607666 84 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 AC243994.1-201ENST00000618627 109 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 AC021753.1-201ENST00000635724 168 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 MIR4251-201ENST00000635819 61 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 MIR6844-201ENST00000637122 62 ntBASIC1.12□□□□□ -2.23
CLPTM1O96005 Y_RNA.118-201ENST00000363300 101 ntBASIC1.11□□□□□ -2.23
CLPTM1O96005 Y_RNA.180-201ENST00000363867 113 ntBASIC1.11□□□□□ -2.23
CLPTM1O96005 RNU6-1292P-201ENST00000383856 107 ntBASIC1.11□□□□□ -2.23
CLPTM1O96005 Y_RNA.398-201ENST00000383952 99 ntBASIC1.11□□□□□ -2.23
CLPTM1O96005 Y_RNA.440-201ENST00000384120 114 ntBASIC1.11□□□□□ -2.23
CLPTM1O96005 MIR624-201ENST00000385217 97 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms