Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AL049861.1-201ENST00000603130 150 ntBASIC0.25□□□□□ -2.37
MBD3O95983 AL133255.1-201ENST00000606374 441 ntBASIC0.25□□□□□ -2.37
MBD3O95983 MIR8087-201ENST00000612745 78 ntBASIC0.25□□□□□ -2.37
MBD3O95983 AC007485.1-201ENST00000616755 206 ntBASIC0.25□□□□□ -2.37
MBD3O95983 RNU6-888P-201ENST00000363010 101 ntBASIC0.24□□□□□ -2.37
MBD3O95983 RNU6-102P-201ENST00000384485 104 ntBASIC0.24□□□□□ -2.37
MBD3O95983 MIR518F-201ENST00000384973 87 ntBASIC0.24□□□□□ -2.37
MBD3O95983 MIR518A1-201ENST00000385068 85 ntBASIC0.24□□□□□ -2.37
MBD3O95983 MT-TD-201ENST00000387419 68 ntBASIC0.24□□□□□ -2.37
MBD3O95983 MIR1252-201ENST00000408861 65 ntBASIC0.24□□□□□ -2.37
MBD3O95983 SNORA40.8-201ENST00000411034 126 ntBASIC0.24□□□□□ -2.37
MBD3O95983 Y_RNA.639-201ENST00000458981 102 ntBASIC0.24□□□□□ -2.37
MBD3O95983 Y_RNA.631-201ENST00000459607 101 ntBASIC0.24□□□□□ -2.37
MBD3O95983 Y_RNA.702-201ENST00000516843 96 ntBASIC0.24□□□□□ -2.37
MBD3O95983 RNU6-897P-201ENST00000517135 105 ntBASIC0.24□□□□□ -2.37
MBD3O95983 AP003733.2-201ENST00000529409 171 ntBASIC0.24□□□□□ -2.37
MBD3O95983 uc_338.16-201ENST00000621804 95 ntBASIC0.24□□□□□ -2.37
MBD3O95983 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
MBD3O95983 Y_RNA.58-201ENST00000362807 102 ntBASIC0.23□□□□□ -2.37
MBD3O95983 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
MBD3O95983 Y_RNA.154-201ENST00000363624 102 ntBASIC0.23□□□□□ -2.37
MBD3O95983 RNY3P1-201ENST00000365085 102 ntBASIC0.23□□□□□ -2.37
MBD3O95983 RNU6-290P-201ENST00000365212 101 ntBASIC0.23□□□□□ -2.37
MBD3O95983 Y_RNA.431-201ENST00000384086 102 ntBASIC0.23□□□□□ -2.37
MBD3O95983 MIR588-201ENST00000384900 83 ntBASIC0.23□□□□□ -2.37
MBD3O95983 MT-TF-201ENST00000387314 71 ntBASIC0.23□□□□□ -2.37
MBD3O95983 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
MBD3O95983 RNU6-1165P-201ENST00000410119 107 ntBASIC0.23□□□□□ -2.37
MBD3O95983 Y_RNA.602-201ENST00000410535 92 ntBASIC0.23□□□□□ -2.37
MBD3O95983 RNU2-55P-201ENST00000411146 174 ntBASIC0.23□□□□□ -2.37
MBD3O95983 RNU7-185P-201ENST00000459215 60 ntBASIC0.23□□□□□ -2.37
MBD3O95983 RNU7-96P-201ENST00000459535 64 ntBASIC0.23□□□□□ -2.37
MBD3O95983 RNU6-693P-201ENST00000516134 107 ntBASIC0.23□□□□□ -2.37
MBD3O95983 RNU6-504P-201ENST00000516568 104 ntBASIC0.23□□□□□ -2.37
MBD3O95983 RNU6-365P-201ENST00000517113 106 ntBASIC0.23□□□□□ -2.37
MBD3O95983 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.23□□□□□ -2.37
MBD3O95983 AC112487.2-201ENST00000637950 304 ntBASIC0.23□□□□□ -2.37
MBD3O95983 RNU4-73P-201ENST00000363164 141 ntBASIC0.22□□□□□ -2.37
MBD3O95983 SNORA1.1-201ENST00000364671 133 ntBASIC0.22□□□□□ -2.37
MBD3O95983 SNORD42.2-201ENST00000365570 69 ntBASIC0.22□□□□□ -2.37
MBD3O95983 Y_RNA.380-201ENST00000365663 111 ntBASIC0.22□□□□□ -2.37
MBD3O95983 Y_RNA.410-201ENST00000383992 113 ntBASIC0.22□□□□□ -2.37
MBD3O95983 RNU6-364P-201ENST00000384387 107 ntBASIC0.22□□□□□ -2.37
MBD3O95983 MIR548A2-201ENST00000384956 97 ntBASIC0.22□□□□□ -2.37
MBD3O95983 RNU6-823P-201ENST00000391042 103 ntBASIC0.22□□□□□ -2.37
MBD3O95983 Y_RNA.645-201ENST00000391229 102 ntBASIC0.22□□□□□ -2.37
MBD3O95983 SNORA26-201ENST00000391286 122 ntBASIC0.22□□□□□ -2.37
MBD3O95983 RNU6-602P-201ENST00000411155 105 ntBASIC0.22□□□□□ -2.37
MBD3O95983 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.22□□□□□ -2.37
MBD3O95983 PMCHL1-202ENST00000423102 261 ntBASIC0.22□□□□□ -2.37
MBD3O95983 AC015818.7-201ENST00000428754 109 ntBASIC0.22□□□□□ -2.37
MBD3O95983 AC087499.7-201ENST00000441958 109 ntBASIC0.22□□□□□ -2.37
MBD3O95983 AC100767.1-201ENST00000528178 123 ntBASIC0.22□□□□□ -2.37
MBD3O95983 AC037487.3-201ENST00000606668 112 ntBASIC0.22□□□□□ -2.37
MBD3O95983 uc_338.6-201ENST00000613544 171 ntBASIC0.22□□□□□ -2.37
MBD3O95983 AC010332.2-201ENST00000613083 1904 ntBASIC0.21□□□□□ -2.38
MBD3O95983 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
MBD3O95983 Y_RNA.217-201ENST00000364214 105 ntBASIC0.21□□□□□ -2.38
MBD3O95983 RNA5SP517-201ENST00000364724 117 ntBASIC0.21□□□□□ -2.38
MBD3O95983 SNORD77.3-201ENST00000391113 65 ntBASIC0.21□□□□□ -2.38
MBD3O95983 SNORA53-201ENST00000391141 249 ntBASIC0.21□□□□□ -2.38
MBD3O95983 RNA5SP127-201ENST00000411051 133 ntBASIC0.21□□□□□ -2.38
MBD3O95983 SNORD71-201ENST00000411292 86 ntBASIC0.21□□□□□ -2.38
MBD3O95983 RNU7-102P-201ENST00000458948 62 ntBASIC0.21□□□□□ -2.38
MBD3O95983 Y_RNA.641-201ENST00000459414 105 ntBASIC0.21□□□□□ -2.38
MBD3O95983 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.21□□□□□ -2.38
MBD3O95983 SNORA25.12-201ENST00000516202 82 ntBASIC0.21□□□□□ -2.38
MBD3O95983 SNORA27.4-201ENST00000516650 95 ntBASIC0.21□□□□□ -2.38
MBD3O95983 AC022523.2-201ENST00000561045 150 ntBASIC0.21□□□□□ -2.38
MBD3O95983 RAC1P9-201ENST00000604990 392 ntBASIC0.21□□□□□ -2.38
MBD3O95983 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
MBD3O95983 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.21□□□□□ -2.38
MBD3O95983 SNORD118-201ENST00000363593 134 ntBASIC0.2□□□□□ -2.38
MBD3O95983 Y_RNA.276-201ENST00000364732 109 ntBASIC0.2□□□□□ -2.38
MBD3O95983 SNORD61-201ENST00000384252 73 ntBASIC0.2□□□□□ -2.38
MBD3O95983 MIR1257-201ENST00000408490 117 ntBASIC0.2□□□□□ -2.38
MBD3O95983 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.2□□□□□ -2.38
MBD3O95983 RNA5SP94-201ENST00000516917 108 ntBASIC0.2□□□□□ -2.38
MBD3O95983 RNU7-156P-201ENST00000517214 74 ntBASIC0.2□□□□□ -2.38
MBD3O95983 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.2□□□□□ -2.38
MBD3O95983 Y_RNA.802-201ENST00000614892 130 ntBASIC0.2□□□□□ -2.38
MBD3O95983 AC078938.1-201ENST00000620993 318 ntBASIC0.2□□□□□ -2.38
MBD3O95983 Y_RNA.293-201ENST00000364908 93 ntBASIC0.19□□□□□ -2.38
MBD3O95983 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.19□□□□□ -2.38
MBD3O95983 RNU6-998P-201ENST00000515894 101 ntBASIC0.19□□□□□ -2.38
MBD3O95983 RNU6-507P-201ENST00000516045 100 ntBASIC0.19□□□□□ -2.38
MBD3O95983 RNU6-397P-201ENST00000516226 104 ntBASIC0.19□□□□□ -2.38
MBD3O95983 AP003327.1-201ENST00000529684 127 ntBASIC0.19□□□□□ -2.38
MBD3O95983 MIR4431-201ENST00000579990 94 ntBASIC0.19□□□□□ -2.38
MBD3O95983 MIR548S-201ENST00000581352 82 ntBASIC0.19□□□□□ -2.38
MBD3O95983 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
MBD3O95983 MIR4795-201ENST00000584182 89 ntBASIC0.19□□□□□ -2.38
MBD3O95983 AC023932.2-201ENST00000603176 175 ntBASIC0.19□□□□□ -2.38
MBD3O95983 AC008608.1-201ENST00000603910 127 ntBASIC0.19□□□□□ -2.38
MBD3O95983 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.19□□□□□ -2.38
MBD3O95983 UBE2WP1-201ENST00000362030 340 ntBASIC0.18□□□□□ -2.38
MBD3O95983 MIR103A1-201ENST00000362165 78 ntBASIC0.18□□□□□ -2.38
MBD3O95983 MIR30D-201ENST00000362283 70 ntBASIC0.18□□□□□ -2.38
MBD3O95983 SNORA25.1-201ENST00000362326 128 ntBASIC0.18□□□□□ -2.38
MBD3O95983 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 888.2 ms