Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SNORA18.4-201ENST00000516440 124 ntBASIC0.69□□□□□ -2.3
GGPS1O95749 Y_RNA.701-201ENST00000516812 110 ntBASIC0.69□□□□□ -2.3
GGPS1O95749 SCARNA24.2-201ENST00000516968 130 ntBASIC0.69□□□□□ -2.3
GGPS1O95749 RNU6-365P-201ENST00000517113 106 ntBASIC0.69□□□□□ -2.3
GGPS1O95749 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.69□□□□□ -2.3
GGPS1O95749 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.69□□□□□ -2.3
GGPS1O95749 Y_RNA.36-201ENST00000362602 112 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 Y_RNA.37-201ENST00000362606 108 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 RNU6-888P-201ENST00000363010 101 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 RNU6-639P-201ENST00000384074 107 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 RNU6-1289P-201ENST00000384431 106 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 MIR936-201ENST00000401264 98 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 AC090844.1-201ENST00000422019 156 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 AC100767.1-201ENST00000528178 123 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 AP003484.1-201ENST00000530974 250 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 AC004817.2-201ENST00000561794 651 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 AC011195.1-201ENST00000578177 177 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 RN7SL793P-201ENST00000583259 296 ntBASIC0.68□□□□□ -2.3
GGPS1O95749 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.68□□□□□ -2.3
GGPS1O95749 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
GGPS1O95749 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
GGPS1O95749 Y_RNA.24-201ENST00000362508 103 ntBASIC0.67□□□□□ -2.3
GGPS1O95749 SNORD61-201ENST00000384252 73 ntBASIC0.67□□□□□ -2.3
GGPS1O95749 MIR626-201ENST00000385032 94 ntBASIC0.67□□□□□ -2.3
GGPS1O95749 snoU13.21-201ENST00000459368 105 ntBASIC0.67□□□□□ -2.3
GGPS1O95749 RNU6-958P-201ENST00000516995 106 ntBASIC0.67□□□□□ -2.3
GGPS1O95749 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
GGPS1O95749 SNORA27-201ENST00000384323 126 ntBASIC0.66□□□□□ -2.3
GGPS1O95749 Y_RNA.572-201ENST00000384757 98 ntBASIC0.66□□□□□ -2.3
GGPS1O95749 RNU6-504P-201ENST00000516568 104 ntBASIC0.66□□□□□ -2.3
GGPS1O95749 RNU7-53P-201ENST00000516705 60 ntBASIC0.66□□□□□ -2.3
GGPS1O95749 RNU6-570P-201ENST00000517051 105 ntBASIC0.66□□□□□ -2.3
GGPS1O95749 AC044792.1-201ENST00000593294 196 ntBASIC0.66□□□□□ -2.3
GGPS1O95749 Y_RNA.44-201ENST00000362676 108 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 SNORA63C-201ENST00000364578 129 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 RNU6-934P-201ENST00000365154 107 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 RNY1P4-201ENST00000384595 115 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 SNORA26-201ENST00000391286 122 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 RNU2-55P-201ENST00000411146 174 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 SNORD83.1-201ENST00000411362 77 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 AC244023.1-201ENST00000426884 112 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 RPS29P24-201ENST00000486345 171 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 SNORD36C-201ENST00000516733 66 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 RNU6-1270P-201ENST00000517128 108 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 AC242498.1-201ENST00000604134 111 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 AP001282.2-201ENST00000616149 309 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 Z97988.1-201ENST00000637697 135 ntBASIC0.65□□□□□ -2.31
GGPS1O95749 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.64□□□□□ -2.31
GGPS1O95749 Y_RNA.66-201ENST00000362862 102 ntBASIC0.64□□□□□ -2.31
GGPS1O95749 Y_RNA.117-201ENST00000363294 101 ntBASIC0.64□□□□□ -2.31
GGPS1O95749 RNU6-1227P-201ENST00000383981 107 ntBASIC0.64□□□□□ -2.31
GGPS1O95749 RNY3P5-201ENST00000384127 102 ntBASIC0.64□□□□□ -2.31
GGPS1O95749 RNU6-913P-201ENST00000390913 95 ntBASIC0.64□□□□□ -2.31
GGPS1O95749 RNU7-62P-201ENST00000458856 62 ntBASIC0.64□□□□□ -2.31
GGPS1O95749 TRBVB-201ENST00000477100 408 ntBASIC0.64□□□□□ -2.31
GGPS1O95749 RNU6-1299P-201ENST00000516316 100 ntBASIC0.64□□□□□ -2.31
GGPS1O95749 MIR8055-201ENST00000610739 97 ntBASIC0.64□□□□□ -2.31
GGPS1O95749 MIR6779-201ENST00000617283 64 ntBASIC0.64□□□□□ -2.31
GGPS1O95749 RNU6-484P-201ENST00000384016 107 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 SNORD38B-201ENST00000384690 67 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 RNU6-1109P-201ENST00000391187 107 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 RNA5SP193-201ENST00000410353 107 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 AC092628.1-201ENST00000436250 252 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 SNORD2.1-201ENST00000458762 69 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.63□□□□□ -2.31
GGPS1O95749 MIR4771-2-201ENST00000577758 74 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 MIR4711-201ENST00000578274 70 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 MIR4771-1-201ENST00000582617 74 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 SNORD38B-202ENST00000625943 69 ntBASIC0.63□□□□□ -2.31
GGPS1O95749 Y_RNA.82-201ENST00000363000 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 Y_RNA.92-201ENST00000363043 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 Y_RNA.235-201ENST00000364412 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 Y_RNA.237-201ENST00000364439 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 Y_RNA.306-201ENST00000365015 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 Y_RNA.312-201ENST00000365089 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 Y_RNA.322-201ENST00000365151 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 RNU6-713P-201ENST00000384761 107 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 MIR520F-201ENST00000384824 87 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 MIR573-201ENST00000384964 99 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 RNA5SP222-201ENST00000411039 105 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 Y_RNA.650-201ENST00000459002 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 RNU6-977P-201ENST00000516411 103 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 RNA5SP153-201ENST00000516498 76 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 Y_RNA.777-201ENST00000516982 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 Y_RNA.771-201ENST00000598668 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 U2.14-201ENST00000615943 113 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 Y_RNA.789-201ENST00000622480 102 ntBASIC0.62□□□□□ -2.31
GGPS1O95749 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
GGPS1O95749 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
GGPS1O95749 RNU6-740P-201ENST00000364734 105 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 Y_RNA.634-201ENST00000364811 113 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 MIR520H-201ENST00000385126 88 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 RNU6-177P-201ENST00000411257 104 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 RNU7-96P-201ENST00000459535 64 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
GGPS1O95749 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms